| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200981
Identifier: 87200981
GI number: 87200981
Start: 3188360
End: 3189616
Strand: Reverse
Name: 87200981
Synonym: Saro_2969
Alternate gene names: NA
Gene position: 3189616-3188360 (Counterclockwise)
Preceding gene: 87200982
Following gene: 87200980
Centisome position: 89.56
GC content: 66.19
Gene sequence:
>1257_bases ATGAAGACCAGGATCCTCGGCGCCGCCGCGATGGCAGCGCCGCTCGCTCTCGCCCAACCTGCGGAAGCTGCGCCCGCGTC TTTCGGCGAGGCTGTCGAAGTCGCCGATGGCACCGTGCTGGACCCGATAGTCGAGGCACGCCTGCGCTATGAAGGCGTGG ACCAGCCGACCACCGACGCCGACGCCCTGACCGTGCGGCTGCGCGCGGGGTTCGAGGTGCGTCATGCGCCCTCGCACCTC TCGTTCCTGGCCGAGGCGGAAGGGACGCTCGGCCTGTGGAACGACTACAACGCCTTTCCCTTCGCGCTTGCCGGCAGTAG CCAAAGGCGACCGCAGTTCGCCACGGTTCCCGATGCGGAAAGCATCGATCTCAATCGCTTGCAGGTGCAGTACCGGACGA AGGGCCTCGCGGTCACGGTCGGGCGTCAGCGCATCAATCTCGACGACCAGCGCTTTGTCGGTTCGGTCGGATGGCGGCAG AACGAGCAGACATTCGATGCGGTGCGGGCCGAGGTCGCGGCAGGGCCGGTCACGTTCGATGGCACTTACGCGATCCGGCA GGATTCGATCTTCGGATCGGAGGCCGGGCCGCGCCGCGCGATGGACGGGGACTTCGTGTTCCTCAACGCCGGGGCGAAAA CGGGGGCGGTGACCGCCAAGGGCTTTGCCTATCTCATTGATTATGAAGAGGCCTTTGCCTTCGCCAATTCCTCGCAGACC TATGGCGGGCGGATCGCGGCCGGCTTCCCCCTGTCGGCCAAGGTCAAGCTCAGCCTCGTCGGCAGCTATGCCCGGCAGAT GGACATGGGCCGCAACCCGGTCCGCTACCGCGCCGACTATCTGCTTGGCGAGGCGGGGCTTTCGTCGCGCGGGTTCACCC TGACGGGCGGCTACGAACGTCTCGGGGCAGACGGGACGGCGGGCAAGGCCTTCCAGACGCCGCTGGCGACGCTGCACAAG TTCAACGGTTGGGCCGACCTGTTCCTGACGACGCCCGCCGCCGGGCTCGAAGACCGCTATGTCACGCTGGCGAAGGTCTT CCCGAAAGTGAAGGCGCTGCCGGGGCTCAATGCCATGGTGACCTGGCACGACCTGCGCAGTGATATCGGAAACGCCCGCT ATGGCACCGAATGGGACGCCAGTGTCGGGTTCAGGTCCGGCAAGGTCGCATGGCTGGCCAAATATGCCGACTACGACGCG AAGAGCTTCGGTACGGACCGCCGTATCGTGTGGCTCCAGGCTGAAGTCGCATTCTGA
Upstream 100 bases:
>100_bases CTGGGGCGCAGCGCTGGGCGGCGCGCGCATCTGACCGCTGACGTACCGGCGACCGGGGGGCGACACAGCCGCCCGGCGCC ACCATGAGGGAATTCGATCG
Downstream 100 bases:
>100_bases CCGGGCGTGCTGCACTGCAAAATAAGACTTGCGGTGCAGCCGCCGAATCGGTTAGCAAAGTGATCGAAGGCCGATGCGCC GCCCAATGACGGGCGGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKTRILGAAAMAAPLALAQPAEAAPASFGEAVEVADGTVLDPIVEARLRYEGVDQPTTDADALTVRLRAGFEVRHAPSHL SFLAEAEGTLGLWNDYNAFPFALAGSSQRRPQFATVPDAESIDLNRLQVQYRTKGLAVTVGRQRINLDDQRFVGSVGWRQ NEQTFDAVRAEVAAGPVTFDGTYAIRQDSIFGSEAGPRRAMDGDFVFLNAGAKTGAVTAKGFAYLIDYEEAFAFANSSQT YGGRIAAGFPLSAKVKLSLVGSYARQMDMGRNPVRYRADYLLGEAGLSSRGFTLTGGYERLGADGTAGKAFQTPLATLHK FNGWADLFLTTPAAGLEDRYVTLAKVFPKVKALPGLNAMVTWHDLRSDIGNARYGTEWDASVGFRSGKVAWLAKYADYDA KSFGTDRRIVWLQAEVAF
Sequences:
>Translated_418_residues MKTRILGAAAMAAPLALAQPAEAAPASFGEAVEVADGTVLDPIVEARLRYEGVDQPTTDADALTVRLRAGFEVRHAPSHL SFLAEAEGTLGLWNDYNAFPFALAGSSQRRPQFATVPDAESIDLNRLQVQYRTKGLAVTVGRQRINLDDQRFVGSVGWRQ NEQTFDAVRAEVAAGPVTFDGTYAIRQDSIFGSEAGPRRAMDGDFVFLNAGAKTGAVTAKGFAYLIDYEEAFAFANSSQT YGGRIAAGFPLSAKVKLSLVGSYARQMDMGRNPVRYRADYLLGEAGLSSRGFTLTGGYERLGADGTAGKAFQTPLATLHK FNGWADLFLTTPAAGLEDRYVTLAKVFPKVKALPGLNAMVTWHDLRSDIGNARYGTEWDASVGFRSGKVAWLAKYADYDA KSFGTDRRIVWLQAEVAF >Mature_418_residues MKTRILGAAAMAAPLALAQPAEAAPASFGEAVEVADGTVLDPIVEARLRYEGVDQPTTDADALTVRLRAGFEVRHAPSHL SFLAEAEGTLGLWNDYNAFPFALAGSSQRRPQFATVPDAESIDLNRLQVQYRTKGLAVTVGRQRINLDDQRFVGSVGWRQ NEQTFDAVRAEVAAGPVTFDGTYAIRQDSIFGSEAGPRRAMDGDFVFLNAGAKTGAVTAKGFAYLIDYEEAFAFANSSQT YGGRIAAGFPLSAKVKLSLVGSYARQMDMGRNPVRYRADYLLGEAGLSSRGFTLTGGYERLGADGTAGKAFQTPLATLHK FNGWADLFLTTPAAGLEDRYVTLAKVFPKVKALPGLNAMVTWHDLRSDIGNARYGTEWDASVGFRSGKVAWLAKYADYDA KSFGTDRRIVWLQAEVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45185; Mature: 45185
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRILGAAAMAAPLALAQPAEAAPASFGEAVEVADGTVLDPIVEARLRYEGVDQPTTDA CCCEEEEHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCC DALTVRLRAGFEVRHAPSHLSFLAEAEGTLGLWNDYNAFPFALAGSSQRRPQFATVPDAE CEEEEEEECCEEEEECCHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCC SIDLNRLQVQYRTKGLAVTVGRQRINLDDQRFVGSVGWRQNEQTFDAVRAEVAAGPVTFD CCCCEEEEEEEECCCEEEEECCEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEC GTYAIRQDSIFGSEAGPRRAMDGDFVFLNAGAKTGAVTAKGFAYLIDYEEAFAFANSSQT CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCEEEEEEHHHHHHCCCCCCC YGGRIAAGFPLSAKVKLSLVGSYARQMDMGRNPVRYRADYLLGEAGLSSRGFTLTGGYER CCCEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHEEHHEEEECCCCCCCCEEEECCHHH LGADGTAGKAFQTPLATLHKFNGWADLFLTTPAAGLEDRYVTLAKVFPKVKALPGLNAMV HCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCEEE TWHDLRSDIGNARYGTEWDASVGFRSGKVAWLAKYADYDAKSFGTDRRIVWLQAEVAF EHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCEEEEEEEEECC >Mature Secondary Structure MKTRILGAAAMAAPLALAQPAEAAPASFGEAVEVADGTVLDPIVEARLRYEGVDQPTTDA CCCEEEEHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCC DALTVRLRAGFEVRHAPSHLSFLAEAEGTLGLWNDYNAFPFALAGSSQRRPQFATVPDAE CEEEEEEECCEEEEECCHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCC SIDLNRLQVQYRTKGLAVTVGRQRINLDDQRFVGSVGWRQNEQTFDAVRAEVAAGPVTFD CCCCEEEEEEEECCCEEEEECCEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEC GTYAIRQDSIFGSEAGPRRAMDGDFVFLNAGAKTGAVTAKGFAYLIDYEEAFAFANSSQT CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCEEEEEEHHHHHHCCCCCCC YGGRIAAGFPLSAKVKLSLVGSYARQMDMGRNPVRYRADYLLGEAGLSSRGFTLTGGYER CCCEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHEEHHEEEECCCCCCCCEEEECCHHH LGADGTAGKAFQTPLATLHKFNGWADLFLTTPAAGLEDRYVTLAKVFPKVKALPGLNAMV HCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCEEE TWHDLRSDIGNARYGTEWDASVGFRSGKVAWLAKYADYDAKSFGTDRRIVWLQAEVAF EHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA