| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201008
Identifier: 87201008
GI number: 87201008
Start: 3213730
End: 3214242
Strand: Reverse
Name: 87201008
Synonym: Saro_2996
Alternate gene names: NA
Gene position: 3214242-3213730 (Counterclockwise)
Preceding gene: 87201009
Following gene: 87201007
Centisome position: 90.25
GC content: 63.74
Gene sequence:
>513_bases TTGGCTAGCTTCTTCATCCGCCGCGAGGTGCTGGAGCGCATCTTCGGTAAGCGCTGGGGCCTTGCCTTCGAGAACCAGCA ACAGACGCTTGCCACGGTATCGGAGGCGTCCTCGCTGGCCGTCAGTGCCACGCAGGCGCTCAAGGACGCGGCATTCGTCA CGCTGTCGAGCAATGCGGAGCTTCCGAACGAACGTGTCCTGCAACTCGGTGACGGGCTGGAGGCGGTAATCAGCTCTGAT ACCGTCCTGATCCGCCTGAGCGAGGACGGCGCGCGGGCCTCGGGCGGGTTCAAGGTGACATTCATTGCCACGGGCGAAAG CACGGTTGCCGTACCGCTATCCGGCATCCTGGCGACGCGCGAGAACGTCGAGACGCTGACCAACAAGACGCTGTCCGCAC CGTCGTTATCGGGGTTGGTGAACGCGACGAGCGATGCAAATGCTGCCTCTGCCGGCGTTCCCGTTGGCGGTGTCTACCGG GACGGCTCAAGCCTGAAGGTTCGGGTGGCGTAA
Upstream 100 bases:
>100_bases CGCTGGCAGGTGGGCGTAAGGTGCCCGACGCTGGTATCCTTCCGGTTCCGTGGGCAGGGGCGCTATGCGATCAGCCGGTG TGAAATGAACGGTGAACCCC
Downstream 100 bases:
>100_bases GACCCGTAAAATAGCCGATTTCCCGCATAACAGCGAAAGTGCGCGCGTCTGGACATTTGCGCGCAGGAGGCTGTCATCGG CCTGTTTTCTTTCGTTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MASFFIRREVLERIFGKRWGLAFENQQQTLATVSEASSLAVSATQALKDAAFVTLSSNAELPNERVLQLGDGLEAVISSD TVLIRLSEDGARASGGFKVTFIATGESTVAVPLSGILATRENVETLTNKTLSAPSLSGLVNATSDANAASAGVPVGGVYR DGSSLKVRVA
Sequences:
>Translated_170_residues MASFFIRREVLERIFGKRWGLAFENQQQTLATVSEASSLAVSATQALKDAAFVTLSSNAELPNERVLQLGDGLEAVISSD TVLIRLSEDGARASGGFKVTFIATGESTVAVPLSGILATRENVETLTNKTLSAPSLSGLVNATSDANAASAGVPVGGVYR DGSSLKVRVA >Mature_169_residues ASFFIRREVLERIFGKRWGLAFENQQQTLATVSEASSLAVSATQALKDAAFVTLSSNAELPNERVLQLGDGLEAVISSDT VLIRLSEDGARASGGFKVTFIATGESTVAVPLSGILATRENVETLTNKTLSAPSLSGLVNATSDANAASAGVPVGGVYRD GSSLKVRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17674; Mature: 17543
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFFIRREVLERIFGKRWGLAFENQQQTLATVSEASSLAVSATQALKDAAFVTLSSNAE CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC LPNERVLQLGDGLEAVISSDTVLIRLSEDGARASGGFKVTFIATGESTVAVPLSGILATR CCHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEHHHHHHCH ENVETLTNKTLSAPSLSGLVNATSDANAASAGVPVGGVYRDGSSLKVRVA HHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCEEEEEC >Mature Secondary Structure ASFFIRREVLERIFGKRWGLAFENQQQTLATVSEASSLAVSATQALKDAAFVTLSSNAE CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC LPNERVLQLGDGLEAVISSDTVLIRLSEDGARASGGFKVTFIATGESTVAVPLSGILATR CCHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEHHHHHHCH ENVETLTNKTLSAPSLSGLVNATSDANAASAGVPVGGVYRDGSSLKVRVA HHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA