Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200935

Identifier: 87200935

GI number: 87200935

Start: 3140768

End: 3141139

Strand: Reverse

Name: 87200935

Synonym: Saro_2923

Alternate gene names: NA

Gene position: 3141139-3140768 (Counterclockwise)

Preceding gene: 87200936

Following gene: 87200934

Centisome position: 88.19

GC content: 67.2

Gene sequence:

>372_bases
ATGTTCAGCCACGTGATGGTCGGCGCCGATGACATCGACGCCGCGAAGAAGTTTTACGACGCCACGTTCAAGGCGTTCGG
CGGGCCGGAAGCGATCACCGACCCCAAGGGCCGGCTGATCTACCAGCACAACGGCGGCCTGTTCATCGTGACCAAGCCGA
TCAACGGCGAGCCGGCGAGCGGCGCCAACGGCGGCACCATCGGCTTCCGCATGAGCCCGGAACAGGCCAACGCCTGGCAC
GCGGCCGGTTGCGCCAACGGCGGCACGGCCTGCGAGGACCCGCCGGGACCGCGCGAGGGTTCGCCCTACTATCTCGCCTA
TCTGCGCGATCCTTCCGGCAACAAGCTCTGCGCGCTGGACATCATCGCCTGA

Upstream 100 bases:

>100_bases
ACAGGAAACGGCAATAAAGATTTCCCGCACGGGCGCTTGACCGGCAACCGCTTTGGCGTAGCTCTCTTTCCCGCTGCAAC
CTGACTACGGGAGAGAGCTA

Downstream 100 bases:

>100_bases
TGAGCATCGAGACCGTATCGACAAGCAAGGCGCACGGCGGAACGCTGGGCGTCTACAAGCACGATTCGGCCTCCACGGGG
ACGGGAATGACCTTTTCGGT

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Dioxygenase; Lactoylglutathione Lyase-Like Lyase; Glyoxalase/Dioxygenase; Glyoxalase/Bleomycin Resistance; Glyoxalase-Family Protein; Glyoxalase/Bleomycin Resistance Dioxygenase; Lactoylglutathione Lyase Protein

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPASGANGGTIGFRMSPEQANAWH
AAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALDIIA

Sequences:

>Translated_123_residues
MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPASGANGGTIGFRMSPEQANAWH
AAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALDIIA
>Mature_123_residues
MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPASGANGGTIGFRMSPEQANAWH
AAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALDIIA

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12891; Mature: 12891

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPAS
CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCC
GANGGTIGFRMSPEQANAWHAAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALD
CCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
IIA
EEC
>Mature Secondary Structure
MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPAS
CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCC
GANGGTIGFRMSPEQANAWHAAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALD
CCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
IIA
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA