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The map label for this gene is ybhH [H]

Identifier: 87200831

GI number: 87200831

Start: 3041744

End: 3042802

Strand: Direct

Name: ybhH [H]

Synonym: Saro_2818

Alternate gene names: 87200831

Gene position: 3041744-3042802 (Clockwise)

Preceding gene: 87200830

Following gene: 87200832

Centisome position: 85.4

GC content: 66.86

Gene sequence:

>1059_bases
ATGAGTTCACATTCAGCCCCCTGCATGTGGATGCGCGGCGGCACGTCGAAGGGCGGCTATTTCCTCAAGGACGACCTGCC
GCAGGACACCGCGCAGCGCGACGCCTTCCTGCTCGCCATGATGGGCAGCCCCGATCCCGTCCAGATCGACGGCATGGGCG
GCGCCGATCCGCTGACCAGCAAGGTCGCGGTCGTAGCCAAGTCCACCCGCGACGGCATCGACGTCGATTACCTGTTCCTG
CAGGTCTTCGTCGATCAGGCCATCGTCACCGACGCGCAGAACTGCGGCAACATCCTTGCCGGCGTCGGCCCCTTCGCCAT
CGAGCGCGGCCTTGTCGCCGCCACTGGCGATGAAACCCGCGTCGCGATCTACATGGAGAACACAGGGCAAGTCGCCGTCG
CAACGGTCAGCACGCCGGGCGGAAACGTCACCTACCAGGGCGATGCGAAGATCGACGGCGTCCCCGGCTCGCACGCCCCC
GTCCCGCTCGAATTCCGCGACACCGCCGGCTCTTCCTGCGGCGCGCTCCTGCCCACCGGCAACGCGGTCGACGTGGTGAA
CGGCGTTGCCGTCACCCTGATCGACAACGGCATGCCCTGCGTGGTGATGAAGGCGCAGGACCTCGGCATCACCGGCTACG
AGGACCGCGACTGGCTCGACAATGCAACCGAGCTGAAATCCAGGATCGAGGCGATCCGCCTGATTGTCGGCCCGATGATG
AACCTCGGCGACGTCAAGGAAAAGTCGGTCCCCAAGATGATGCTCGTCGCGCCTCCCAAGCACGGCGGCGCGGTGACGGT
GCGCAGCTTCATCCCCCATCGTGCCCACGCGACCATCGGCGTACTGGGCGCGGTCAGCGTCGCCACCGCCTGCCTCATCC
CCGGCTCCCCCGCCGCCGAGGTTGCCGAGATCCCGGAGGGCAACCGCAAGCTGCTCTCGGTCGAACACCCGACCGGGGAA
ATGAGCTGCGTCCTCGAGACGGACGACAAGGGCGAAGTCCGCACCGCCGCCCTGCTGCGCACCGCGCGCAAGCTGATGGA
TGGAGTAGTATTCGCATGA

Upstream 100 bases:

>100_bases
GTCGAGACACGGGCGCGCAGGTGTCTCGACTTCCGGCCTCCCGGGCCGGAAGCTTATTAGGAGCCCGGACGAAGGGCTCG
ACACGAACGGAGCGAATGGC

Downstream 100 bases:

>100_bases
CCGACCAGAACCGCATCGTAAGCTGGCACGCCAATCCGTCGAAGCCGCGCTACACCCCGCCGCCGGGCGCGGTCGACGCG
CATTGCCACGTCTTCGGCCC

Product: methylitaconate delta2-delta3-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSSHSAPCMWMRGGTSKGGYFLKDDLPQDTAQRDAFLLAMMGSPDPVQIDGMGGADPLTSKVAVVAKSTRDGIDVDYLFL
QVFVDQAIVTDAQNCGNILAGVGPFAIERGLVAATGDETRVAIYMENTGQVAVATVSTPGGNVTYQGDAKIDGVPGSHAP
VPLEFRDTAGSSCGALLPTGNAVDVVNGVAVTLIDNGMPCVVMKAQDLGITGYEDRDWLDNATELKSRIEAIRLIVGPMM
NLGDVKEKSVPKMMLVAPPKHGGAVTVRSFIPHRAHATIGVLGAVSVATACLIPGSPAAEVAEIPEGNRKLLSVEHPTGE
MSCVLETDDKGEVRTAALLRTARKLMDGVVFA

Sequences:

>Translated_352_residues
MSSHSAPCMWMRGGTSKGGYFLKDDLPQDTAQRDAFLLAMMGSPDPVQIDGMGGADPLTSKVAVVAKSTRDGIDVDYLFL
QVFVDQAIVTDAQNCGNILAGVGPFAIERGLVAATGDETRVAIYMENTGQVAVATVSTPGGNVTYQGDAKIDGVPGSHAP
VPLEFRDTAGSSCGALLPTGNAVDVVNGVAVTLIDNGMPCVVMKAQDLGITGYEDRDWLDNATELKSRIEAIRLIVGPMM
NLGDVKEKSVPKMMLVAPPKHGGAVTVRSFIPHRAHATIGVLGAVSVATACLIPGSPAAEVAEIPEGNRKLLSVEHPTGE
MSCVLETDDKGEVRTAALLRTARKLMDGVVFA
>Mature_351_residues
SSHSAPCMWMRGGTSKGGYFLKDDLPQDTAQRDAFLLAMMGSPDPVQIDGMGGADPLTSKVAVVAKSTRDGIDVDYLFLQ
VFVDQAIVTDAQNCGNILAGVGPFAIERGLVAATGDETRVAIYMENTGQVAVATVSTPGGNVTYQGDAKIDGVPGSHAPV
PLEFRDTAGSSCGALLPTGNAVDVVNGVAVTLIDNGMPCVVMKAQDLGITGYEDRDWLDNATELKSRIEAIRLIVGPMMN
LGDVKEKSVPKMMLVAPPKHGGAVTVRSFIPHRAHATIGVLGAVSVATACLIPGSPAAEVAEIPEGNRKLLSVEHPTGEM
SCVLETDDKGEVRTAALLRTARKLMDGVVFA

Specific function: Unknown

COG id: COG2828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yraM [H]

Homologues:

Organism=Escherichia coli, GI1786985, Length=347, Percent_Identity=45.5331412103746, Blast_Score=305, Evalue=3e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007400 [H]

Pfam domain/function: PF04303 PrpF [H]

EC number: NA

Molecular weight: Translated: 36759; Mature: 36627

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHSAPCMWMRGGTSKGGYFLKDDLPQDTAQRDAFLLAMMGSPDPVQIDGMGGADPLTS
CCCCCCCEEEEECCCCCCCEEEECCCCCCHHHCCEEEEEEECCCCCEEECCCCCCCCCCC
KVAVVAKSTRDGIDVDYLFLQVFVDQAIVTDAQNCGNILAGVGPFAIERGLVAATGDETR
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCEEEECCCCEE
VAIYMENTGQVAVATVSTPGGNVTYQGDAKIDGVPGSHAPVPLEFRDTAGSSCGALLPTG
EEEEEECCCCEEEEEEECCCCCEEEECCCEECCCCCCCCCCEEEECCCCCCCCCEECCCC
NAVDVVNGVAVTLIDNGMPCVVMKAQDLGITGYEDRDWLDNATELKSRIEAIRLIVGPMM
CEEEHHCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
NLGDVKEKSVPKMMLVAPPKHGGAVTVRSFIPHRAHATIGVLGAVSVATACLIPGSPAAE
CCCCCCHHCCCEEEEEECCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHEECCCCCHHH
VAEIPEGNRKLLSVEHPTGEMSCVLETDDKGEVRTAALLRTARKLMDGVVFA
HHHCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSHSAPCMWMRGGTSKGGYFLKDDLPQDTAQRDAFLLAMMGSPDPVQIDGMGGADPLTS
CCCCCCEEEEECCCCCCCEEEECCCCCCHHHCCEEEEEEECCCCCEEECCCCCCCCCCC
KVAVVAKSTRDGIDVDYLFLQVFVDQAIVTDAQNCGNILAGVGPFAIERGLVAATGDETR
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCEEEECCCCEE
VAIYMENTGQVAVATVSTPGGNVTYQGDAKIDGVPGSHAPVPLEFRDTAGSSCGALLPTG
EEEEEECCCCEEEEEEECCCCCEEEECCCEECCCCCCCCCCEEEECCCCCCCCCEECCCC
NAVDVVNGVAVTLIDNGMPCVVMKAQDLGITGYEDRDWLDNATELKSRIEAIRLIVGPMM
CEEEHHCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
NLGDVKEKSVPKMMLVAPPKHGGAVTVRSFIPHRAHATIGVLGAVSVATACLIPGSPAAE
CCCCCCHHCCCEEEEEECCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHEECCCCCHHH
VAEIPEGNRKLLSVEHPTGEMSCVLETDDKGEVRTAALLRTARKLMDGVVFA
HHHCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]