| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200832
Identifier: 87200832
GI number: 87200832
Start: 3042799
End: 3043689
Strand: Direct
Name: 87200832
Synonym: Saro_2819
Alternate gene names: NA
Gene position: 3042799-3043689 (Clockwise)
Preceding gene: 87200831
Following gene: 87200833
Centisome position: 85.43
GC content: 67.12
Gene sequence:
>891_bases ATGACCGACCAGAACCGCATCGTAAGCTGGCACGCCAATCCGTCGAAGCCGCGCTACACCCCGCCGCCGGGCGCGGTCGA CGCGCATTGCCACGTCTTCGGCCCGATGGCGCAGTTCCCCTTCTCGGCCAAGGCCAAGTACCTGCCCGAGGACGCCGGCC CCGACATGCTCTTCGCCCTGCGCGACCACCTCGGCTTCGAGCGCAACGTGATCGTCCAGGCAAGCTGCCACGGCACCGAC AACGCCGCCACGCTTGATGCCATCGCCAGGTCGAACGGAAAGGCGCGCGGCGTCGCCGTCGTCGATCCCGCCATCTCGGA GACGGACCTCCAGGCTCTCCACGAAGGCGGCATCCGCGGCATCCGCTTCAACTTCCTCAAGCGCCTCGTCGACGATGCGC CCAAGGACAAGTTCCTCGAAGTCGCCCGGCGCCTGCCCAAGGGTTGGCACGTCGTGATCTATTTCGAGGCCGACATCCTC GAGGAACTGCGTCCGTTCATGGATGCGATCCCCGTGCCGCTGGTCATCGACCACATGGGCCGCCCCGATGTCCGCCAGGG CCCCGACGGCGCCGACATGAAGGCCTTCCGCAACTTCCTGAACAGCCGCGACGACATCTGGTTCAAGGCCACCTGCCCCG ACCGGCTCGACGCGATCAAGGAAGGCGGCGCGGGCGATCCGTGGAACGCCTTTGCCGATGCCGTCGCGCCGCTCGTTGCC GACTACCAGGACCGGGTCCTGTGGGGGACCGACTGGCCGCACCCCAACATGGACACCGAGATCCCCGACGACGGCCATCT CGTCGACATGATCCCCCGCATCGCCCCGACCGAGGAACTGCAACGCAAGCTCCTCGTCGACAATCCGATGCGGCTCTACT GGGCCGACTGA
Upstream 100 bases:
>100_bases GGGAAATGAGCTGCGTCCTCGAGACGGACGACAAGGGCGAAGTCCGCACCGCCGCCCTGCTGCGCACCGCGCGCAAGCTG ATGGATGGAGTAGTATTCGC
Downstream 100 bases:
>100_bases TCCGTGGTATGGATTGGCGCATGACATTGCGCCAATCCGCCACCGAACTCCTGATCCCCACCCCCGGCCGGGGCCTGCAC GAAATCACCCGCGAGGTGAC
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFALRDHLGFERNVIVQASCHGTD NAATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRGIRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADIL EELRPFMDAIPVPLVIDHMGRPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVA DYQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD
Sequences:
>Translated_296_residues MTDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFALRDHLGFERNVIVQASCHGTD NAATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRGIRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADIL EELRPFMDAIPVPLVIDHMGRPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVA DYQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD >Mature_295_residues TDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFALRDHLGFERNVIVQASCHGTDN AATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRGIRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADILE ELRPFMDAIPVPLVIDHMGRPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVAD YQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33134; Mature: 33003
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFAL CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHH RDHLGFERNVIVQASCHGTDNAATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRG HHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCC IRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADILEELRPFMDAIPVPLVIDHMG HHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEECCCC RPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVA CCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHH DYQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure TDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFAL CCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHH RDHLGFERNVIVQASCHGTDNAATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRG HHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCC IRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADILEELRPFMDAIPVPLVIDHMG HHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEECCCC RPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVA CCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHH DYQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA