Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200999

Identifier: 87200999

GI number: 87200999

Start: 3202684

End: 3203901

Strand: Reverse

Name: 87200999

Synonym: Saro_2987

Alternate gene names: NA

Gene position: 3203901-3202684 (Counterclockwise)

Preceding gene: 87201000

Following gene: 87200997

Centisome position: 89.96

GC content: 61.74

Gene sequence:

>1218_bases
ATGTCGGTTGACCCGAAGCTTCTCGACTACTGCAACACCGACCACCAGCGCCAGATAATGCAGCGGCTTATCGCTGGTGA
CAGCGGGGCGGAAATTGCTCGGGACATGGGCGTCCATCGCACCCTTCCGGACAAGGTGCGACGGCGGGTTCTGGAATACG
CGGCACGGCAGGGATATGCGCCGGAAGCGGGAATTGACCATCCTGTAGCCGAGGGGTTCGAGCTTCGCGGCTACTCCCAT
TTCACCAAGACGGCAGCGGGGGAGCCGATCTGGCTCAAGACCCGCGCAGCCGAACGGGCATACTGGCAGGGCATTCAAGG
CGCTATCGACGGTGTGCAGCCGGTTGATGCCGCCATCCTTGCGATACCGCCCGAACCGCAATCAGACATCATCCCATGGC
TGCAAATCGGTGACGCGCACATTGGCATGTTGGCGTCGGAAGAGGAAACCGGCGCGAACTTCGATATCAGCATTGCCGAG
CGGGAGATATGCGCTGCTGCGGCGGCGTTGATCGATGCGGCACCGGCCTGCGAGCGGCTTGTCATCAACGACCTTGGCGA
CGGCACCCATTACGAAACGTTCAAGGCGGAAACCGAAGCCAGCGGCCATAGGGTGGATCAGGACACCCGCTATTGGAAGA
TGGTGCAAGCCTATATCCGGATCACCCGGTTTATCGTGGAGCGGGCGCTCACGAAGGCCCGCACGGTCGATTACATCGCC
AATCAGGGCAATCATTCCCGGTCCAATGATATCTGGATCGCGGCGCTCATTGGCGCGCTCTACGAGGCCACAGGGCGCGT
CAACGTCCTGCGCAACGAAAGCCCGTTTATTGCCTACCGGATGGGCCGGACCTTCGTCATGGTTCACCACGGCGACAAGG
CCAAGCCCGAAGCCTGCGCCAAGCTCATGTCGGACGATTACGCTGTCGATTGGGGCGAGACAGTCTTCCGGTACATCGAC
GGTGGGCACGTACACCACAGCCAGCGCAAAGAGCTTCCCGGCTGTCTGTTCGAGAGCTGGAACAACCTCGCACCGCGCGA
CAAGTACGCACACGACGGCGGATGGCGCTCGAAGCAGTGCATGACGCTGGTCCTGCGGTCACGGAACTACGGCGAGACGG
CCCGGATCGTGATGCCCATCGAGCGGGTGCGTGACCTGATCCGCGCCAAGCAGCCTGACCACTACGTTCCACCGGCAATG
AGGGCGTTCGCAGCATGA

Upstream 100 bases:

>100_bases
TGCCTGCAATCGCTTCCGTGCTGACGATCATCTGGACCGCTATCAGAATAGTCGAGACGGATACCGTGCAGCGCCTCCTT
GGCAAGAAATAGGAGGCCGC

Downstream 100 bases:

>100_bases
ACCCTGACGCATACCTGTTCTGGCTTGGCGCAGATGCGGAGCAAGCCTTTTGGGAAGCCTTGCAGGACTGCGGGGTAATC
GAGGTCGATCTAGCGGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSVDPKLLDYCNTDHQRQIMQRLIAGDSGAEIARDMGVHRTLPDKVRRRVLEYAARQGYAPEAGIDHPVAEGFELRGYSH
FTKTAAGEPIWLKTRAAERAYWQGIQGAIDGVQPVDAAILAIPPEPQSDIIPWLQIGDAHIGMLASEEETGANFDISIAE
REICAAAAALIDAAPACERLVINDLGDGTHYETFKAETEASGHRVDQDTRYWKMVQAYIRITRFIVERALTKARTVDYIA
NQGNHSRSNDIWIAALIGALYEATGRVNVLRNESPFIAYRMGRTFVMVHHGDKAKPEACAKLMSDDYAVDWGETVFRYID
GGHVHHSQRKELPGCLFESWNNLAPRDKYAHDGGWRSKQCMTLVLRSRNYGETARIVMPIERVRDLIRAKQPDHYVPPAM
RAFAA

Sequences:

>Translated_405_residues
MSVDPKLLDYCNTDHQRQIMQRLIAGDSGAEIARDMGVHRTLPDKVRRRVLEYAARQGYAPEAGIDHPVAEGFELRGYSH
FTKTAAGEPIWLKTRAAERAYWQGIQGAIDGVQPVDAAILAIPPEPQSDIIPWLQIGDAHIGMLASEEETGANFDISIAE
REICAAAAALIDAAPACERLVINDLGDGTHYETFKAETEASGHRVDQDTRYWKMVQAYIRITRFIVERALTKARTVDYIA
NQGNHSRSNDIWIAALIGALYEATGRVNVLRNESPFIAYRMGRTFVMVHHGDKAKPEACAKLMSDDYAVDWGETVFRYID
GGHVHHSQRKELPGCLFESWNNLAPRDKYAHDGGWRSKQCMTLVLRSRNYGETARIVMPIERVRDLIRAKQPDHYVPPAM
RAFAA
>Mature_404_residues
SVDPKLLDYCNTDHQRQIMQRLIAGDSGAEIARDMGVHRTLPDKVRRRVLEYAARQGYAPEAGIDHPVAEGFELRGYSHF
TKTAAGEPIWLKTRAAERAYWQGIQGAIDGVQPVDAAILAIPPEPQSDIIPWLQIGDAHIGMLASEEETGANFDISIAER
EICAAAAALIDAAPACERLVINDLGDGTHYETFKAETEASGHRVDQDTRYWKMVQAYIRITRFIVERALTKARTVDYIAN
QGNHSRSNDIWIAALIGALYEATGRVNVLRNESPFIAYRMGRTFVMVHHGDKAKPEACAKLMSDDYAVDWGETVFRYIDG
GHVHHSQRKELPGCLFESWNNLAPRDKYAHDGGWRSKQCMTLVLRSRNYGETARIVMPIERVRDLIRAKQPDHYVPPAMR
AFAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45440; Mature: 45309

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDPKLLDYCNTDHQRQIMQRLIAGDSGAEIARDMGVHRTLPDKVRRRVLEYAARQGYA
CCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PEAGIDHPVAEGFELRGYSHFTKTAAGEPIWLKTRAAERAYWQGIQGAIDGVQPVDAAIL
CCCCCCCCHHCCEECCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEE
AIPPEPQSDIIPWLQIGDAHIGMLASEEETGANFDISIAEREICAAAAALIDAAPACERL
EECCCCCCCCCCCEEECCCHHEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHCHHHHHH
VINDLGDGTHYETFKAETEASGHRVDQDTRYWKMVQAYIRITRFIVERALTKARTVDYIA
HHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQGNHSRSNDIWIAALIGALYEATGRVNVLRNESPFIAYRMGRTFVMVHHGDKAKPEACA
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCEEEEEECCCCCCHHHHH
KLMSDDYAVDWGETVFRYIDGGHVHHSQRKELPGCLFESWNNLAPRDKYAHDGGWRSKQC
HHHCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHH
MTLVLRSRNYGETARIVMPIERVRDLIRAKQPDHYVPPAMRAFAA
HHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
SVDPKLLDYCNTDHQRQIMQRLIAGDSGAEIARDMGVHRTLPDKVRRRVLEYAARQGYA
CCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PEAGIDHPVAEGFELRGYSHFTKTAAGEPIWLKTRAAERAYWQGIQGAIDGVQPVDAAIL
CCCCCCCCHHCCEECCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEE
AIPPEPQSDIIPWLQIGDAHIGMLASEEETGANFDISIAEREICAAAAALIDAAPACERL
EECCCCCCCCCCCEEECCCHHEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHCHHHHHH
VINDLGDGTHYETFKAETEASGHRVDQDTRYWKMVQAYIRITRFIVERALTKARTVDYIA
HHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQGNHSRSNDIWIAALIGALYEATGRVNVLRNESPFIAYRMGRTFVMVHHGDKAKPEACA
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCEEEEEECCCCCCHHHHH
KLMSDDYAVDWGETVFRYIDGGHVHHSQRKELPGCLFESWNNLAPRDKYAHDGGWRSKQC
HHHCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHH
MTLVLRSRNYGETARIVMPIERVRDLIRAKQPDHYVPPAMRAFAA
HHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA