| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200998
Identifier: 87200998
GI number: 87200998
Start: 3202079
End: 3202432
Strand: Direct
Name: 87200998
Synonym: Saro_2986
Alternate gene names: NA
Gene position: 3202079-3202432 (Clockwise)
Preceding gene: 87200995
Following gene: 87201018
Centisome position: 89.91
GC content: 57.06
Gene sequence:
>354_bases ATGAAAATCGTGGTCACAGGCGGTCGTGATTTCGGGGATTTTGCCCTTGTAACTCGGGCACTTTCCGCCGTTCACCGCAA GCACGGCATCACTGCACTGATACAAGGTGGTGCCGATGGAGCTGACCGACTGTGTGCGGAATGGGGATGGGATAACGGCA TCCCGGTCGCCACTTTCAATGCAGACTGGAAGACGCACGGAAAGCGAGCAGGTCCATTGCGTAACCAGCGTATGATCGAT GAAGGCACCCCCGACGCGGCAATTGCTTTTCCCGGAGGAAGGGGAACTGCCGATATGCTGGGGAGATTGCAGGCCGCTGG CATTCCGACTTGGGATTTGCGCAATCACCGCTAA
Upstream 100 bases:
>100_bases ATTTACCCAACCGCCCTCGTGCTTGAGGATGACCTTCAACGCAGCGTCAAACGCGGTCATGGGGATTCCCCTTCATGCAG GCTTGTGGTATGGAAAAGCC
Downstream 100 bases:
>100_bases ATCCTCCCGCTAAGGGCCGTCACAATGTCGATAAGCGGCAGGCACACGTCCCGGACGTTCTCGCCCTCACGGATGCGCTT TGCTGCCTGTGTCAGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKIVVTGGRDFGDFALVTRALSAVHRKHGITALIQGGADGADRLCAEWGWDNGIPVATFNADWKTHGKRAGPLRNQRMID EGTPDAAIAFPGGRGTADMLGRLQAAGIPTWDLRNHR
Sequences:
>Translated_117_residues MKIVVTGGRDFGDFALVTRALSAVHRKHGITALIQGGADGADRLCAEWGWDNGIPVATFNADWKTHGKRAGPLRNQRMID EGTPDAAIAFPGGRGTADMLGRLQAAGIPTWDLRNHR >Mature_117_residues MKIVVTGGRDFGDFALVTRALSAVHRKHGITALIQGGADGADRLCAEWGWDNGIPVATFNADWKTHGKRAGPLRNQRMID EGTPDAAIAFPGGRGTADMLGRLQAAGIPTWDLRNHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12559; Mature: 12559
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVVTGGRDFGDFALVTRALSAVHRKHGITALIQGGADGADRLCAEWGWDNGIPVATFN CEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEC ADWKTHGKRAGPLRNQRMIDEGTPDAAIAFPGGRGTADMLGRLQAAGIPTWDLRNHR CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKIVVTGGRDFGDFALVTRALSAVHRKHGITALIQGGADGADRLCAEWGWDNGIPVATFN CEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEC ADWKTHGKRAGPLRNQRMIDEGTPDAAIAFPGGRGTADMLGRLQAAGIPTWDLRNHR CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA