| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200995
Identifier: 87200995
GI number: 87200995
Start: 3199831
End: 3200304
Strand: Direct
Name: 87200995
Synonym: Saro_2983
Alternate gene names: NA
Gene position: 3199831-3200304 (Clockwise)
Preceding gene: 87200994
Following gene: 87200998
Centisome position: 89.84
GC content: 60.34
Gene sequence:
>474_bases ATGCCGCGCGGTCTCAATTCTCCGCTGATCTTTCCAGGCTGTCTGAATGTGATGCGGGCCAAGAAGATTGGGCGCATGGT AGAGGGATGCACCCCGCCCTTGCACTGGCCGAAGCAGCCCTTCGCGCAAAGGAGGCCGGAAATGGCTGATGATCTGGTGG GCGGAATCGTCTGCAACGGCTGCTGGGAGACCTGCGCTCATGCGCCGGGGATCGGATATTACTGTCGAAATGAAGGCTGC ACGTATGAGTATAATAGGGCGAAGGCCATGCTTTGGCACATGCGGCCTGTTGAACCACGAGACGCCCGCATCGAAGCGCT CGAAGCCGCGCTGGCAGAGGCAAGGCGTACAGCCCTGACCGAATGCCTCCGCATCGCCAAGGCGGCGCAATACAGCAAGG CACCAGCCACTGACACCATGCGCGGCATTCAGAAGCTGATAGAGGATTCCCCTACGCCCCCGCCTGTGGTATAG
Upstream 100 bases:
>100_bases AAGTGTGACCGCTTCCGCCGCTTCCTCGACGCCGAAGCATGGACCGACGCTGCGTTGATGCTCATTCCTGACAACTGGAC AGCTTGGGAAATGCGCAGTC
Downstream 100 bases:
>100_bases GGGACGCATAGAACCCGGCCTGCCTCTCGATGCGAAAGGCTTGATCGACCGAGTAGTGAAGCACACTGTGCCGGGTCACT AATTTGAGGTTCCCGCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPRGLNSPLIFPGCLNVMRAKKIGRMVEGCTPPLHWPKQPFAQRRPEMADDLVGGIVCNGCWETCAHAPGIGYYCRNEGC TYEYNRAKAMLWHMRPVEPRDARIEALEAALAEARRTALTECLRIAKAAQYSKAPATDTMRGIQKLIEDSPTPPPVV
Sequences:
>Translated_157_residues MPRGLNSPLIFPGCLNVMRAKKIGRMVEGCTPPLHWPKQPFAQRRPEMADDLVGGIVCNGCWETCAHAPGIGYYCRNEGC TYEYNRAKAMLWHMRPVEPRDARIEALEAALAEARRTALTECLRIAKAAQYSKAPATDTMRGIQKLIEDSPTPPPVV >Mature_156_residues PRGLNSPLIFPGCLNVMRAKKIGRMVEGCTPPLHWPKQPFAQRRPEMADDLVGGIVCNGCWETCAHAPGIGYYCRNEGCT YEYNRAKAMLWHMRPVEPRDARIEALEAALAEARRTALTECLRIAKAAQYSKAPATDTMRGIQKLIEDSPTPPPVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17451; Mature: 17319
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGLNSPLIFPGCLNVMRAKKIGRMVEGCTPPLHWPKQPFAQRRPEMADDLVGGIVCNG CCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH CWETCAHAPGIGYYCRNEGCTYEYNRAKAMLWHMRPVEPRDARIEALEAALAEARRTALT HHHHHHCCCCCCEEECCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ECLRIAKAAQYSKAPATDTMRGIQKLIEDSPTPPPVV HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PRGLNSPLIFPGCLNVMRAKKIGRMVEGCTPPLHWPKQPFAQRRPEMADDLVGGIVCNG CCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH CWETCAHAPGIGYYCRNEGCTYEYNRAKAMLWHMRPVEPRDARIEALEAALAEARRTALT HHHHHHCCCCCCEEECCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ECLRIAKAAQYSKAPATDTMRGIQKLIEDSPTPPPVV HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA