| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is crcB [H]
Identifier: 87200849
GI number: 87200849
Start: 3062901
End: 3063299
Strand: Direct
Name: crcB [H]
Synonym: Saro_2836
Alternate gene names: 87200849
Gene position: 3062901-3063299 (Clockwise)
Preceding gene: 87200840
Following gene: 87200850
Centisome position: 86.0
GC content: 67.67
Gene sequence:
>399_bases ATGAACTCTCCCAATTCCCTGACGGCAACCGCCTTCGTCGCCATCGGCGGCGGCATCGGCGCGGTGCTGCGCTTTCATGC CGGACGCCTCGCCACCGCGATCGCCGGACCCAATGCCGTGTTTCCATGGGGCACTTTCGCGATCAACGTCGTCGGCAGCC TGCTGATGGGCGTGCTTGCCGGATGGCTGGCCCGCAGCGGTGGAGGCGAATCCCTGCGGCTGATGCTGGGCGTCGGCGTG CTCGGCGGCTTCACCACCTTCTCCGCGTTCAGCCTGGAAACGGCGCTGCTGGTCCAGCGCGGGACGATCGGCCTTGCGGC GCTCTATGCGGCCGGATCGGTCGTCGCGGGCGTGACCGGACTGTTCCTGGGCCTTTCGATCATGCGAGGTGTGGCATGA
Upstream 100 bases:
>100_bases CGTGCAGGACCGGCCCGAACGGGTGCGCCACTAGCCAAATCGGGCGGCAAAGGCAAGCAAACTCGTGCATTTCATGGGGC AACCGTCTAAGGGCCTGCCC
Downstream 100 bases:
>100_bases GCCGGGCCAAGATGCCGGACGATCAGGTCCGCCAGTTCACCATCGGCAAGGACGATGCGGGGGCCCGCCTCGACCGCTGG TTCAAGCGCCACCTGCCGCA
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MNSPNSLTATAFVAIGGGIGAVLRFHAGRLATAIAGPNAVFPWGTFAINVVGSLLMGVLAGWLARSGGGESLRLMLGVGV LGGFTTFSAFSLETALLVQRGTIGLAALYAAGSVVAGVTGLFLGLSIMRGVA
Sequences:
>Translated_132_residues MNSPNSLTATAFVAIGGGIGAVLRFHAGRLATAIAGPNAVFPWGTFAINVVGSLLMGVLAGWLARSGGGESLRLMLGVGV LGGFTTFSAFSLETALLVQRGTIGLAALYAAGSVVAGVTGLFLGLSIMRGVA >Mature_132_residues MNSPNSLTATAFVAIGGGIGAVLRFHAGRLATAIAGPNAVFPWGTFAINVVGSLLMGVLAGWLARSGGGESLRLMLGVGV LGGFTTFSAFSLETALLVQRGTIGLAALYAAGSVVAGVTGLFLGLSIMRGVA
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13067; Mature: 13067
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPNSLTATAFVAIGGGIGAVLRFHAGRLATAIAGPNAVFPWGTFAINVVGSLLMGVLA CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GWLARSGGGESLRLMLGVGVLGGFTTFSAFSLETALLVQRGTIGLAALYAAGSVVAGVTG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LFLGLSIMRGVA HHHHHHHHHCCC >Mature Secondary Structure MNSPNSLTATAFVAIGGGIGAVLRFHAGRLATAIAGPNAVFPWGTFAINVVGSLLMGVLA CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GWLARSGGGESLRLMLGVGVLGGFTTFSAFSLETALLVQRGTIGLAALYAAGSVVAGVTG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LFLGLSIMRGVA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA