| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200935
Identifier: 87200935
GI number: 87200935
Start: 3140768
End: 3141139
Strand: Reverse
Name: 87200935
Synonym: Saro_2923
Alternate gene names: NA
Gene position: 3141139-3140768 (Counterclockwise)
Preceding gene: 87200936
Following gene: 87200934
Centisome position: 88.19
GC content: 67.2
Gene sequence:
>372_bases ATGTTCAGCCACGTGATGGTCGGCGCCGATGACATCGACGCCGCGAAGAAGTTTTACGACGCCACGTTCAAGGCGTTCGG CGGGCCGGAAGCGATCACCGACCCCAAGGGCCGGCTGATCTACCAGCACAACGGCGGCCTGTTCATCGTGACCAAGCCGA TCAACGGCGAGCCGGCGAGCGGCGCCAACGGCGGCACCATCGGCTTCCGCATGAGCCCGGAACAGGCCAACGCCTGGCAC GCGGCCGGTTGCGCCAACGGCGGCACGGCCTGCGAGGACCCGCCGGGACCGCGCGAGGGTTCGCCCTACTATCTCGCCTA TCTGCGCGATCCTTCCGGCAACAAGCTCTGCGCGCTGGACATCATCGCCTGA
Upstream 100 bases:
>100_bases ACAGGAAACGGCAATAAAGATTTCCCGCACGGGCGCTTGACCGGCAACCGCTTTGGCGTAGCTCTCTTTCCCGCTGCAAC CTGACTACGGGAGAGAGCTA
Downstream 100 bases:
>100_bases TGAGCATCGAGACCGTATCGACAAGCAAGGCGCACGGCGGAACGCTGGGCGTCTACAAGCACGATTCGGCCTCCACGGGG ACGGGAATGACCTTTTCGGT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Dioxygenase; Lactoylglutathione Lyase-Like Lyase; Glyoxalase/Dioxygenase; Glyoxalase/Bleomycin Resistance; Glyoxalase-Family Protein; Glyoxalase/Bleomycin Resistance Dioxygenase; Lactoylglutathione Lyase Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPASGANGGTIGFRMSPEQANAWH AAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALDIIA
Sequences:
>Translated_123_residues MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPASGANGGTIGFRMSPEQANAWH AAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALDIIA >Mature_123_residues MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPASGANGGTIGFRMSPEQANAWH AAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALDIIA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12891; Mature: 12891
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPAS CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCC GANGGTIGFRMSPEQANAWHAAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALD CCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE IIA EEC >Mature Secondary Structure MFSHVMVGADDIDAAKKFYDATFKAFGGPEAITDPKGRLIYQHNGGLFIVTKPINGEPAS CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCC GANGGTIGFRMSPEQANAWHAAGCANGGTACEDPPGPREGSPYYLAYLRDPSGNKLCALD CCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE IIA EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA