Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201009

Identifier: 87201009

GI number: 87201009

Start: 3214235

End: 3215596

Strand: Reverse

Name: 87201009

Synonym: Saro_2997

Alternate gene names: NA

Gene position: 3215596-3214235 (Counterclockwise)

Preceding gene: 87201010

Following gene: 87201008

Centisome position: 90.29

GC content: 61.82

Gene sequence:

>1362_bases
ATGCAGGTTCCCGTCCTCTCGGGGATGACCGCCCGCGAGGGTTCGTTCGCGGCATCCTTCCCGATCAACCTTGAGCCTCG
CACGTTCACAAGCGGTGTTTCGCAGGGCCAGCTTGTCACGACGCGCGGGGCATCCGTGCGGGTCACGGGCCTGCCGGGAG
TGGATCGTGGCGGCACCGTGTGGAACGGGATGCACTACCGCGTGATGGGCGAATACCTCGTCCAGGTGGCTGCGGACTGG
ACCGTTACGGTGATCGGCAGCGTAGGAAATGACTTCCGCGCCGTTGGCTTCGATTACGGCTTCGACCGGCTCGCCATCCG
AAGCGCGGATCGGCTGTTCTACTACAATGGTGCATCCCTGACGCAGGTGACGGACCCGGACCTTGGCGCGGTCAAGGACA
TGGTGTGGTCCGATGGCTACTATGTGACCACGGACGGCACCTATATCGTCGTGACCAACCTGACCGATCCGACCGCAATC
GACCCGATCAAGTACGGTTCGGCGGAAGAAGACCCCGACATGATTACGGGCCTCCTGCGCTTCCGCGAGGAAATTTATGC
GATCGGTCGCAACTCCATACAGGTATTCCAGAACGTCGGCGGCAGCGGCTTCCCGTTCCAGAATACGCCCGGAGCCACTA
TCCCTTACGGCTGCATTTCGTCCTCGGCAAAGTGCATGGTGGGCGGGACATTCGCTTTCGTCGGCGGCGCGCGTGACGAA
CCCCTGAGCGTCTATATCGAGAACGGCGGCGGGGCACTGCGCATTTCCAACCGGGAAGTTGACGACCTCCTGAATGCCGA
AGCCTCTCCCGAGCTTATCGAGCTTGAGGCGCGGGTGTTTGGCGAAGAGCGCCAGTTGCTCATCCATTTGCAGGACAAGA
CGCTGGGCATCGCCTTGGGAACGTCCACGGAAGGTGAGCAAGGGGCATGGTTCATCCTGCAATCAGGCAGGGGTGAGCCA
TACCGCCTGCGCCATGCAGTGTGGTGCTATGGACAGCATATCGTAGGCGACACGCAGAACGCGCAGCTTGGCGTCCTGTC
GTCTGATGACCGGCATTTCGGGGACCGTCCGGACTGGCAGTTCGATGCCTCGCTGCTGTTCAACGATGGTGCAGCCTTCC
TCGTGAACGATGTCGAGTTGTTCGGGCAATTCCCCACCGAGGAACATGCCGTGTTCCTGTCCATGAGCCGTGATGCGACG
GTCTATAGCCGTGAAGTCTCGCGGCGCATGACCGGGCGGCGTGACGAGCGGTTGCGCTGGCAGGTGGGCGTAAGGTGCCC
GACGCTGGTATCCTTCCGGTTCCGTGGGCAGGGGCGCTATGCGATCAGCCGGTGTGAAATGAACGGTGAACCCCTTGGCT
AG

Upstream 100 bases:

>100_bases
TGGGCAACAAGTCCACCGTCACCTATCCGAACAACACGCCCGCTGGCGCTGGTCAGGGCCGCTCATTGGGCTTCGGCGCG
TTCTTCCGGGACGGTGACTG

Downstream 100 bases:

>100_bases
CTTCTTCATCCGCCGCGAGGTGCTGGAGCGCATCTTCGGTAAGCGCTGGGGCCTTGCCTTCGAGAACCAGCAACAGACGC
TTGCCACGGTATCGGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MQVPVLSGMTAREGSFAASFPINLEPRTFTSGVSQGQLVTTRGASVRVTGLPGVDRGGTVWNGMHYRVMGEYLVQVAADW
TVTVIGSVGNDFRAVGFDYGFDRLAIRSADRLFYYNGASLTQVTDPDLGAVKDMVWSDGYYVTTDGTYIVVTNLTDPTAI
DPIKYGSAEEDPDMITGLLRFREEIYAIGRNSIQVFQNVGGSGFPFQNTPGATIPYGCISSSAKCMVGGTFAFVGGARDE
PLSVYIENGGGALRISNREVDDLLNAEASPELIELEARVFGEERQLLIHLQDKTLGIALGTSTEGEQGAWFILQSGRGEP
YRLRHAVWCYGQHIVGDTQNAQLGVLSSDDRHFGDRPDWQFDASLLFNDGAAFLVNDVELFGQFPTEEHAVFLSMSRDAT
VYSREVSRRMTGRRDERLRWQVGVRCPTLVSFRFRGQGRYAISRCEMNGEPLG

Sequences:

>Translated_453_residues
MQVPVLSGMTAREGSFAASFPINLEPRTFTSGVSQGQLVTTRGASVRVTGLPGVDRGGTVWNGMHYRVMGEYLVQVAADW
TVTVIGSVGNDFRAVGFDYGFDRLAIRSADRLFYYNGASLTQVTDPDLGAVKDMVWSDGYYVTTDGTYIVVTNLTDPTAI
DPIKYGSAEEDPDMITGLLRFREEIYAIGRNSIQVFQNVGGSGFPFQNTPGATIPYGCISSSAKCMVGGTFAFVGGARDE
PLSVYIENGGGALRISNREVDDLLNAEASPELIELEARVFGEERQLLIHLQDKTLGIALGTSTEGEQGAWFILQSGRGEP
YRLRHAVWCYGQHIVGDTQNAQLGVLSSDDRHFGDRPDWQFDASLLFNDGAAFLVNDVELFGQFPTEEHAVFLSMSRDAT
VYSREVSRRMTGRRDERLRWQVGVRCPTLVSFRFRGQGRYAISRCEMNGEPLG
>Mature_453_residues
MQVPVLSGMTAREGSFAASFPINLEPRTFTSGVSQGQLVTTRGASVRVTGLPGVDRGGTVWNGMHYRVMGEYLVQVAADW
TVTVIGSVGNDFRAVGFDYGFDRLAIRSADRLFYYNGASLTQVTDPDLGAVKDMVWSDGYYVTTDGTYIVVTNLTDPTAI
DPIKYGSAEEDPDMITGLLRFREEIYAIGRNSIQVFQNVGGSGFPFQNTPGATIPYGCISSSAKCMVGGTFAFVGGARDE
PLSVYIENGGGALRISNREVDDLLNAEASPELIELEARVFGEERQLLIHLQDKTLGIALGTSTEGEQGAWFILQSGRGEP
YRLRHAVWCYGQHIVGDTQNAQLGVLSSDDRHFGDRPDWQFDASLLFNDGAAFLVNDVELFGQFPTEEHAVFLSMSRDAT
VYSREVSRRMTGRRDERLRWQVGVRCPTLVSFRFRGQGRYAISRCEMNGEPLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49772; Mature: 49772

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVPVLSGMTAREGSFAASFPINLEPRTFTSGVSQGQLVTTRGASVRVTGLPGVDRGGTV
CCCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCE
WNGMHYRVMGEYLVQVAADWTVTVIGSVGNDFRAVGFDYGFDRLAIRSADRLFYYNGASL
ECCEEEEHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCEEEEECCCEEEEECCCEE
TQVTDPDLGAVKDMVWSDGYYVTTDGTYIVVTNLTDPTAIDPIKYGSAEEDPDMITGLLR
EEECCCCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
FREEIYAIGRNSIQVFQNVGGSGFPFQNTPGATIPYGCISSSAKCMVGGTFAFVGGARDE
HHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEEEEECCCCCC
PLSVYIENGGGALRISNREVDDLLNAEASPELIELEARVFGEERQLLIHLQDKTLGIALG
CEEEEEECCCCEEEECCCCHHHHHCCCCCCCEEEEEEHHCCCCEEEEEEEECCEEEEEEC
TSTEGEQGAWFILQSGRGEPYRLRHAVWCYGQHIVGDTQNAQLGVLSSDDRHFGDRPDWQ
CCCCCCCCEEEEEECCCCCCEEEEEEEEEECCEEECCCCCCEEEEEECCCCCCCCCCCCE
FDASLLFNDGAAFLVNDVELFGQFPTEEHAVFLSMSRDATVYSREVSRRMTGRRDERLRW
EEEEEEEECCCEEEEEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE
QVGVRCPTLVSFRFRGQGRYAISRCEMNGEPLG
EECCCCCEEEEEEECCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MQVPVLSGMTAREGSFAASFPINLEPRTFTSGVSQGQLVTTRGASVRVTGLPGVDRGGTV
CCCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCE
WNGMHYRVMGEYLVQVAADWTVTVIGSVGNDFRAVGFDYGFDRLAIRSADRLFYYNGASL
ECCEEEEHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCEEEEECCCEEEEECCCEE
TQVTDPDLGAVKDMVWSDGYYVTTDGTYIVVTNLTDPTAIDPIKYGSAEEDPDMITGLLR
EEECCCCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
FREEIYAIGRNSIQVFQNVGGSGFPFQNTPGATIPYGCISSSAKCMVGGTFAFVGGARDE
HHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEEEEECCCCCC
PLSVYIENGGGALRISNREVDDLLNAEASPELIELEARVFGEERQLLIHLQDKTLGIALG
CEEEEEECCCCEEEECCCCHHHHHCCCCCCCEEEEEEHHCCCCEEEEEEEECCEEEEEEC
TSTEGEQGAWFILQSGRGEPYRLRHAVWCYGQHIVGDTQNAQLGVLSSDDRHFGDRPDWQ
CCCCCCCCEEEEEECCCCCCEEEEEEEEEECCEEECCCCCCEEEEEECCCCCCCCCCCCE
FDASLLFNDGAAFLVNDVELFGQFPTEEHAVFLSMSRDATVYSREVSRRMTGRRDERLRW
EEEEEEEECCCEEEEEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE
QVGVRCPTLVSFRFRGQGRYAISRCEMNGEPLG
EECCCCCEEEEEEECCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA