| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is phoK [H]
Identifier: 87200803
GI number: 87200803
Start: 3010293
End: 3011990
Strand: Reverse
Name: phoK [H]
Synonym: Saro_2790
Alternate gene names: 87200803
Gene position: 3011990-3010293 (Counterclockwise)
Preceding gene: 87200805
Following gene: 87200802
Centisome position: 84.57
GC content: 67.14
Gene sequence:
>1698_bases ATGTTTCGCGTGAAGACCCTTGCCCGCTTTTCGTCATTCCTGCTTGCAACCGTTCTTCCGCTGGCGCCCGCGATCGCTCA GGAAGCGCCGCCCCCGCCCCCATCGCTGCCGATTGTCTCCCAGCAGGTGCCGCAGAACGCGCCGCGCCTTGTCGTGGCGA TCTCGATCGACCAGTTTTCTTCCGATATCTTCGCACAGTATCGCCAGCGCTTTACCGGCGGTCTTGCGCGCCTGACCACG GGCGCGGTCTTCCCCGCCGGCTACCAGAGCCACGCGGCGACCGAGACCTGCCCGGGCCACTCGACGATCCTTACCGGCAA TCGCCCCGCCCATACGGGGATCATCGCCAATTCCTGGATCGACCAGTCGGTCGCCGTCGGGCCCAAGCAGGTCTATTGCG CCGAGGATACGGGCAAGCGTGCCGCCGGATCGAAGGACTATGTCGCATCGCCCATCCACCTGCTGGTGCCGACGCTGGGC GAATGGATGAAGCGGGCCAATCCGGCGGCGCGCAATATCGCGGTATCGGGCAAGGACCGCGGCGCACTGATGATGGGCGG GCACGATACCGACCAGGTCTATTGGTGGAAGGGCAAGGGCTTCGTCACCCTTGCCGGGCGCGAGCCGGGGCCGACCGCCA TCGCGCAGAACGTCGAGATCGCGCGCACGCTCGCCAAGGGCGCGCCGGCCTTCCCGCTGCCCGCTTACTGCGGGCGCAAC GACCGGGCCGTCACCGCCGGCGAGGTGACGGTGGGGACCAACCACTTTGCCCTGAAGGCCGGCGATGCCGACGGCTTCCG CATATCGCCCCGGCTCGACCGGGCGACGCTCGATCTTGCGGTCAAGCTGGTGGACGAACAGAAGCTGGGGCGCGGCGCGG TGCCCGACCTTCTGGCGGTGAGCCTTTCGGCAACCGATTACGTTGGCCACGCCACGGGTACCGAGGGCGCGGAAATGTGC ATCCAGCTTGCGCAGCTCGACCTGGCGCTCGGCGATTTTCTTGCCAGCCTCGACAAGCGGGGCATCGACTATGCGGTGGT GCTGACGGCCGACCACGGCGGCTTTGACATTCCCGAACGCCTCCACGAGCAGGCGCTGGAGAAGAGCGCGCGGGTCGGGC CGGAAGTCTCGGCCGAGGCGCTGTCGGAGGCGCTGGGCAAGCGTTACGGGCTTGCGCCCAAGGGGCTGATCCTGGCGGAC GGGCCGGCGGGCGACTACTGGCTGCGCAAGGACCTTGACGAGGGTCTGCGCGGCAGGATCGTCGACGACGCGAAGGCGAT CCTGATGACGAGCCCCTATGTCGAGAAGGTGCTTTCCGCCGCGGAAATCGCGGCAACGCCGATGCCGTCGGGCTCGCCGG AAACCTGGACCCTGGCCGAACGCGCGCGCGCTTCCTACAACCCGCTTCACTCGGGCGATTTCGTGGTGATGCTCAAGCGC AGCGTCGTGGCGATCCCGACGCCGCGCGCGGGTTATGTGGCAACCCACGGCAGCCCCTGGGACTATGACCGCCGCGTGCC GATCATGTTTTGGCGCAAGGGCATGAACGGCTTCGAACAGCCGAGCGCGGTGGAAACGGTGGACATTGCCCCCAGCCTTG CTGCACTGATCGGTCTCAAGATCCCGCAAGGTGCATTCGACGGGCGCTGTCTCGACCTCGATGGTGGCCCGGCCAATACG TGTGGAGCAGGCAAGTGA
Upstream 100 bases:
>100_bases AGGCCCCTTGAACCGGAACGCCGCCGGGGCCATGCGTAGCGCTCTTGGGGCGTCCTACGATCGGCTTGTGCCTGAGTCCA GTTCGCGTGCCCAAAGGAGT
Downstream 100 bases:
>100_bases ATGAATTGAGCGCAGACGTCGTCATCCTGGGCGGCGGACTTGTCGGGATGACGCTGGCGATCGGCCTCGCCAAGGCGGGG ATCAGCAGCCATGTCGTCGA
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MFRVKTLARFSSFLLATVLPLAPAIAQEAPPPPPSLPIVSQQVPQNAPRLVVAISIDQFSSDIFAQYRQRFTGGLARLTT GAVFPAGYQSHAATETCPGHSTILTGNRPAHTGIIANSWIDQSVAVGPKQVYCAEDTGKRAAGSKDYVASPIHLLVPTLG EWMKRANPAARNIAVSGKDRGALMMGGHDTDQVYWWKGKGFVTLAGREPGPTAIAQNVEIARTLAKGAPAFPLPAYCGRN DRAVTAGEVTVGTNHFALKAGDADGFRISPRLDRATLDLAVKLVDEQKLGRGAVPDLLAVSLSATDYVGHATGTEGAEMC IQLAQLDLALGDFLASLDKRGIDYAVVLTADHGGFDIPERLHEQALEKSARVGPEVSAEALSEALGKRYGLAPKGLILAD GPAGDYWLRKDLDEGLRGRIVDDAKAILMTSPYVEKVLSAAEIAATPMPSGSPETWTLAERARASYNPLHSGDFVVMLKR SVVAIPTPRAGYVATHGSPWDYDRRVPIMFWRKGMNGFEQPSAVETVDIAPSLAALIGLKIPQGAFDGRCLDLDGGPANT CGAGK
Sequences:
>Translated_565_residues MFRVKTLARFSSFLLATVLPLAPAIAQEAPPPPPSLPIVSQQVPQNAPRLVVAISIDQFSSDIFAQYRQRFTGGLARLTT GAVFPAGYQSHAATETCPGHSTILTGNRPAHTGIIANSWIDQSVAVGPKQVYCAEDTGKRAAGSKDYVASPIHLLVPTLG EWMKRANPAARNIAVSGKDRGALMMGGHDTDQVYWWKGKGFVTLAGREPGPTAIAQNVEIARTLAKGAPAFPLPAYCGRN DRAVTAGEVTVGTNHFALKAGDADGFRISPRLDRATLDLAVKLVDEQKLGRGAVPDLLAVSLSATDYVGHATGTEGAEMC IQLAQLDLALGDFLASLDKRGIDYAVVLTADHGGFDIPERLHEQALEKSARVGPEVSAEALSEALGKRYGLAPKGLILAD GPAGDYWLRKDLDEGLRGRIVDDAKAILMTSPYVEKVLSAAEIAATPMPSGSPETWTLAERARASYNPLHSGDFVVMLKR SVVAIPTPRAGYVATHGSPWDYDRRVPIMFWRKGMNGFEQPSAVETVDIAPSLAALIGLKIPQGAFDGRCLDLDGGPANT CGAGK >Mature_565_residues MFRVKTLARFSSFLLATVLPLAPAIAQEAPPPPPSLPIVSQQVPQNAPRLVVAISIDQFSSDIFAQYRQRFTGGLARLTT GAVFPAGYQSHAATETCPGHSTILTGNRPAHTGIIANSWIDQSVAVGPKQVYCAEDTGKRAAGSKDYVASPIHLLVPTLG EWMKRANPAARNIAVSGKDRGALMMGGHDTDQVYWWKGKGFVTLAGREPGPTAIAQNVEIARTLAKGAPAFPLPAYCGRN DRAVTAGEVTVGTNHFALKAGDADGFRISPRLDRATLDLAVKLVDEQKLGRGAVPDLLAVSLSATDYVGHATGTEGAEMC IQLAQLDLALGDFLASLDKRGIDYAVVLTADHGGFDIPERLHEQALEKSARVGPEVSAEALSEALGKRYGLAPKGLILAD GPAGDYWLRKDLDEGLRGRIVDDAKAILMTSPYVEKVLSAAEIAATPMPSGSPETWTLAERARASYNPLHSGDFVVMLKR SVVAIPTPRAGYVATHGSPWDYDRRVPIMFWRKGMNGFEQPSAVETVDIAPSLAALIGLKIPQGAFDGRCLDLDGGPANT CGAGK
Specific function: Precipitates uranium from alkaline solutions [H]
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR002591 [H]
Pfam domain/function: PF01663 Phosphodiest [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 59956; Mature: 59956
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRVKTLARFSSFLLATVLPLAPAIAQEAPPPPPSLPIVSQQVPQNAPRLVVAISIDQFS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEEHHHHH SDIFAQYRQRFTGGLARLTTGAVFPAGYQSHAATETCPGHSTILTGNRPAHTGIIANSWI HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCC DQSVAVGPKQVYCAEDTGKRAAGSKDYVASPIHLLVPTLGEWMKRANPAARNIAVSGKDR CCHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEECCCCC GALMMGGHDTDQVYWWKGKGFVTLAGREPGPTAIAQNVEIARTLAKGAPAFPLPAYCGRN CEEEECCCCCCEEEEECCCEEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCCHHCCCC DRAVTAGEVTVGTNHFALKAGDADGFRISPRLDRATLDLAVKLVDEQKLGRGAVPDLLAV CCEEEECEEEECCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEE SLSATDYVGHATGTEGAEMCIQLAQLDLALGDFLASLDKRGIDYAVVLTADHGGFDIPER EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHH LHEQALEKSARVGPEVSAEALSEALGKRYGLAPKGLILADGPAGDYWLRKDLDEGLRGRI HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC VDDAKAILMTSPYVEKVLSAAEIAATPMPSGSPETWTLAERARASYNPLHSGDFVVMLKR CCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCCCCCCCCEEEEEEC SVVAIPTPRAGYVATHGSPWDYDRRVPIMFWRKGMNGFEQPSAVETVDIAPSLAALIGLK CEEEECCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHCC IPQGAFDGRCLDLDGGPANTCGAGK CCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MFRVKTLARFSSFLLATVLPLAPAIAQEAPPPPPSLPIVSQQVPQNAPRLVVAISIDQFS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEEHHHHH SDIFAQYRQRFTGGLARLTTGAVFPAGYQSHAATETCPGHSTILTGNRPAHTGIIANSWI HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCC DQSVAVGPKQVYCAEDTGKRAAGSKDYVASPIHLLVPTLGEWMKRANPAARNIAVSGKDR CCHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEECCCCC GALMMGGHDTDQVYWWKGKGFVTLAGREPGPTAIAQNVEIARTLAKGAPAFPLPAYCGRN CEEEECCCCCCEEEEECCCEEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCCHHCCCC DRAVTAGEVTVGTNHFALKAGDADGFRISPRLDRATLDLAVKLVDEQKLGRGAVPDLLAV CCEEEECEEEECCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEE SLSATDYVGHATGTEGAEMCIQLAQLDLALGDFLASLDKRGIDYAVVLTADHGGFDIPER EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHH LHEQALEKSARVGPEVSAEALSEALGKRYGLAPKGLILADGPAGDYWLRKDLDEGLRGRI HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC VDDAKAILMTSPYVEKVLSAAEIAATPMPSGSPETWTLAERARASYNPLHSGDFVVMLKR CCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCCCCCCCCEEEEEEC SVVAIPTPRAGYVATHGSPWDYDRRVPIMFWRKGMNGFEQPSAVETVDIAPSLAALIGLK CEEEECCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHCC IPQGAFDGRCLDLDGGPANTCGAGK CCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA