| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200756
Identifier: 87200756
GI number: 87200756
Start: 2968197
End: 2968664
Strand: Direct
Name: 87200756
Synonym: Saro_2743
Alternate gene names: NA
Gene position: 2968197-2968664 (Clockwise)
Preceding gene: 87200755
Following gene: 87200757
Centisome position: 83.34
GC content: 60.47
Gene sequence:
>468_bases ATGGCCGATCTAACTGTCCAGGTCGTCGACCAGCAAGTCGTCGTGCAGCCCTTCGGTAGCGACGCATTGGTCCCGCTCGT TGCTGCCGCCAATCAGGCGCTGACAGATGCCGAAGCCGCCGCCGCTGCTGCCTCTGCCTCGGTCGGCGCGGTGAAGCAGA ACATCACGGCGTTCCTTGGTGCGGATACCGGCATCGTAGAGGGTGCATGGTACGCTGAATACTTCATCCCTGTCGCGACG ACCTTCACCAGCTTCAAGGGTATCCTGATCAGCGGGACGGGTACGTTCGAGCTTCGCGTGCTGGTAAACGACGTGGACGT TTACGGTCCTCGCACGATCAGTTCGACGCTCAATAGCGCCACCATTTCGCTCGCCGTCGCGGCAAATGACCGCGTGTCGT TCCAGGTCAACAACATCACCGGAACGCCGATCCTTGCCGAAATTCAGCTTCTGGGGCTGCCCACATGA
Upstream 100 bases:
>100_bases ACTTTGTGGCTGTCTGGGATCTGGTGATCGGGTCGGGAAGTGCAAAGGCGCGCTGGCTCGAAGGCACCTTCATCGTGCAC GGAGGTTCGACGCAACTCTG
Downstream 100 bases:
>100_bases GCACTGTGAACTATTTCGGCTTTGATCCGAACGCGCCTTCGGTCGCCCTCATCGCCGGTCCCGAGTTCCGCGACGACTTC ACCACGTCTGGCAACCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MADLTVQVVDQQVVVQPFGSDALVPLVAAANQALTDAEAAAAAASASVGAVKQNITAFLGADTGIVEGAWYAEYFIPVAT TFTSFKGILISGTGTFELRVLVNDVDVYGPRTISSTLNSATISLAVAANDRVSFQVNNITGTPILAEIQLLGLPT
Sequences:
>Translated_155_residues MADLTVQVVDQQVVVQPFGSDALVPLVAAANQALTDAEAAAAAASASVGAVKQNITAFLGADTGIVEGAWYAEYFIPVAT TFTSFKGILISGTGTFELRVLVNDVDVYGPRTISSTLNSATISLAVAANDRVSFQVNNITGTPILAEIQLLGLPT >Mature_154_residues ADLTVQVVDQQVVVQPFGSDALVPLVAAANQALTDAEAAAAAASASVGAVKQNITAFLGADTGIVEGAWYAEYFIPVATT FTSFKGILISGTGTFELRVLVNDVDVYGPRTISSTLNSATISLAVAANDRVSFQVNNITGTPILAEIQLLGLPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15944; Mature: 15813
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLTVQVVDQQVVVQPFGSDALVPLVAAANQALTDAEAAAAAASASVGAVKQNITAFLG CCCEEEEEECCEEEEEECCCCCHHHHHHHCCCHHCCHHHHHHHHHCHHHHHHHCCEEEEC ADTGIVEGAWYAEYFIPVATTFTSFKGILISGTGTFELRVLVNDVDVYGPRTISSTLNSA CCCCEECCCEEEEEEEEHHHHHCCCCCEEEECCCCEEEEEEEEEECCCCCCHHHHCCCCE TISLAVAANDRVSFQVNNITGTPILAEIQLLGLPT EEEEEEEECCEEEEEECCEECCCEEEEEEEEECCC >Mature Secondary Structure ADLTVQVVDQQVVVQPFGSDALVPLVAAANQALTDAEAAAAAASASVGAVKQNITAFLG CCEEEEEECCEEEEEECCCCCHHHHHHHCCCHHCCHHHHHHHHHCHHHHHHHCCEEEEC ADTGIVEGAWYAEYFIPVATTFTSFKGILISGTGTFELRVLVNDVDVYGPRTISSTLNSA CCCCEECCCEEEEEEEEHHHHHCCCCCEEEECCCCEEEEEEEEEECCCCCCHHHHCCCCE TISLAVAANDRVSFQVNNITGTPILAEIQLLGLPT EEEEEEEECCEEEEEECCEECCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA