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The map label for this gene is rpsU

Identifier: 87200848

GI number: 87200848

Start: 3062508

End: 3062714

Strand: Reverse

Name: rpsU

Synonym: Saro_2835

Alternate gene names: 87200848

Gene position: 3062714-3062508 (Counterclockwise)

Preceding gene: 87200855

Following gene: 87200847

Centisome position: 85.99

GC content: 60.39

Gene sequence:

>207_bases
ATGCAGATTCTCGTTCGCGATAACAACGTCGACCAGGCTCTTCGTGCTCTCAAGAAGAAGCTGCAGCGTGAAGGCGTGTA
TCGTGAAATGAAGCTGCGTCGTCACTTCGAGAAGCCCTCGGAAAAGCGCGCTCGCGAAAAGGCTGCCGCCGTGCGCCGCG
CCCGCAAGCTCGAGCGCAAGCGCCAGGAGCGTGACGGCGCGAAGTAA

Upstream 100 bases:

>100_bases
GCCGGTCCTGCACGGATTCGGCACGTTTAGTATTTCCAGAATCAGGGTGACTCCCGCGCTTTCTGCGGGCTCTCGCCGAC
AGATTGAGGTGTAGCGGTTT

Downstream 100 bases:

>100_bases
GCCCGGGCGGAGCGGCAACGCTCCATCTGGCTACTTGCCGACAGCGCCCGCTTGGGCCAAGAGGGCGCCGAACTCCGGCG
CCCTTTTTCGTGCGTCGGTG

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MQILVRDNNVDQALRALKKKLQREGVYREMKLRRHFEKPSEKRAREKAAAVRRARKLERKRQERDGAK

Sequences:

>Translated_68_residues
MQILVRDNNVDQALRALKKKLQREGVYREMKLRRHFEKPSEKRAREKAAAVRRARKLERKRQERDGAK
>Mature_68_residues
MQILVRDNNVDQALRALKKKLQREGVYREMKLRRHFEKPSEKRAREKAAAVRRARKLERKRQERDGAK

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911
- InterPro:   IPR018278
- ProDom:   PD005521 [H]

Pfam domain/function: PF01165 Ribosomal_S21 [H]

EC number: NA

Molecular weight: Translated: 8242; Mature: 8242

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: PS01181 RIBOSOMAL_S21

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQILVRDNNVDQALRALKKKLQREGVYREMKLRRHFEKPSEKRAREKAAAVRRARKLERK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RQERDGAK
HHHCCCCC
>Mature Secondary Structure
MQILVRDNNVDQALRALKKKLQREGVYREMKLRRHFEKPSEKRAREKAAAVRRARKLERK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RQERDGAK
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA