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The map label for this gene is visC [C]

Identifier: 87200802

GI number: 87200802

Start: 3009076

End: 3010296

Strand: Reverse

Name: visC [C]

Synonym: Saro_2789

Alternate gene names: 87200802

Gene position: 3010296-3009076 (Counterclockwise)

Preceding gene: 87200803

Following gene: 87200798

Centisome position: 84.52

GC content: 66.67

Gene sequence:

>1221_bases
GTGAATGAATTGAGCGCAGACGTCGTCATCCTGGGCGGCGGACTTGTCGGGATGACGCTGGCGATCGGCCTCGCCAAGGC
GGGGATCAGCAGCCATGTCGTCGACAATTCCGACCCTGCGGCGCAGACTGCCGAGGGATTCGATGGCCGCGCGTCGGCCA
TTTCCACGGCTAGCTGGAACCTCTACGCCAATCTTGGCATGGCCGACGAACTCGCGCCAAAGGGATGCCCGATCGAGGCG
ATCGCGGTGACAGACGCGATGAAGCCCGGACGGATCGACTTCAAGCCGGGCGAGGGCGATGGCTCGCTGGGCCGGATGTA
CGCCAACCGTGACCTGCGCATCGCCATGTATGCCGCTGCGGCGCGGGAAGAGGCGATCACCTTCCACACCAATGCCAACG
TGATCCACCGCGAGCGCGGCGAGCATGGCGTGTCGGTCACGCTTGCCGACGGGCGCATCCTCAAGGGCAGGTTGCTTGTC
GGTGCGGAAGGGCGCAGGTCTCCTACGCGCGACGAGGCGGGCTTTACCCCGGCGCGCTGGGACTATGGTCATCGTGCGAT
CATTGCCGGCCTGACCCACGAGAAGCCGCACGGCAACGTCGCGTGGGAAGTGTTCTATCCGGCCGGACCGTTTGCGCTGC
TGCCGTTGCTCGACGACGAGGACGGTTCGCATCGCTCGGCGCTGGTCTGGACAGTGGCAGAGAAGGACGCATCGGCGGTG
CTGGCGATGCCCGAGCCGATGTTCCTCGACGAAGTTTCGAAGCGGATGCACGAGATTTTCGGCGAGATCAGGCTGGCAAG
CCCGCGTTCGTCCTATCCGCTGAACTTCCATCACACCGCGCGGATCGTCGAGCAGCGCCTGGCGCTGGTGGGCGATGCGG
CGCACGGGATGCACCCGATTGCGGGGCAGGGCCTGAATGTCGGCCTGCGCGATGTGGCGGCGCTGGTCGAGGTGCTTGCG
GATGGCGTTCGGCTTGGTCTTGACGTGGGCGATGCGCAACTGCTGGCGCGCTACGAGCGTTGGCGCGCGGCTGACACGTT
CATGGTGGCGACCGCCACCGACGTCCTGACGCGGCTGTTCGGCCTGCCCGGACGAGTGCCTTCGGCGATACGGCGGCTCG
GCATGGCGGGCGTGCAGCGCATGGGACCGCTCAAGCGCTGGTTCATGGACGAGGCACGCGGGATGAGCGGCGACTTGCCC
AAGCTGCTTCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
GCCTTGCTGCACTGATCGGTCTCAAGATCCCGCAAGGTGCATTCGACGGGCGCTGTCTCGACCTCGATGGTGGCCCGGCC
AATACGTGTGGAGCAGGCAA

Downstream 100 bases:

>100_bases
GAGAGGCCAGAGCGCGGGGACTTCAGATCGCGGGTGCGGAGCCTTCGGGTGCCGGAGTCTCTTCATCGGCGGGCGGGATT
GCCGCGACGGGTTGCCCGGC

Product: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNELSADVVILGGGLVGMTLAIGLAKAGISSHVVDNSDPAAQTAEGFDGRASAISTASWNLYANLGMADELAPKGCPIEA
IAVTDAMKPGRIDFKPGEGDGSLGRMYANRDLRIAMYAAAAREEAITFHTNANVIHRERGEHGVSVTLADGRILKGRLLV
GAEGRRSPTRDEAGFTPARWDYGHRAIIAGLTHEKPHGNVAWEVFYPAGPFALLPLLDDEDGSHRSALVWTVAEKDASAV
LAMPEPMFLDEVSKRMHEIFGEIRLASPRSSYPLNFHHTARIVEQRLALVGDAAHGMHPIAGQGLNVGLRDVAALVEVLA
DGVRLGLDVGDAQLLARYERWRAADTFMVATATDVLTRLFGLPGRVPSAIRRLGMAGVQRMGPLKRWFMDEARGMSGDLP
KLLRAA

Sequences:

