| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is kefBC [H]
Identifier: 87200704
GI number: 87200704
Start: 2931041
End: 2932786
Strand: Direct
Name: kefBC [H]
Synonym: Saro_2691
Alternate gene names: 87200704
Gene position: 2931041-2932786 (Clockwise)
Preceding gene: 87200700
Following gene: 87200714
Centisome position: 82.3
GC content: 66.21
Gene sequence:
>1746_bases ATGGCCGAACATTCCTCACTGCTGCGCGACGGCTTCCTCCTCCTCGGCTTCGCGCTGATCTTCGTGCTGGTGTTCCGGCG CCTGGGCCTTGGCGCGACGCTGGGCTATCTCCTTGCCGGCGCGGTCGTCGGCCCGCAGGTTCTGGGGCTGGTCGGCGATG CGGAGAGCAAGCTGGGCATTGCGGAACTTGGCATCACGCTGCTGCTGTTCCTCGTGGGGCTGGAACTGAACCCTTCGCGG CTGTGGCGGATGAAGCGCGACATCCTCGGCCTCGGCCTGTTGCAGGTGACCGCCTGCGGCCTCGCGGTAGCGGCGATGAT CGGACTGACGACAGAGTTCAGTTGGGAAGCGGCGCTGGCGCTGGGCCTGCCACTGGCGCTTTCATCGACCGCGCAGGTGC TGCCGATGCTCCAGTCCTCGGGAAGGCTGCGCACCCCGTTCGGGGAACGGGCCTTCGCGATCCTGCTGTTCCAGGACCTT TCGATCATCCCGCTCATCACGATCATTTCCGCGATGAGCCGCAATCCGGCCGATGCGGGCGGACCTCCGGGCTGGCTGCT TACGCTGTACACCCTGGCGGCGGTGGTTGCGCTGATCGCGGCGGGACGTTTCGTCATCAGGCCGTTGTTTCGCCTGATCG GCAACCTTGGCGAACGCGAGATGTTCGTCGTGGCGGCGCTGTTCACGGTCATGGCATCGGCCGCAGTCATGGAAGCGCTG GGCCTTTCCACCGCTCTCGGCGCGTTCGTGGCAGGCGTGATGCTGGCCGACAGCCCCTATCGCCACGAACTGGAAGCCGA TGTCGAGCCGTTCCGTTCGATCCTGCTCGGCCTGTTCTTCCTGGCCGTGGGAATGATGCTGAACCTCCACGCCATTGCCG AGCGGCCGCTGTTCGTGCTCGCCATGGCGGTGGGGCTGATCGCGATCAAGGCGGGAGCCATCTTCCTCATCGGTCTTGCC TTCCGCATGACATGGCGAGGGGCGCTGGCGCTGGGCCTGCTGCTGAGCCAGGGCGGCGAGTTCGGGTTCGTGCTGTTCGC GCAGGCCCAGAACGCGCTGCTGATCGCGCCCGATGCCGCCAGCCTGTTCGGCGCGATCGTGACGCTTTCGATGGCGACCA CGCCCTTCCTGATGATGGCCACGCGCGGCATCCGCGAGGAAGCCGAGAGCCCGAAGGGCGAACGGGCTGGCCCCCAACCA GATGGCGCGAACGCGATCATCGTCGGCTTCGGGCGCTTTGGCCAGGGCGTGAGCCAGATTCTGCTCGCCAGCAACATCCC CGTCACCATGGTCGATACCGACATCGAGATGATCGACGTGGCGGCCGAATTCGGCGCGAAAGTCTATTTCGGCGATGGCA CGCGCATCGACCTGCTGCGCCAGGCTGGCGCGGACGAGGCGGAGATGATCTTCTTCTGCATGGACGGCGATCAGATGTCG CCCGACCTGGTCGAGGCAGTGCACGAAGCCTTCCCGCGCGCGGCGATCTATGTTCGCGCCTATGACCGGCGCGCGCTTAT CCGCCTCAAGGAAACGCCTGCCAGCGCGGTGGTGCGCGAGGTTCTGGAATCGGCGGTGAAGATGGCGCGCATCGCGCTGC ACGACGCCGGCCTCTCGGAAGAGGCGATCAACCGCGCCGAGGACATGTTCCGGGCACGCGACAAGGAACGGCTGAGGCTG CAGGTCGAAGCGGGCGACGTGCGGGTGGCACGCGACAGGATCATCACCGAACCGTCTGGCTCATGA
Upstream 100 bases:
>100_bases GGCGGCCGAGCCTGCCAGACCGGACGGATCTTCACCAGAGGCAGATCAACGCAGGCTGAACGGCGGTTGCGGCGCGATGC GATAGGGCTAAACAGGAGGA
Downstream 100 bases:
>100_bases CCGCAAGCCGCCGTGGGCAAGCCCGGCAAACTTCGGCGCCTGACCCGGTTGACTGCTTGGCCCAAACCGCGCATTAGCGC GGTCGCACAGGGGCGGTTAG
Product: sodium/hydrogen exchanger
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MAEHSSLLRDGFLLLGFALIFVLVFRRLGLGATLGYLLAGAVVGPQVLGLVGDAESKLGIAELGITLLLFLVGLELNPSR LWRMKRDILGLGLLQVTACGLAVAAMIGLTTEFSWEAALALGLPLALSSTAQVLPMLQSSGRLRTPFGERAFAILLFQDL SIIPLITIISAMSRNPADAGGPPGWLLTLYTLAAVVALIAAGRFVIRPLFRLIGNLGEREMFVVAALFTVMASAAVMEAL GLSTALGAFVAGVMLADSPYRHELEADVEPFRSILLGLFFLAVGMMLNLHAIAERPLFVLAMAVGLIAIKAGAIFLIGLA FRMTWRGALALGLLLSQGGEFGFVLFAQAQNALLIAPDAASLFGAIVTLSMATTPFLMMATRGIREEAESPKGERAGPQP DGANAIIVGFGRFGQGVSQILLASNIPVTMVDTDIEMIDVAAEFGAKVYFGDGTRIDLLRQAGADEAEMIFFCMDGDQMS PDLVEAVHEAFPRAAIYVRAYDRRALIRLKETPASAVVREVLESAVKMARIALHDAGLSEEAINRAEDMFRARDKERLRL QVEAGDVRVARDRIITEPSGS
Sequences:
>Translated_581_residues MAEHSSLLRDGFLLLGFALIFVLVFRRLGLGATLGYLLAGAVVGPQVLGLVGDAESKLGIAELGITLLLFLVGLELNPSR LWRMKRDILGLGLLQVTACGLAVAAMIGLTTEFSWEAALALGLPLALSSTAQVLPMLQSSGRLRTPFGERAFAILLFQDL SIIPLITIISAMSRNPADAGGPPGWLLTLYTLAAVVALIAAGRFVIRPLFRLIGNLGEREMFVVAALFTVMASAAVMEAL GLSTALGAFVAGVMLADSPYRHELEADVEPFRSILLGLFFLAVGMMLNLHAIAERPLFVLAMAVGLIAIKAGAIFLIGLA FRMTWRGALALGLLLSQGGEFGFVLFAQAQNALLIAPDAASLFGAIVTLSMATTPFLMMATRGIREEAESPKGERAGPQP DGANAIIVGFGRFGQGVSQILLASNIPVTMVDTDIEMIDVAAEFGAKVYFGDGTRIDLLRQAGADEAEMIFFCMDGDQMS PDLVEAVHEAFPRAAIYVRAYDRRALIRLKETPASAVVREVLESAVKMARIALHDAGLSEEAINRAEDMFRARDKERLRL QVEAGDVRVARDRIITEPSGS >Mature_580_residues AEHSSLLRDGFLLLGFALIFVLVFRRLGLGATLGYLLAGAVVGPQVLGLVGDAESKLGIAELGITLLLFLVGLELNPSRL WRMKRDILGLGLLQVTACGLAVAAMIGLTTEFSWEAALALGLPLALSSTAQVLPMLQSSGRLRTPFGERAFAILLFQDLS IIPLITIISAMSRNPADAGGPPGWLLTLYTLAAVVALIAAGRFVIRPLFRLIGNLGEREMFVVAALFTVMASAAVMEALG LSTALGAFVAGVMLADSPYRHELEADVEPFRSILLGLFFLAVGMMLNLHAIAERPLFVLAMAVGLIAIKAGAIFLIGLAF RMTWRGALALGLLLSQGGEFGFVLFAQAQNALLIAPDAASLFGAIVTLSMATTPFLMMATRGIREEAESPKGERAGPQPD GANAIIVGFGRFGQGVSQILLASNIPVTMVDTDIEMIDVAAEFGAKVYFGDGTRIDLLRQAGADEAEMIFFCMDGDQMSP DLVEAVHEAFPRAAIYVRAYDRRALIRLKETPASAVVREVLESAVKMARIALHDAGLSEEAINRAEDMFRARDKERLRLQ VEAGDVRVARDRIITEPSGS
Specific function: Transport system that facilitate potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=547, Percent_Identity=38.7568555758684, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI1789749, Length=576, Percent_Identity=38.7152777777778, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI1786685, Length=538, Percent_Identity=27.8810408921933, Blast_Score=136, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 62039; Mature: 61908
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHSSLLRDGFLLLGFALIFVLVFRRLGLGATLGYLLAGAVVGPQVLGLVGDAESKLGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCH AELGITLLLFLVGLELNPSRLWRMKRDILGLGLLQVTACGLAVAAMIGLTTEFSWEAALA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LGLPLALSSTAQVLPMLQSSGRLRTPFGERAFAILLFQDLSIIPLITIISAMSRNPADAG HCCCHHHCHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHCCHHHHHHHHHHHHCCCCCCCC GPPGWLLTLYTLAAVVALIAAGRFVIRPLFRLIGNLGEREMFVVAALFTVMASAAVMEAL CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GLSTALGAFVAGVMLADSPYRHELEADVEPFRSILLGLFFLAVGMMLNLHAIAERPLFVL HHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AMAVGLIAIKAGAIFLIGLAFRMTWRGALALGLLLSQGGEFGFVLFAQAQNALLIAPDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCHH SLFGAIVTLSMATTPFLMMATRGIREEAESPKGERAGPQPDGANAIIVGFGRFGQGVSQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH LLASNIPVTMVDTDIEMIDVAAEFGAKVYFGDGTRIDLLRQAGADEAEMIFFCMDGDQMS HHHCCCCEEEEECCHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCEEEEEEECCCCCC PDLVEAVHEAFPRAAIYVRAYDRRALIRLKETPASAVVREVLESAVKMARIALHDAGLSE HHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCH EAINRAEDMFRARDKERLRLQVEAGDVRVARDRIITEPSGS HHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHCCCCCCCC >Mature Secondary Structure AEHSSLLRDGFLLLGFALIFVLVFRRLGLGATLGYLLAGAVVGPQVLGLVGDAESKLGI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCH AELGITLLLFLVGLELNPSRLWRMKRDILGLGLLQVTACGLAVAAMIGLTTEFSWEAALA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LGLPLALSSTAQVLPMLQSSGRLRTPFGERAFAILLFQDLSIIPLITIISAMSRNPADAG HCCCHHHCHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHCCHHHHHHHHHHHHCCCCCCCC GPPGWLLTLYTLAAVVALIAAGRFVIRPLFRLIGNLGEREMFVVAALFTVMASAAVMEAL CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GLSTALGAFVAGVMLADSPYRHELEADVEPFRSILLGLFFLAVGMMLNLHAIAERPLFVL HHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AMAVGLIAIKAGAIFLIGLAFRMTWRGALALGLLLSQGGEFGFVLFAQAQNALLIAPDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCHH SLFGAIVTLSMATTPFLMMATRGIREEAESPKGERAGPQPDGANAIIVGFGRFGQGVSQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH LLASNIPVTMVDTDIEMIDVAAEFGAKVYFGDGTRIDLLRQAGADEAEMIFFCMDGDQMS HHHCCCCEEEEECCHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCEEEEEEECCCCCC PDLVEAVHEAFPRAAIYVRAYDRRALIRLKETPASAVVREVLESAVKMARIALHDAGLSE HHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCH EAINRAEDMFRARDKERLRLQVEAGDVRVARDRIITEPSGS HHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]