| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fghA [H]
Identifier: 87200934
GI number: 87200934
Start: 3139911
End: 3140768
Strand: Reverse
Name: fghA [H]
Synonym: Saro_2922
Alternate gene names: 87200934
Gene position: 3140768-3139911 (Counterclockwise)
Preceding gene: 87200935
Following gene: 87200930
Centisome position: 88.18
GC content: 67.72
Gene sequence:
>858_bases ATGAGCATCGAGACCGTATCGACAAGCAAGGCGCACGGCGGAACGCTGGGCGTCTACAAGCACGATTCGGCCTCCACGGG GACGGGAATGACCTTTTCGGTCTTCCTGCCCCCACAGGCGGCCGCCGGCGCAAAGCTGCCGGTGCTGGTCTACCTTTCGG GGCTTACCTGCACGCACGCCAACGTCACCGACAAGGGCGAGTACCGCAAGGCTTGCGCGGAGCACGGCCTGGTCTTCGTC GCCCCGGATACGAGCCCGCGCGGCGAGGGCGTGGCTGACGATCCTGACGCGGCCTACGACTTCGGACTGGGCGCGGGGTT CTACGTGAACGCAACGCAGCAGCCGTTCGCGCGGCACTACCGCATGTGGGACTATATCGCCGAGGAACTGCCCGCCCTGC TGGCGGCGAACTTCCCGGTCGACCTTGGCCGCATGGGCATTACCGGGCACTCGATGGGCGGGCACGGCGCGCTGACGCTG GGGCTGACCCATCCCGAGAAGTTCCGTTCGCTTTCGGCCTTCGCGCCGATCGTCGCGCCGGGGCAGGTGCCGTGGGGCCA CAAGGCGCTGGGCGGCTATCTGGGCGACGACCGCGCAGCGTGGCGCAAGCACGACGCGGTGGCGCTGATCGAGGACGGCC GGCGGCCGGGGGGCGACATTCTGGTCGACCAGGGCGATGCGGACGGTTTTCTTGTCGAACAGCTTCGGCCGGAACTGCTC GATGCGGCCTGCAAGGCGGCGGGCGTCGACCTGACGCTGCGGATGCAGCCGGGCTACGACCACAGCTACAACTTCATTTC GACCTTCATGGACGACCATGTGCGCTGGCATGCGGAGCGTTTGAAGGTCCGGCCCTGA
Upstream 100 bases:
>100_bases GCGAGGACCCGCCGGGACCGCGCGAGGGTTCGCCCTACTATCTCGCCTATCTGCGCGATCCTTCCGGCAACAAGCTCTGC GCGCTGGACATCATCGCCTG
Downstream 100 bases:
>100_bases TCCATCCCTTGCCCTCGGGTGGAGTCCTGGGGGCGGGACGAAGCCTTGGCCCGGATCAAGCCCGGGCCGACGAAGGTGCG GGGCGGCAGGGTTTTGGGGT
Product: carboxylesterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSIETVSTSKAHGGTLGVYKHDSASTGTGMTFSVFLPPQAAAGAKLPVLVYLSGLTCTHANVTDKGEYRKACAEHGLVFV APDTSPRGEGVADDPDAAYDFGLGAGFYVNATQQPFARHYRMWDYIAEELPALLAANFPVDLGRMGITGHSMGGHGALTL GLTHPEKFRSLSAFAPIVAPGQVPWGHKALGGYLGDDRAAWRKHDAVALIEDGRRPGGDILVDQGDADGFLVEQLRPELL DAACKAAGVDLTLRMQPGYDHSYNFISTFMDDHVRWHAERLKVRP
Sequences:
>Translated_285_residues MSIETVSTSKAHGGTLGVYKHDSASTGTGMTFSVFLPPQAAAGAKLPVLVYLSGLTCTHANVTDKGEYRKACAEHGLVFV APDTSPRGEGVADDPDAAYDFGLGAGFYVNATQQPFARHYRMWDYIAEELPALLAANFPVDLGRMGITGHSMGGHGALTL GLTHPEKFRSLSAFAPIVAPGQVPWGHKALGGYLGDDRAAWRKHDAVALIEDGRRPGGDILVDQGDADGFLVEQLRPELL DAACKAAGVDLTLRMQPGYDHSYNFISTFMDDHVRWHAERLKVRP >Mature_284_residues SIETVSTSKAHGGTLGVYKHDSASTGTGMTFSVFLPPQAAAGAKLPVLVYLSGLTCTHANVTDKGEYRKACAEHGLVFVA PDTSPRGEGVADDPDAAYDFGLGAGFYVNATQQPFARHYRMWDYIAEELPALLAANFPVDLGRMGITGHSMGGHGALTLG LTHPEKFRSLSAFAPIVAPGQVPWGHKALGGYLGDDRAAWRKHDAVALIEDGRRPGGDILVDQGDADGFLVEQLRPELLD AACKAAGVDLTLRMQPGYDHSYNFISTFMDDHVRWHAERLKVRP
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate (Probable) [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=283, Percent_Identity=50.1766784452297, Blast_Score=296, Evalue=2e-80, Organism=Escherichia coli, GI1786551, Length=282, Percent_Identity=46.8085106382979, Blast_Score=270, Evalue=8e-74, Organism=Escherichia coli, GI1788477, Length=280, Percent_Identity=49.6428571428571, Blast_Score=267, Evalue=6e-73, Organism=Caenorhabditis elegans, GI17510185, Length=284, Percent_Identity=50, Blast_Score=270, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=43.9189189189189, Blast_Score=247, Evalue=2e-66, Organism=Drosophila melanogaster, GI45551932, Length=283, Percent_Identity=46.643109540636, Blast_Score=258, Evalue=3e-69, Organism=Drosophila melanogaster, GI24648347, Length=283, Percent_Identity=46.643109540636, Blast_Score=258, Evalue=4e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 30604; Mature: 30473
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIETVSTSKAHGGTLGVYKHDSASTGTGMTFSVFLPPQAAAGAKLPVLVYLSGLTCTHA CCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCEEECC NVTDKGEYRKACAEHGLVFVAPDTSPRGEGVADDPDAAYDFGLGAGFYVNATQQPFARHY CCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCHHHHHH RMWDYIAEELPALLAANFPVDLGRMGITGHSMGGHGALTLGLTHPEKFRSLSAFAPIVAP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEECC GQVPWGHKALGGYLGDDRAAWRKHDAVALIEDGRRPGGDILVDQGDADGFLVEQLRPELL CCCCCCHHHHCCCCCCCHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHCHHHH DAACKAAGVDLTLRMQPGYDHSYNFISTFMDDHVRWHAERLKVRP HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIETVSTSKAHGGTLGVYKHDSASTGTGMTFSVFLPPQAAAGAKLPVLVYLSGLTCTHA CCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCEEECC NVTDKGEYRKACAEHGLVFVAPDTSPRGEGVADDPDAAYDFGLGAGFYVNATQQPFARHY CCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCHHHHHH RMWDYIAEELPALLAANFPVDLGRMGITGHSMGGHGALTLGLTHPEKFRSLSAFAPIVAP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEECC GQVPWGHKALGGYLGDDRAAWRKHDAVALIEDGRRPGGDILVDQGDADGFLVEQLRPELL CCCCCCHHHHCCCCCCCHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHCHHHH DAACKAAGVDLTLRMQPGYDHSYNFISTFMDDHVRWHAERLKVRP HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892832 [H]