| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200714
Identifier: 87200714
GI number: 87200714
Start: 2938511
End: 2938951
Strand: Direct
Name: 87200714
Synonym: Saro_2701
Alternate gene names: NA
Gene position: 2938511-2938951 (Clockwise)
Preceding gene: 87200704
Following gene: 87200718
Centisome position: 82.51
GC content: 68.93
Gene sequence:
>441_bases GTGCGCCGCGAGGTGGCGGCGGCTGCGGAAGGGGGCGTCAGTCACAGCCATTCCCGGTTCAGCTCAGCCCAGCGCGCCTC GCCCATTTCGCGTCGGGCGCGGCGGACATGCCGGTTCATGGAGTGGCTCGGGGTCCATTCCGGATCGCCCTGCTGCGCCG GAATGATGCGAGCGTCCGTCACGCTCGCCAGAATGCGGGTCGGGGAACGGTGGGCCATATCAGCGGCTCCCGATGCGCTG GCCGCAGTGGTCGCAGCGGGTGGGCTCGACGCCGTAGATTGCGTCGAAATAGGGCTTCATGCGGATGCGCCATGCGCGGG CCTCGGCAAGGCGTTGCTCGCGCGTAGCGCGGTCGAGGTAGCGTCCGGTCGCCATCACGCCGCGAGCCTCCGATCCGTCA GGCTCAGCAGGCGAGTTTCAATCGCCGTCTTGATCGCCTGA
Upstream 100 bases:
>100_bases TGGATGGCGTGGGCGGTCACTTCACAAGCACTCCGAAAAGCACGGCCACGAACGGCACGAGGGCCAGTCCGCCGACCAGG GTGAAAAGGATGAGGGCGAG
Downstream 100 bases:
>100_bases AGCAGCGCCTCGCTATCTGCGAGGGCATCGCGGGGAAGTTCGTCGACGCACTGACAGACGAAGCAGTCATATCCCGGCAC GTGCACTTCCGACCCGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRREVAAAAEGGVSHSHSRFSSAQRASPISRRARRTCRFMEWLGVHSGSPCCAGMMRASVTLARMRVGERWAISAAPDAL AAVVAAGGLDAVDCVEIGLHADAPCAGLGKALLARSAVEVASGRHHAASLRSVRLSRRVSIAVLIA
Sequences:
>Translated_146_residues MRREVAAAAEGGVSHSHSRFSSAQRASPISRRARRTCRFMEWLGVHSGSPCCAGMMRASVTLARMRVGERWAISAAPDAL AAVVAAGGLDAVDCVEIGLHADAPCAGLGKALLARSAVEVASGRHHAASLRSVRLSRRVSIAVLIA >Mature_146_residues MRREVAAAAEGGVSHSHSRFSSAQRASPISRRARRTCRFMEWLGVHSGSPCCAGMMRASVTLARMRVGERWAISAAPDAL AAVVAAGGLDAVDCVEIGLHADAPCAGLGKALLARSAVEVASGRHHAASLRSVRLSRRVSIAVLIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15225; Mature: 15225
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRREVAAAAEGGVSHSHSRFSSAQRASPISRRARRTCRFMEWLGVHSGSPCCAGMMRASV CCCCHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TLARMRVGERWAISAAPDALAAVVAAGGLDAVDCVEIGLHADAPCAGLGKALLARSAVEV HHHHHHCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ASGRHHAASLRSVRLSRRVSIAVLIA HCCCHHHHHHHHHHHHCCEEEEEEEC >Mature Secondary Structure MRREVAAAAEGGVSHSHSRFSSAQRASPISRRARRTCRFMEWLGVHSGSPCCAGMMRASV CCCCHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TLARMRVGERWAISAAPDALAAVVAAGGLDAVDCVEIGLHADAPCAGLGKALLARSAVEV HHHHHHCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ASGRHHAASLRSVRLSRRVSIAVLIA HCCCHHHHHHHHHHHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA