| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200840
Identifier: 87200840
GI number: 87200840
Start: 3056332
End: 3056628
Strand: Direct
Name: 87200840
Synonym: Saro_2827
Alternate gene names: NA
Gene position: 3056332-3056628 (Clockwise)
Preceding gene: 87200839
Following gene: 87200849
Centisome position: 85.81
GC content: 63.97
Gene sequence:
>297_bases ATGTCCGTTGCCGGCACCTACACCTGCGTGACCAAGACCCCGATGGGCGACCAGACCAGCACGTTCACCGTCAACGTCGA CGGCGACACCTTCACCGGCAGCAACAGCGGCCAGATGGGCTCGATGGAAGTCGAGAACGGCAAGGTCGACGGCAATACCC TGACCTGGCAGATGAAGATGACCGTGCCGATGCCGATGACGCTGGAGTGCAAGGCGACGGTCGAGGGCGACACGCTGTCC GGCACAGTGACTGCCGGCATGTTCGGCACCTTCCCGATGAACGGGACGCGGGGGTGA
Upstream 100 bases:
>100_bases GCGCCCCTTCCCCGACCGGGAAGGGGCAAGCGGCGCACCGCCTTGCTATTGACACGTTTGTAGATAAACTCGCGCCAACG ACCACAAAGGGAGAGCATCC
Downstream 100 bases:
>100_bases GCGAAAGGCAGGGTACGGGGCAAATGCCCCGCACCCGCCCGACTTATTGAACCAAGGCTGACTTCGCTGCTCGTTCCAGA ACGTTCTCTAGTGCCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSVAGTYTCVTKTPMGDQTSTFTVNVDGDTFTGSNSGQMGSMEVENGKVDGNTLTWQMKMTVPMPMTLECKATVEGDTLS GTVTAGMFGTFPMNGTRG
Sequences:
>Translated_98_residues MSVAGTYTCVTKTPMGDQTSTFTVNVDGDTFTGSNSGQMGSMEVENGKVDGNTLTWQMKMTVPMPMTLECKATVEGDTLS GTVTAGMFGTFPMNGTRG >Mature_97_residues SVAGTYTCVTKTPMGDQTSTFTVNVDGDTFTGSNSGQMGSMEVENGKVDGNTLTWQMKMTVPMPMTLECKATVEGDTLSG TVTAGMFGTFPMNGTRG
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10266; Mature: 10135
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 10.2 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 9.3 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAGTYTCVTKTPMGDQTSTFTVNVDGDTFTGSNSGQMGSMEVENGKVDGNTLTWQMKM CCCCCEEEEEEECCCCCCCCEEEEECCCCEEECCCCCCCCEEEECCCEECCCEEEEEEEE TVPMPMTLECKATVEGDTLSGTVTAGMFGTFPMNGTRG ECCCCEEEEEEEEECCCCCCCEEEECEEEECCCCCCCC >Mature Secondary Structure SVAGTYTCVTKTPMGDQTSTFTVNVDGDTFTGSNSGQMGSMEVENGKVDGNTLTWQMKM CCCCEEEEEEECCCCCCCCEEEEECCCCEEECCCCCCCCEEEECCCEECCCEEEEEEEE TVPMPMTLECKATVEGDTLSGTVTAGMFGTFPMNGTRG ECCCCEEEEEEEEECCCCCCCEEEECEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA