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The map label for this gene is nrtC [H]

Identifier: 87200984

GI number: 87200984

Start: 3192952

End: 3194160

Strand: Reverse

Name: nrtC [H]

Synonym: Saro_2972

Alternate gene names: 87200984

Gene position: 3194160-3192952 (Counterclockwise)

Preceding gene: 87200985

Following gene: 87200982

Centisome position: 89.68

GC content: 65.59

Gene sequence:

>1209_bases
ATGGGCGCGGAACTCGCGATAGGCTTTCTGCCGCTGGTCGATGCGTGCCTGCCGATCCTGGCGCGCGAACATGGCTTTGC
CGAGGCGGAAGGAATCTCGCTGAAGCTCGTTCGCGACATGAGCTGGGCGACGGTGCTGGACCGCCTGCTCTATGGCCACA
GCGATGCCGCGCACCTCGTCGCGCCGCTTGCGATTGCGACGACGCTGGGGCGGGGACGTCCCGCGGTGCCGCTTTCGGTG
CCATTCGTGCTCGGGCTGAACGGCAATGCGATCACCATGCGCACCGCACTGGCCGAGAGGGTTTGCCCGGCGGGAAGGCT
GGGCGATCCGCGTGCCGTGGGCGCGGCCTTGAAGGACGTGGCCGCCGAGCGCAAGGCGGCGGGCAATCCGCTGCGCTTCG
GCGTGGTGCATCGCTATTCCAGCCACAACTACATGCTGCGCTACTGGCTTGCCGCATGCGGCATCCGACCGGACAAGGAC
GTGGAGATCGCGACGGTGGCGCCGCCGTTCTGTTCCGACGCGCTGGAAGCCGGCGAGGTGGACGTCATTTGCGTCGGGGA
GCCGTGGAACTCGGTGGCGGTAGAGCGGGGCGCGGGCCGGATCGTGCTCGTGACGGCGCAGATCTGGCGACGCGGCGTGG
AGAAGGTGCTGGCTTTGCGCGAGCCCGTCCTCAAGGAGCGGCGCGGCGAGGTCGAAGCCTTGCTGCGGGCGCTGGTGGCA
GCGGCGCGGCACTTCGTTTCCCCTGAAAACTGGGATTCGAACGCAGCGATTCTGGCGCGACCTGAGTACCTTGATGGTTC
GCCAAGCCTGATAAGGCGTGCCATTTCGGATCGAATCCTGCTGGCGCGCGGGGGGGAGCCGGTCCATTATCCGGACTTCA
TGTTCCAGCATCGCGAGGCGGCCAATTTCCCGTGGGTGAGCCAGGCCGAGTGGCTCTATACCCAGATGGTGCGTTGGGAA
GGCATGGAATTCGATCCGGAAATGGCGCGCAAGGCGGCGCGCGTGTTCCGGCCCGATGTCTACCGCAGTGCACTACTGGG
GTCGGGAGAGCCTTTGCCCGGGGCAAGTTCGAAGGTCGAGGGCAGCCTTGGAGGGCTGACTTCGGTGGGGACGCAGCAAG
GGGTCATGACGTTGGAAAACAATCAGTTTTTCGATGGTCGGGCGTTTGATCCCCATGATCTTCAGGGCTATCTCGCAAGT
CAGGCGTGA

Upstream 100 bases:

>100_bases
CCTATGCCGAACTGCGCAAGGCGGCGATGAACCAGAGCAAGCGGATCGCCGATATCGCCGAAGCCGTTGTCACGGCGCAC
AAGCTCATGGGAGGCGAATG

Downstream 100 bases:

>100_bases
ACGCCTGATTCTGTTGCACTGCAAAAAGAACTTTACGTGGCGAATGCGAATCGCTTAGGTTCCCGGTTGTCGCGACCATG
CGTTCCAAGGACGGAGCGCA

Product: nitrate transporter component, nrtA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MGAELAIGFLPLVDACLPILAREHGFAEAEGISLKLVRDMSWATVLDRLLYGHSDAAHLVAPLAIATTLGRGRPAVPLSV
PFVLGLNGNAITMRTALAERVCPAGRLGDPRAVGAALKDVAAERKAAGNPLRFGVVHRYSSHNYMLRYWLAACGIRPDKD
VEIATVAPPFCSDALEAGEVDVICVGEPWNSVAVERGAGRIVLVTAQIWRRGVEKVLALREPVLKERRGEVEALLRALVA
AARHFVSPENWDSNAAILARPEYLDGSPSLIRRAISDRILLARGGEPVHYPDFMFQHREAANFPWVSQAEWLYTQMVRWE
GMEFDPEMARKAARVFRPDVYRSALLGSGEPLPGASSKVEGSLGGLTSVGTQQGVMTLENNQFFDGRAFDPHDLQGYLAS
QA

Sequences:

>Translated_402_residues
MGAELAIGFLPLVDACLPILAREHGFAEAEGISLKLVRDMSWATVLDRLLYGHSDAAHLVAPLAIATTLGRGRPAVPLSV
PFVLGLNGNAITMRTALAERVCPAGRLGDPRAVGAALKDVAAERKAAGNPLRFGVVHRYSSHNYMLRYWLAACGIRPDKD
VEIATVAPPFCSDALEAGEVDVICVGEPWNSVAVERGAGRIVLVTAQIWRRGVEKVLALREPVLKERRGEVEALLRALVA
AARHFVSPENWDSNAAILARPEYLDGSPSLIRRAISDRILLARGGEPVHYPDFMFQHREAANFPWVSQAEWLYTQMVRWE
GMEFDPEMARKAARVFRPDVYRSALLGSGEPLPGASSKVEGSLGGLTSVGTQQGVMTLENNQFFDGRAFDPHDLQGYLAS
QA
>Mature_401_residues
GAELAIGFLPLVDACLPILAREHGFAEAEGISLKLVRDMSWATVLDRLLYGHSDAAHLVAPLAIATTLGRGRPAVPLSVP
FVLGLNGNAITMRTALAERVCPAGRLGDPRAVGAALKDVAAERKAAGNPLRFGVVHRYSSHNYMLRYWLAACGIRPDKDV
EIATVAPPFCSDALEAGEVDVICVGEPWNSVAVERGAGRIVLVTAQIWRRGVEKVLALREPVLKERRGEVEALLRALVAA
ARHFVSPENWDSNAAILARPEYLDGSPSLIRRAISDRILLARGGEPVHYPDFMFQHREAANFPWVSQAEWLYTQMVRWEG
MEFDPEMARKAARVFRPDVYRSALLGSGEPLPGASSKVEGSLGGLTSVGTQQGVMTLENNQFFDGRAFDPHDLQGYLASQ
A

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 43735; Mature: 43603

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAELAIGFLPLVDACLPILAREHGFAEAEGISLKLVRDMSWATVLDRLLYGHSDAAHLV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHH
APLAIATTLGRGRPAVPLSVPFVLGLNGNAITMRTALAERVCPAGRLGDPRAVGAALKDV
HHHHHHHHHCCCCCCCEEECCEEEECCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AAERKAAGNPLRFGVVHRYSSHNYMLRYWLAACGIRPDKDVEIATVAPPFCSDALEAGEV
HHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCCE
DVICVGEPWNSVAVERGAGRIVLVTAQIWRRGVEKVLALREPVLKERRGEVEALLRALVA
EEEEECCCCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AARHFVSPENWDSNAAILARPEYLDGSPSLIRRAISDRILLARGGEPVHYPDFMFQHREA
HHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHC
ANFPWVSQAEWLYTQMVRWEGMEFDPEMARKAARVFRPDVYRSALLGSGEPLPGASSKVE
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
GSLGGLTSVGTQQGVMTLENNQFFDGRAFDPHDLQGYLASQA
CCCCCCHHCCCCCCEEEECCCEECCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
GAELAIGFLPLVDACLPILAREHGFAEAEGISLKLVRDMSWATVLDRLLYGHSDAAHLV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHH
APLAIATTLGRGRPAVPLSVPFVLGLNGNAITMRTALAERVCPAGRLGDPRAVGAALKDV
HHHHHHHHHCCCCCCCEEECCEEEECCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AAERKAAGNPLRFGVVHRYSSHNYMLRYWLAACGIRPDKDVEIATVAPPFCSDALEAGEV
HHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCCE
DVICVGEPWNSVAVERGAGRIVLVTAQIWRRGVEKVLALREPVLKERRGEVEALLRALVA
EEEEECCCCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AARHFVSPENWDSNAAILARPEYLDGSPSLIRRAISDRILLARGGEPVHYPDFMFQHREA
HHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHC
ANFPWVSQAEWLYTQMVRWEGMEFDPEMARKAARVFRPDVYRSALLGSGEPLPGASSKVE
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
GSLGGLTSVGTQQGVMTLENNQFFDGRAFDPHDLQGYLASQA
CCCCCCHHCCCCCCEEEECCCEECCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]