Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200703

Identifier: 87200703

GI number: 87200703

Start: 2929417

End: 2930913

Strand: Reverse

Name: 87200703

Synonym: Saro_2690

Alternate gene names: NA

Gene position: 2930913-2929417 (Counterclockwise)

Preceding gene: 87200705

Following gene: 87200702

Centisome position: 82.29

GC content: 66.2

Gene sequence:

>1497_bases
ATGCACAAGTTCCTGTTTCTGGTCGCGGCCGCAATCCCGGCCGCAATCCCGGCCACAGTCCCGGTCGCGGCAAGTGCCCA
ATCCCCGCAGTCAGCCCAGGGCGACGTCTCGCTCACCATCTATAACAACGACCTCGCGCTCGTGCAGGACGTTCGCCAGA
TGAACCTCGCGCTTGGCCGCACCCGGCAGGAGTTTCCCGATGTCTCCGCCGCGATCCGGCCCGAAACCGTCACCCTCAAC
GCTGGCGGCACCGGCATTGTCGAACAGAACTTCGACTATGACCTGCTGACCCCGGAAAAGCTGATGGACAAGGCCGTCGG
GCAGACGGTCACGCTCGTGCGCACCAATCCGGCTACCGGCGCCGAAACGCGCGAGACGGCGACGATCCTGGCGAACAACG
GCGGCACAATCGTGCGGGTGGGTGACCGCATCGAGGTACTGAACACATATGGCGCGCGCGTCGTCTTTCCGACGCTGCCG
GCGGGGCTGCGCGCCCGGCCGACGCTTTCGGTCACGCTCGATACCACCAGCCCCGGCATCCGTCCGGTCACGCTCAACTA
CCTCTCGCGCGGCTTCGGCTGGAAGGCGGATTACGTTGCCCTGTTCGATGAGGCCGCAGGCAGGATCGACGTCCAGGGCT
GGATCACGCTGTCCAACAACAGCGGCACCACCTTCGACAAGGCGCGCGTGCTGCTGGTCGCCGGCTCCGTCGGTGATGGC
AACCAGGGGTACGACCAGGGCTATCGTCGCCCCCGTCCCGCGATGCCGGGCAACCGTCCCGGCATCGAAAGCGCCAGCCG
CGAAAGCCTTGGCGATTTCTATGTCTATCCGATCGCGGGCCGTACCACGGTCGCCAATGCCCAGCAGAAGCAGGTGAGCT
TCCTCGACGTTGCGGGGGCGTCGGCATCGAAGGCCTATCACTTCCGCAACGGATGGCTATCCACCCAGGCCGAGCCGCAG
AGCGTCGACACCGTGCTGCGTTTCTCGTCCTCGCGCGAGGGGGGGCTTGGCGATGCGCTTCCCGCCGGGACCGTGCGAGT
CTACATGCGCGATGCGCGGGGCCAGCCGCAGTTCATCGGCGAGAACGGCATTGGCCACACGCCCATGGGTTCCAGCCTTG
CGCTGAAGACCGGCGAGGCTTTCGACGTGAAGGTCCAGCCGGTCCTGGAACGGCGCGACCGCATCGACAGCGGCGAATGG
GAACGTACCGCCCGATACCGCGTGACGACCCCGGGCAAGGCGCCGTCGGAAGTGATCGTCGAACAGGAAAAGACCTTCTG
GCGCACGACGATGACCTACAAGGTCACCAATGCGCGCGGCACGCCCGTCACCGTGGAACTGGTCCAGGCCGGCCTCGACA
ACTGGTGGCACGATACTCGCGTGCCCTCGGAAAGCATCAAGGGGGAACAGCGCTCGGCGGACGAGCGGAGCTGGCAGGTT
CCGGTGCCCGCCAATGGCGAGGCGACGCTGACCGTCCAGTTCGACACGCGTTACTGA

Upstream 100 bases:

>100_bases
GCCGCAACCGCCGTTCAGCCTGCGTTGATCTGCCTCTGGTGAAGATCCGTCCGGTCTGGCAGGCTCGGCCGCCGGACCGC
CGGAGGGGGAAAACGAAAAG

Downstream 100 bases:

>100_bases
CCCCGGCCGTGCGCCGCGCGCTCATCCTCGTTGCGATACTGTGGCCGGCCGCCGTGCTGGCGCAGGACGTCGTCACCTCG
TCCGCTCCCGACAGCGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MHKFLFLVAAAIPAAIPATVPVAASAQSPQSAQGDVSLTIYNNDLALVQDVRQMNLALGRTRQEFPDVSAAIRPETVTLN
AGGTGIVEQNFDYDLLTPEKLMDKAVGQTVTLVRTNPATGAETRETATILANNGGTIVRVGDRIEVLNTYGARVVFPTLP
AGLRARPTLSVTLDTTSPGIRPVTLNYLSRGFGWKADYVALFDEAAGRIDVQGWITLSNNSGTTFDKARVLLVAGSVGDG
NQGYDQGYRRPRPAMPGNRPGIESASRESLGDFYVYPIAGRTTVANAQQKQVSFLDVAGASASKAYHFRNGWLSTQAEPQ
SVDTVLRFSSSREGGLGDALPAGTVRVYMRDARGQPQFIGENGIGHTPMGSSLALKTGEAFDVKVQPVLERRDRIDSGEW
ERTARYRVTTPGKAPSEVIVEQEKTFWRTTMTYKVTNARGTPVTVELVQAGLDNWWHDTRVPSESIKGEQRSADERSWQV
PVPANGEATLTVQFDTRY

Sequences:

>Translated_498_residues
MHKFLFLVAAAIPAAIPATVPVAASAQSPQSAQGDVSLTIYNNDLALVQDVRQMNLALGRTRQEFPDVSAAIRPETVTLN
AGGTGIVEQNFDYDLLTPEKLMDKAVGQTVTLVRTNPATGAETRETATILANNGGTIVRVGDRIEVLNTYGARVVFPTLP
AGLRARPTLSVTLDTTSPGIRPVTLNYLSRGFGWKADYVALFDEAAGRIDVQGWITLSNNSGTTFDKARVLLVAGSVGDG
NQGYDQGYRRPRPAMPGNRPGIESASRESLGDFYVYPIAGRTTVANAQQKQVSFLDVAGASASKAYHFRNGWLSTQAEPQ
SVDTVLRFSSSREGGLGDALPAGTVRVYMRDARGQPQFIGENGIGHTPMGSSLALKTGEAFDVKVQPVLERRDRIDSGEW
ERTARYRVTTPGKAPSEVIVEQEKTFWRTTMTYKVTNARGTPVTVELVQAGLDNWWHDTRVPSESIKGEQRSADERSWQV
PVPANGEATLTVQFDTRY
>Mature_498_residues
MHKFLFLVAAAIPAAIPATVPVAASAQSPQSAQGDVSLTIYNNDLALVQDVRQMNLALGRTRQEFPDVSAAIRPETVTLN
AGGTGIVEQNFDYDLLTPEKLMDKAVGQTVTLVRTNPATGAETRETATILANNGGTIVRVGDRIEVLNTYGARVVFPTLP
AGLRARPTLSVTLDTTSPGIRPVTLNYLSRGFGWKADYVALFDEAAGRIDVQGWITLSNNSGTTFDKARVLLVAGSVGDG
NQGYDQGYRRPRPAMPGNRPGIESASRESLGDFYVYPIAGRTTVANAQQKQVSFLDVAGASASKAYHFRNGWLSTQAEPQ
SVDTVLRFSSSREGGLGDALPAGTVRVYMRDARGQPQFIGENGIGHTPMGSSLALKTGEAFDVKVQPVLERRDRIDSGEW
ERTARYRVTTPGKAPSEVIVEQEKTFWRTTMTYKVTNARGTPVTVELVQAGLDNWWHDTRVPSESIKGEQRSADERSWQV
PVPANGEATLTVQFDTRY

Specific function: Unknown

COG id: COG5316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54007; Mature: 54007

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKFLFLVAAAIPAAIPATVPVAASAQSPQSAQGDVSLTIYNNDLALVQDVRQMNLALGR
CCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
TRQEFPDVSAAIRPETVTLNAGGTGIVEQNFDYDLLTPEKLMDKAVGQTVTLVRTNPATG
CHHHCCCCCCEECCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCC
AETRETATILANNGGTIVRVGDRIEVLNTYGARVVFPTLPAGLRARPTLSVTLDTTSPGI
CCCCCEEEEEECCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCCCCC
RPVTLNYLSRGFGWKADYVALFDEAAGRIDVQGWITLSNNSGTTFDKARVLLVAGSVGDG
EEEEHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCC
NQGYDQGYRRPRPAMPGNRPGIESASRESLGDFYVYPIAGRTTVANAQQKQVSFLDVAGA
CCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCEECCCHHHHEEEEEECCC
SASKAYHFRNGWLSTQAEPQSVDTVLRFSSSREGGLGDALPAGTVRVYMRDARGQPQFIG
CCCCEEEEECCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEC
ENGIGHTPMGSSLALKTGEAFDVKVQPVLERRDRIDSGEWERTARYRVTTPGKAPSEVIV
CCCCCCCCCCCCEEEECCCEEEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHE
EQEKTFWRTTMTYKVTNARGTPVTVELVQAGLDNWWHDTRVPSESIKGEQRSADERSWQV
ECCCEEEEEEEEEEEECCCCCCEEHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEC
PVPANGEATLTVQFDTRY
CCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MHKFLFLVAAAIPAAIPATVPVAASAQSPQSAQGDVSLTIYNNDLALVQDVRQMNLALGR
CCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
TRQEFPDVSAAIRPETVTLNAGGTGIVEQNFDYDLLTPEKLMDKAVGQTVTLVRTNPATG
CHHHCCCCCCEECCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCC
AETRETATILANNGGTIVRVGDRIEVLNTYGARVVFPTLPAGLRARPTLSVTLDTTSPGI
CCCCCEEEEEECCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCCCCC
RPVTLNYLSRGFGWKADYVALFDEAAGRIDVQGWITLSNNSGTTFDKARVLLVAGSVGDG
EEEEHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCC
NQGYDQGYRRPRPAMPGNRPGIESASRESLGDFYVYPIAGRTTVANAQQKQVSFLDVAGA
CCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCEECCCHHHHEEEEEECCC
SASKAYHFRNGWLSTQAEPQSVDTVLRFSSSREGGLGDALPAGTVRVYMRDARGQPQFIG
CCCCEEEEECCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEC
ENGIGHTPMGSSLALKTGEAFDVKVQPVLERRDRIDSGEWERTARYRVTTPGKAPSEVIV
CCCCCCCCCCCCEEEECCCEEEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHE
EQEKTFWRTTMTYKVTNARGTPVTVELVQAGLDNWWHDTRVPSESIKGEQRSADERSWQV
ECCCEEEEEEEEEEEECCCCCCEEHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEC
PVPANGEATLTVQFDTRY
CCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA