| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200994
Identifier: 87200994
GI number: 87200994
Start: 3199201
End: 3199644
Strand: Direct
Name: 87200994
Synonym: Saro_2982
Alternate gene names: NA
Gene position: 3199201-3199644 (Clockwise)
Preceding gene: 87200993
Following gene: 87200995
Centisome position: 89.83
GC content: 59.91
Gene sequence:
>444_bases ATGATTGACCCGAACGAACTGGAGCGGTTGAGCAAGGCGGCCGAGAAGACCGAAGACGATATCCGCTATTACTCGGGCGG ATCGAAATACAACGAACCGCTTGAGCAGCTTAAAGATCGGCTCGTACACCTCTACCGCACCAGCCAGCTTGTCCCCGTCC AGCAGCCGAGCGAGCCCTACGCCCCCGCACAGAACTGTTTGGAAGTCCCACCAAATATCCTAAAATCGGGAAAGATGCTG GCCGCGATGCGTAAATCTGCGCAGCCGAGCGGGGATGTGGTGGAAGCTGTGGCACGGGCGATCCGACGCGCCGAGATTGG AGGCTTCTCGGATGAAGAAGTTGCGCAGGCTGTCGTGGATGGATCGTGGGAGCACAAGCAGCCTGCCGCCACCGCCGCCA TCACCGCTTACGAAGCCCTTCGCGCAAAGGACACCCGCCCATGA
Upstream 100 bases:
>100_bases ACGGCACAGAGATAACCCGCCAAGCCAAATGCGAAGAATGGCCTTGGGAGGAGAATGACCCCCTCCTCGACATCATCGCC TACAAGCCCGAAGGAACCCC
Downstream 100 bases:
>100_bases CCAATCCGAGAGAGGCGCTGGAAGAGGCGTGGCTGTCCATCCATCACGGGGGCTACCCACCGGAACGCGAGGACGACACA TGCCGGAAGTGTGACCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPYAPAQNCLEVPPNILKSGKML AAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVDGSWEHKQPAATAAITAYEALRAKDTRP
Sequences:
>Translated_147_residues MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPYAPAQNCLEVPPNILKSGKML AAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVDGSWEHKQPAATAAITAYEALRAKDTRP >Mature_147_residues MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPYAPAQNCLEVPPNILKSGKML AAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVDGSWEHKQPAATAAITAYEALRAKDTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16207; Mature: 16207
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC APAQNCLEVPPNILKSGKMLAAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVD CCHHHHHHCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHC GSWEHKQPAATAAITAYEALRAKDTRP CCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC APAQNCLEVPPNILKSGKMLAAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVD CCHHHHHHCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHC GSWEHKQPAATAAITAYEALRAKDTRP CCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA