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The map label for this gene is pcoD [H]

Identifier: 87200936

GI number: 87200936

Start: 3141239

End: 3142093

Strand: Reverse

Name: pcoD [H]

Synonym: Saro_2924

Alternate gene names: 87200936

Gene position: 3142093-3141239 (Counterclockwise)

Preceding gene: 87200937

Following gene: 87200935

Centisome position: 88.22

GC content: 70.06

Gene sequence:

>855_bases
GTGGAAACGCCCGGCCTGATCCTGTCGCGGGGCATCGCGTACCTGGCGCTGCTGCTGGTCGCGGGCCTGCCGATCCTTGC
GCTGAGCAACGGCCTGCCGGGGGAACTGTCCTCCCGGCAGCGCCGCGCGCTTGCATTGCTCGCGCTGGTTGCGGCGGGCG
CCTCGATCTGGTGGGCGCTCGAAAGCGTGGCCGCCATGGCGGGCATGACGCTGGCGACGCTGGATCAGGAAACCTTTACC
GTCGTCCTTGCCGCAACCCCGCTGGGGGCGGTCATGGAATGGCGGCTTACCGCGCTTTTCGCGGTGCTTCTGGCGATGGT
CGTGCCGCTGCGTGCGCTGCGCGTGCCGGTGGCGACACTGGCGGGCGGCGTGGCGCTGGGCTCGATGGCCTGGACCGGTC
ATGCGGGCGCAAGCGAAGTGCCGCTGCACCGCTGGGCCGATGTCGTCCACCTGGTTGCCGCCGCGACGTGGATCGGCGCT
CTCGCGGCGTTCGTGACGCGCGCCTTCACCCGCGAGACGCGGGCGCAGGTCGAGGCGCTGGCGAAGTTTGCGCGCACCGG
TACTGCCATTGTCGCGCTGCTGCTTCTTACCGGCATGGTCAACACCCTGGCCATCGCGGGCTGGCCGGTCCCGCTTTCCA
GCCGCTGGACCATGCTGCTTGCCCTCAAGCTTGGGCTGTTCGCGGCGATGCTGGGCCTTGCCGCCTCAAACCGCTGGCGC
ATCGTCCCCGCGCTGGAGCGTGGCGAAGTGGGAGCAGTGGGGCGGCTGCGCCGTTCGATGGTCATGGAATTGGCCGCAGG
CCTCGGCGTTGTCGCTATCGTTTCCCTGCTGGGTGTCCTCGATCCGGCGGCGTGA

Upstream 100 bases:

>100_bases
GGTTCCTATCAGCTCAAGTGGCATGCGGTCGCGGCCGACCAGCACCGCATCCAGGGCCAGTACGCGTTCACCGTCCGCTG
AACCCGGGCGGTAGCGAAGC

Downstream 100 bases:

>100_bases
CAGGAAACGGCAATAAAGATTTCCCGCACGGGCGCTTGACCGGCAACCGCTTTGGCGTAGCTCTCTTTCCCGCTGCAACC
TGACTACGGGAGAGAGCTAA

Product: copper resistance D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
METPGLILSRGIAYLALLLVAGLPILALSNGLPGELSSRQRRALALLALVAAGASIWWALESVAAMAGMTLATLDQETFT
VVLAATPLGAVMEWRLTALFAVLLAMVVPLRALRVPVATLAGGVALGSMAWTGHAGASEVPLHRWADVVHLVAAATWIGA
LAAFVTRAFTRETRAQVEALAKFARTGTAIVALLLLTGMVNTLAIAGWPVPLSSRWTMLLALKLGLFAAMLGLAASNRWR
IVPALERGEVGAVGRLRRSMVMELAAGLGVVAIVSLLGVLDPAA

Sequences:

>Translated_284_residues
METPGLILSRGIAYLALLLVAGLPILALSNGLPGELSSRQRRALALLALVAAGASIWWALESVAAMAGMTLATLDQETFT
VVLAATPLGAVMEWRLTALFAVLLAMVVPLRALRVPVATLAGGVALGSMAWTGHAGASEVPLHRWADVVHLVAAATWIGA
LAAFVTRAFTRETRAQVEALAKFARTGTAIVALLLLTGMVNTLAIAGWPVPLSSRWTMLLALKLGLFAAMLGLAASNRWR
IVPALERGEVGAVGRLRRSMVMELAAGLGVVAIVSLLGVLDPAA
>Mature_284_residues
METPGLILSRGIAYLALLLVAGLPILALSNGLPGELSSRQRRALALLALVAAGASIWWALESVAAMAGMTLATLDQETFT
VVLAATPLGAVMEWRLTALFAVLLAMVVPLRALRVPVATLAGGVALGSMAWTGHAGASEVPLHRWADVVHLVAAATWIGA
LAAFVTRAFTRETRAQVEALAKFARTGTAIVALLLLTGMVNTLAIAGWPVPLSSRWTMLLALKLGLFAAMLGLAASNRWR
IVPALERGEVGAVGRLRRSMVMELAAGLGVVAIVSLLGVLDPAA

Specific function: Required for the copper-inducible expression of copper resistance [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopD family [H]

Homologues:

Organism=Escherichia coli, GI1788145, Length=287, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008457 [H]

Pfam domain/function: PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 29516; Mature: 29516

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPGLILSRGIAYLALLLVAGLPILALSNGLPGELSSRQRRALALLALVAAGASIWWAL
CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ESVAAMAGMTLATLDQETFTVVLAATPLGAVMEWRLTALFAVLLAMVVPLRALRVPVATL
HHHHHHHCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGVALGSMAWTGHAGASEVPLHRWADVVHLVAAATWIGALAAFVTRAFTRETRAQVEAL
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKFARTGTAIVALLLLTGMVNTLAIAGWPVPLSSRWTMLLALKLGLFAAMLGLAASNRWR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
IVPALERGEVGAVGRLRRSMVMELAAGLGVVAIVSLLGVLDPAA
EEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METPGLILSRGIAYLALLLVAGLPILALSNGLPGELSSRQRRALALLALVAAGASIWWAL
CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ESVAAMAGMTLATLDQETFTVVLAATPLGAVMEWRLTALFAVLLAMVVPLRALRVPVATL
HHHHHHHCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGVALGSMAWTGHAGASEVPLHRWADVVHLVAAATWIGALAAFVTRAFTRETRAQVEAL
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKFARTGTAIVALLLLTGMVNTLAIAGWPVPLSSRWTMLLALKLGLFAAMLGLAASNRWR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
IVPALERGEVGAVGRLRRSMVMELAAGLGVVAIVSLLGVLDPAA
EEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8594334 [H]