| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is nasA [H]
Identifier: 87200982
GI number: 87200982
Start: 3189683
End: 3190936
Strand: Reverse
Name: nasA [H]
Synonym: Saro_2970
Alternate gene names: 87200982
Gene position: 3190936-3189683 (Counterclockwise)
Preceding gene: 87200984
Following gene: 87200981
Centisome position: 89.59
GC content: 66.91
Gene sequence:
>1254_bases ATGGCATCGTCCGCAATGACACTGAACACACCCAGAATTCCGGTCGGAAAGTCGTTCTGGCAATCCGGCCACCGCCCGAC GCTGTTCGCGGCGTTCCTCTATTTCGACATCGCCTTCATGGTCTGGGTGATCCTCGGCCCGCTGGCGCCGATCATCTCGA AGGAGCTGGGGCTGGACCCCGCACAGAAGGGGATGATGGTGGCGGTGCCAACGCTGGCGGGCGCGGTCATCCGCCTCGTC AACGGGCTGCTGGTCGACCGCATCGGCCCCAAGCGCACGGGCATCATCAGCCAGGTGGTGGTCATCGCGGGCATGTTCGC CGCGTGGTGGTTCGGGATTTCGTCCTACGAGGGGACGCTGGCGCTTGGCGTGATCCTCGGCTTTGCCGGGGCGAGCTTCG CGGTCTCGCTGCCGCTGGCGAGCCGGTGGTATCCGCCCGAGCACCAGGGCAAGGCCATGGGCATTGCCGGCATGGGCAAT TCGGGCACGGTCTTCGCCTCGCTCTTCGCGGCCTTGCTGGCCAAGTCGTTCGGCTGGACCAATGTCTTCGGCCTGGCGCT GATCCCGCTGGTCGCGGTCTTCGCGTTCTATCTCGTCGCGGCCAAGGACAGCCCCGAACAACCGGAGCCCAAGCCGCTTT CGGCCTATGCCTCGGTGCTGAAGGAGCAGGACGCATGGTGGTTCATGCTGTTCTACTTCGTGACCTTTGGCGGCTTCGTC GGCCTGTCCAGTTCGCTGCCGACGTTCTTTGCCGACAGCTTTGGCGTGACGCCGGTGATCGCCGGGTATTGCACGGCGGC GGCGGTGTTCATGGGCTCGATGCTGCGGCCGCTGGGTGGCGCGCTTGCCGACCGCTTCGGCGGCATCCGCACCCTTTCGG TCGTCTACGTGGTGGCCGGTGCCCTGCTGGCGGTTATCGCCGCTGTTTCCACCCAGGGACTGGCGCTGGCCATTGCGCTG TTCGTGGCGGTGATGGGGACGCTGGGCGTGGGCAACGGTGCGGTTTTCCAGCTCGTGCCGCAACGGTTCCGCAAGGAGAT CGGTGTGATGACCGGGCTCGTAGGCTTCGGGGGCGGCGTTGGCGGTTTCTACCTCGCATCGTCGCTGGGCGCGATCAAGA AGGCCACCGGCAGCGCCTCGCTCGGCTTCCTGATCTTCGCTGCCCTCGCGGTGGTCGCGCTGGTCGGCCTGACGGCAGTC AAGCGCCGCTGGCGGACGACCTGGGGCGCAGCGCTGGGCGGCGCGCGCATCTGA
Upstream 100 bases:
>100_bases CGCATCGCCCGATCCCGCTCCTCGCATGTACGGGCGCAACGCCCGCCCGCGTGAGGATCGGTTCGGAGAGCTTCCAGTCA AGTCCAGGGAGGACAAGGCA
Downstream 100 bases:
>100_bases CCGCTGACGTACCGGCGACCGGGGGGCGACACAGCCGCCCGGCGCCACCATGAGGGAATTCGATCGATGAAGACCAGGAT CCTCGGCGCCGCCGCGATGG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MASSAMTLNTPRIPVGKSFWQSGHRPTLFAAFLYFDIAFMVWVILGPLAPIISKELGLDPAQKGMMVAVPTLAGAVIRLV NGLLVDRIGPKRTGIISQVVVIAGMFAAWWFGISSYEGTLALGVILGFAGASFAVSLPLASRWYPPEHQGKAMGIAGMGN SGTVFASLFAALLAKSFGWTNVFGLALIPLVAVFAFYLVAAKDSPEQPEPKPLSAYASVLKEQDAWWFMLFYFVTFGGFV GLSSSLPTFFADSFGVTPVIAGYCTAAAVFMGSMLRPLGGALADRFGGIRTLSVVYVVAGALLAVIAAVSTQGLALAIAL FVAVMGTLGVGNGAVFQLVPQRFRKEIGVMTGLVGFGGGVGGFYLASSLGAIKKATGSASLGFLIFAALAVVALVGLTAV KRRWRTTWGAALGGARI
Sequences:
>Translated_417_residues MASSAMTLNTPRIPVGKSFWQSGHRPTLFAAFLYFDIAFMVWVILGPLAPIISKELGLDPAQKGMMVAVPTLAGAVIRLV NGLLVDRIGPKRTGIISQVVVIAGMFAAWWFGISSYEGTLALGVILGFAGASFAVSLPLASRWYPPEHQGKAMGIAGMGN SGTVFASLFAALLAKSFGWTNVFGLALIPLVAVFAFYLVAAKDSPEQPEPKPLSAYASVLKEQDAWWFMLFYFVTFGGFV GLSSSLPTFFADSFGVTPVIAGYCTAAAVFMGSMLRPLGGALADRFGGIRTLSVVYVVAGALLAVIAAVSTQGLALAIAL FVAVMGTLGVGNGAVFQLVPQRFRKEIGVMTGLVGFGGGVGGFYLASSLGAIKKATGSASLGFLIFAALAVVALVGLTAV KRRWRTTWGAALGGARI >Mature_416_residues ASSAMTLNTPRIPVGKSFWQSGHRPTLFAAFLYFDIAFMVWVILGPLAPIISKELGLDPAQKGMMVAVPTLAGAVIRLVN GLLVDRIGPKRTGIISQVVVIAGMFAAWWFGISSYEGTLALGVILGFAGASFAVSLPLASRWYPPEHQGKAMGIAGMGNS GTVFASLFAALLAKSFGWTNVFGLALIPLVAVFAFYLVAAKDSPEQPEPKPLSAYASVLKEQDAWWFMLFYFVTFGGFVG LSSSLPTFFADSFGVTPVIAGYCTAAAVFMGSMLRPLGGALADRFGGIRTLSVVYVVAGALLAVIAAVSTQGLALAIALF VAVMGTLGVGNGAVFQLVPQRFRKEIGVMTGLVGFGGGVGGFYLASSLGAIKKATGSASLGFLIFAALAVVALVGLTAVK RRWRTTWGAALGGARI
Specific function: May function as a nitrate transporter [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=446, Percent_Identity=26.457399103139, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1787743, Length=437, Percent_Identity=23.7986270022883, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43431; Mature: 43300
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSAMTLNTPRIPVGKSFWQSGHRPTLFAAFLYFDIAFMVWVILGPLAPIISKELGLDP CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AQKGMMVAVPTLAGAVIRLVNGLLVDRIGPKRTGIISQVVVIAGMFAAWWFGISSYEGTL HHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ALGVILGFAGASFAVSLPLASRWYPPEHQGKAMGIAGMGNSGTVFASLFAALLAKSFGWT HHHHHHHHCCCHHEEECCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCH NVFGLALIPLVAVFAFYLVAAKDSPEQPEPKPLSAYASVLKEQDAWWFMLFYFVTFGGFV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH GLSSSLPTFFADSFGVTPVIAGYCTAAAVFMGSMLRPLGGALADRFGGIRTLSVVYVVAG CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALLAVIAAVSTQGLALAIALFVAVMGTLGVGNGAVFQLVPQRFRKEIGVMTGLVGFGGGV HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH GGFYLASSLGAIKKATGSASLGFLIFAALAVVALVGLTAVKRRWRTTWGAALGGARI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ASSAMTLNTPRIPVGKSFWQSGHRPTLFAAFLYFDIAFMVWVILGPLAPIISKELGLDP CCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AQKGMMVAVPTLAGAVIRLVNGLLVDRIGPKRTGIISQVVVIAGMFAAWWFGISSYEGTL HHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ALGVILGFAGASFAVSLPLASRWYPPEHQGKAMGIAGMGNSGTVFASLFAALLAKSFGWT HHHHHHHHCCCHHEEECCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCH NVFGLALIPLVAVFAFYLVAAKDSPEQPEPKPLSAYASVLKEQDAWWFMLFYFVTFGGFV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH GLSSSLPTFFADSFGVTPVIAGYCTAAAVFMGSMLRPLGGALADRFGGIRTLSVVYVVAG CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALLAVIAAVSTQGLALAIALFVAVMGTLGVGNGAVFQLVPQRFRKEIGVMTGLVGFGGGV HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH GGFYLASSLGAIKKATGSASLGFLIFAALAVVALVGLTAVKRRWRTTWGAALGGARI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]