>Translated_406_residues
MNELSADVVILGGGLVGMTLAIGLAKAGISSHVVDNSDPAAQTAEGFDGRASAISTASWNLYANLGMADELAPKGCPIEA
IAVTDAMKPGRIDFKPGEGDGSLGRMYANRDLRIAMYAAAAREEAITFHTNANVIHRERGEHGVSVTLADGRILKGRLLV
GAEGRRSPTRDEAGFTPARWDYGHRAIIAGLTHEKPHGNVAWEVFYPAGPFALLPLLDDEDGSHRSALVWTVAEKDASAV
LAMPEPMFLDEVSKRMHEIFGEIRLASPRSSYPLNFHHTARIVEQRLALVGDAAHGMHPIAGQGLNVGLRDVAALVEVLA
DGVRLGLDVGDAQLLARYERWRAADTFMVATATDVLTRLFGLPGRVPSAIRRLGMAGVQRMGPLKRWFMDEARGMSGDLP
KLLRAA
>Mature_406_residues
MNELSADVVILGGGLVGMTLAIGLAKAGISSHVVDNSDPAAQTAEGFDGRASAISTASWNLYANLGMADELAPKGCPIEA
IAVTDAMKPGRIDFKPGEGDGSLGRMYANRDLRIAMYAAAAREEAITFHTNANVIHRERGEHGVSVTLADGRILKGRLLV
GAEGRRSPTRDEAGFTPARWDYGHRAIIAGLTHEKPHGNVAWEVFYPAGPFALLPLLDDEDGSHRSALVWTVAEKDASAV
LAMPEPMFLDEVSKRMHEIFGEIRLASPRSSYPLNFHHTARIVEQRLALVGDAAHGMHPIAGQGLNVGLRDVAALVEVLA
DGVRLGLDVGDAQLLARYERWRAADTFMVATATDVLTRLFGLPGRVPSAIRRLGMAGVQRMGPLKRWFMDEARGMSGDLP
KLLRAA

Specific function: Not Yet Known. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=397, Percent_Identity=28.7153652392947, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI32967307, Length=280, Percent_Identity=32.5, Blast_Score=141, Evalue=1e-33,
Organism=Escherichia coli, GI1789273, Length=404, Percent_Identity=32.4257425742574, Blast_Score=184, Evalue=7e-48,
Organism=Escherichia coli, GI1789274, Length=358, Percent_Identity=32.122905027933, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI1786883, Length=400, Percent_Identity=31.25, Blast_Score=175, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI25146631, Length=433, Percent_Identity=27.0207852193995, Blast_Score=154, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6321694, Length=458, Percent_Identity=24.8908296943231, Blast_Score=127, Evalue=3e-30,
Organism=Drosophila melanogaster, GI19920760, Length=427, Percent_Identity=28.3372365339578, Blast_Score=146, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43589; Mature: 43589

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELSADVVILGGGLVGMTLAIGLAKAGISSHVVDNSDPAAQTAEGFDGRASAISTASWN
CCCCCCCEEEECCCHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHCCCCCCHHEEEECCCE
LYANLGMADELAPKGCPIEAIAVTDAMKPGRIDFKPGEGDGSLGRMYANRDLRIAMYAAA
EEEECCCHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCHHHEECCCCEEEEEEEHH
AREEAITFHTNANVIHRERGEHGVSVTLADGRILKGRLLVGAEGRRSPTRDEAGFTPARW
HCCCEEEEECCCCEEEECCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
DYGHRAIIAGLTHEKPHGNVAWEVFYPAGPFALLPLLDDEDGSHRSALVWTVAEKDASAV
CCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEE
LAMPEPMFLDEVSKRMHEIFGEIRLASPRSSYPLNFHHTARIVEQRLALVGDAAHGMHPI
EECCCCHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCC
AGQGLNVGLRDVAALVEVLADGVRLGLDVGDAQLLARYERWRAADTFMVATATDVLTRLF
CCCCCCCCHHHHHHHHHHHHCHHEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH
GLPGRVPSAIRRLGMAGVQRMGPLKRWFMDEARGMSGDLPKLLRAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MNELSADVVILGGGLVGMTLAIGLAKAGISSHVVDNSDPAAQTAEGFDGRASAISTASWN
CCCCCCCEEEECCCHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHCCCCCCHHEEEECCCE
LYANLGMADELAPKGCPIEAIAVTDAMKPGRIDFKPGEGDGSLGRMYANRDLRIAMYAAA
EEEECCCHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCHHHEECCCCEEEEEEEHH
AREEAITFHTNANVIHRERGEHGVSVTLADGRILKGRLLVGAEGRRSPTRDEAGFTPARW
HCCCEEEEECCCCEEEECCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
DYGHRAIIAGLTHEKPHGNVAWEVFYPAGPFALLPLLDDEDGSHRSALVWTVAEKDASAV
CCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEE
LAMPEPMFLDEVSKRMHEIFGEIRLASPRSSYPLNFHHTARIVEQRLALVGDAAHGMHPI
EECCCCHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCC
AGQGLNVGLRDVAALVEVLADGVRLGLDVGDAQLLARYERWRAADTFMVATATDVLTRLF
CCCCCCCCHHHHHHHHHHHHCHHEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH
GLPGRVPSAIRRLGMAGVQRMGPLKRWFMDEARGMSGDLPKLLRAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]