| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200770
Identifier: 87200770
GI number: 87200770
Start: 2979133
End: 2979390
Strand: Reverse
Name: 87200770
Synonym: Saro_2757
Alternate gene names: NA
Gene position: 2979390-2979133 (Counterclockwise)
Preceding gene: 87200771
Following gene: 87200769
Centisome position: 83.65
GC content: 58.53
Gene sequence:
>258_bases GTGTGGCAGTCTGCCTATGGGCACCGGGCGAACAAAGCAACATGGCTTTACTACGTCGGAGAGCGAGCGCCATTTCAACT TCGATGGGAGCGCCCGGTCGGATCTCATCAAGTAGGGTTTCACGACCAACGCGGCAAGGCGCGCAATAAGCCAACGCTTA ACAAGCGTGAGGCTAACGCAACTCCACCCGACTTTCGCGACACGCTGATTGCTCTCGCGCTGTGGTCATACCCGCAGGCA CTCAGCCTTGCCGCATGA
Upstream 100 bases:
>100_bases GCCGCCACCGTGCTCTTCTGGCTGTGATCAGTGAGTCCTGAGCCTAGACCGTCCTGCCCGTCATGGGTGGGCAAGAAGTT GCAAGGGATGGGTCTGCGAG
Downstream 100 bases:
>100_bases CGCACCCCCACCCCGGAGCCACGAGCATGACCGGCATGTCGGCTGAGGAGGTCAAGCCGCTCGCGTCGCTAATCGAGCGT GCGGTGGAGAAGTTTGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MWQSAYGHRANKATWLYYVGERAPFQLRWERPVGSHQVGFHDQRGKARNKPTLNKREANATPPDFRDTLIALALWSYPQA LSLAA
Sequences:
>Translated_85_residues MWQSAYGHRANKATWLYYVGERAPFQLRWERPVGSHQVGFHDQRGKARNKPTLNKREANATPPDFRDTLIALALWSYPQA LSLAA >Mature_85_residues MWQSAYGHRANKATWLYYVGERAPFQLRWERPVGSHQVGFHDQRGKARNKPTLNKREANATPPDFRDTLIALALWSYPQA LSLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9781; Mature: 9781
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQSAYGHRANKATWLYYVGERAPFQLRWERPVGSHQVGFHDQRGKARNKPTLNKREANA CCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPPDFRDTLIALALWSYPQALSLAA CCCCHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure MWQSAYGHRANKATWLYYVGERAPFQLRWERPVGSHQVGFHDQRGKARNKPTLNKREANA CCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPPDFRDTLIALALWSYPQALSLAA CCCCHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA