Click here to switch to the map view.

The map label for this gene is 87200705

Identifier: 87200705

GI number: 87200705

Start: 2932972

End: 2934186

Strand: Reverse

Name: 87200705

Synonym: Saro_2692

Alternate gene names: NA

Gene position: 2934186-2932972 (Counterclockwise)

Preceding gene: 87200706

Following gene: 87200703

Centisome position: 82.38

GC content: 62.96

Gene sequence:

>1215_bases
ATGCCCCGCGACAAGTTCACCGTCGGCGATTTCTGGCTCGACAAGCGGCGGGATGGGCTCGCACCAGACATCTGGCAGAT
CGCAACCTACAAGCCGGGAACGCGCTCCGTTGTCTATCGCAGCACTAAGTGCCGTACGGACGAACTAGATCGCGCCCAAG
CCGTCCTGCGCGCCCACGAGGCAGCGCAACGCTCCAAGACAAGGCAGGGCATCGAGGAGGCCGAGTTGATCCCGCAGTTG
CTCAACTACGTGAACGAGCATGGGCCCGACGTGCTTCGCCTGGACACTGTGGAATCGTCGTTCCGTGCGTGGGTCGGCTT
TCTCGAGCAAGATGAACTGACAACCGGCGCGCGCGTCGCCGACATCGATAAGGTTTCCGTCACCCGCTTCCGTCGCTGGC
GCATGGGGCCGCACGAGTGGAACCTGCAATGGTGGGACGGAAAGACCTACAAGCACAAGAGTAAGGGCGTCTCCGGTGAG
GCGGTGCAGCGGAATATCGAAGACCTGCGATCCGCCTTGAACCATGCCGAGGCCGCCCGACGTATCCCGCAGGCGCCTCG
AGTGCCCAGCGTCGACAAGTCGCTGCGGTCGAAGAGCCGCAAGCACCTGCTCACCGTGAAGCAGCTCGGCGCGTTGATCG
CCTATTCGGATCACGACAAAGGCGCGCAGCAATGGCTCTGGCTGATGATCGCCACCGGCGCCCGGCCCGATGCGGCACTG
GCATTCGATCCGGCGAAGCAATGGCACGGAGCGGTGATCGATCTGCATCCTGAGGGCGCGCCTGTAACCGACAAGCGCAA
TCCCGTCGTGCCGGCAATCGAGCCGCTGCGGCCGATCCTCGAAGGGTGGAAGCTGGACAAGGTGAAGTCGCGCAAGCGGT
TCTGGCGAACGGCGCGGGCCAAGCTCGGCATTCCAGTGACGCACGTCCCGAAGACGATTCGCCACACTGTGGCATCGCAC
CTGCGCAACGCGAACGTCCCGGGCGAGCAGATCAGCCTGCTACTCGGCCACAAGGACCAGGGCGACACGCTGGCGCTGAC
ATCGGAGATCTATGCGCATGGCGATCCGCTCAAGATGCGGAAAGCGATTCAGGCGCTGACCAGTTTCTTCCGGTCTGTGG
AGAAGGAAGCGGCCCGGTGGCGTGCTGACCATTCGCTGACCATTACCGCCGACAACAACAAGATTATCGTTGACCGTAGG
GCAGCGAAAACGTAG

Upstream 100 bases:

>100_bases
GCAACGAGACCGGCCTAACCTTGACCTCCGAGCAGATTCGGGAACTGGTTTCCCGGCACGGCCTGCTTGAGACCCTATCC
CGTGCGGAGACCGAAGAATT

Downstream 100 bases:

>100_bases
TATTTCCGGGCCTTTTGAATGGTGGGCGGTGACGGGCTCGAACCGCCGACCCTCTCGGTGTAAACGAGATGCTCTACCAA
CTGAGCTAACCGCCCCTGTG

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase; Integrase Family Protein

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MPRDKFTVGDFWLDKRRDGLAPDIWQIATYKPGTRSVVYRSTKCRTDELDRAQAVLRAHEAAQRSKTRQGIEEAELIPQL
LNYVNEHGPDVLRLDTVESSFRAWVGFLEQDELTTGARVADIDKVSVTRFRRWRMGPHEWNLQWWDGKTYKHKSKGVSGE
AVQRNIEDLRSALNHAEAARRIPQAPRVPSVDKSLRSKSRKHLLTVKQLGALIAYSDHDKGAQQWLWLMIATGARPDAAL
AFDPAKQWHGAVIDLHPEGAPVTDKRNPVVPAIEPLRPILEGWKLDKVKSRKRFWRTARAKLGIPVTHVPKTIRHTVASH
LRNANVPGEQISLLLGHKDQGDTLALTSEIYAHGDPLKMRKAIQALTSFFRSVEKEAARWRADHSLTITADNNKIIVDRR
AAKT

Sequences:

>Translated_404_residues
MPRDKFTVGDFWLDKRRDGLAPDIWQIATYKPGTRSVVYRSTKCRTDELDRAQAVLRAHEAAQRSKTRQGIEEAELIPQL
LNYVNEHGPDVLRLDTVESSFRAWVGFLEQDELTTGARVADIDKVSVTRFRRWRMGPHEWNLQWWDGKTYKHKSKGVSGE
AVQRNIEDLRSALNHAEAARRIPQAPRVPSVDKSLRSKSRKHLLTVKQLGALIAYSDHDKGAQQWLWLMIATGARPDAAL
AFDPAKQWHGAVIDLHPEGAPVTDKRNPVVPAIEPLRPILEGWKLDKVKSRKRFWRTARAKLGIPVTHVPKTIRHTVASH
LRNANVPGEQISLLLGHKDQGDTLALTSEIYAHGDPLKMRKAIQALTSFFRSVEKEAARWRADHSLTITADNNKIIVDRR
AAKT
>Mature_403_residues
PRDKFTVGDFWLDKRRDGLAPDIWQIATYKPGTRSVVYRSTKCRTDELDRAQAVLRAHEAAQRSKTRQGIEEAELIPQLL
NYVNEHGPDVLRLDTVESSFRAWVGFLEQDELTTGARVADIDKVSVTRFRRWRMGPHEWNLQWWDGKTYKHKSKGVSGEA
VQRNIEDLRSALNHAEAARRIPQAPRVPSVDKSLRSKSRKHLLTVKQLGALIAYSDHDKGAQQWLWLMIATGARPDAALA
FDPAKQWHGAVIDLHPEGAPVTDKRNPVVPAIEPLRPILEGWKLDKVKSRKRFWRTARAKLGIPVTHVPKTIRHTVASHL
RNANVPGEQISLLLGHKDQGDTLALTSEIYAHGDPLKMRKAIQALTSFFRSVEKEAARWRADHSLTITADNNKIIVDRRA
AKT

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45852; Mature: 45721

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDKFTVGDFWLDKRRDGLAPDIWQIATYKPGTRSVVYRSTKCRTDELDRAQAVLRAHE
CCCCCCEECHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
AAQRSKTRQGIEEAELIPQLLNYVNEHGPDVLRLDTVESSFRAWVGFLEQDELTTGARVA
HHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEE
DIDKVSVTRFRRWRMGPHEWNLQWWDGKTYKHKSKGVSGEAVQRNIEDLRSALNHAEAAR
CCCHHHHHHHHHHCCCCCCCCEEEECCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RIPQAPRVPSVDKSLRSKSRKHLLTVKQLGALIAYSDHDKGAQQWLWLMIATGARPDAAL
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHEEHEEECCCCCCCEE
AFDPAKQWHGAVIDLHPEGAPVTDKRNPVVPAIEPLRPILEGWKLDKVKSRKRFWRTARA
EECCHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KLGIPVTHVPKTIRHTVASHLRNANVPGEQISLLLGHKDQGDTLALTSEIYAHGDPLKMR
HCCCCHHHCCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCEEEEEHHHHHCCCHHHHH
KAIQALTSFFRSVEKEAARWRADHSLTITADNNKIIVDRRAAKT
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCC
>Mature Secondary Structure 
PRDKFTVGDFWLDKRRDGLAPDIWQIATYKPGTRSVVYRSTKCRTDELDRAQAVLRAHE
CCCCCEECHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
AAQRSKTRQGIEEAELIPQLLNYVNEHGPDVLRLDTVESSFRAWVGFLEQDELTTGARVA
HHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEE
DIDKVSVTRFRRWRMGPHEWNLQWWDGKTYKHKSKGVSGEAVQRNIEDLRSALNHAEAAR
CCCHHHHHHHHHHCCCCCCCCEEEECCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RIPQAPRVPSVDKSLRSKSRKHLLTVKQLGALIAYSDHDKGAQQWLWLMIATGARPDAAL
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHEEHEEECCCCCCCEE
AFDPAKQWHGAVIDLHPEGAPVTDKRNPVVPAIEPLRPILEGWKLDKVKSRKRFWRTARA
EECCHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KLGIPVTHVPKTIRHTVASHLRNANVPGEQISLLLGHKDQGDTLALTSEIYAHGDPLKMR
HCCCCHHHCCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCEEEEEHHHHHCCCHHHHH
KAIQALTSFFRSVEKEAARWRADHSLTITADNNKIIVDRRAAKT
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA