Click here to switch to the map view.

The map label for this gene is crtK [H]

Identifier: 87200681

GI number: 87200681

Start: 2906274

End: 2906828

Strand: Reverse

Name: crtK [H]

Synonym: Saro_2668

Alternate gene names: 87200681

Gene position: 2906828-2906274 (Counterclockwise)

Preceding gene: 87200682

Following gene: 87200680

Centisome position: 81.62

GC content: 63.96

Gene sequence:

>555_bases
ATGAACTACCTCGCTTCCTCCGGCCAGCTTCGCGCCAGCCTTCTGCGCTGGTCCCTGTTCACCGTCCCCTTGCTGTTGGT
GCTGGGGTTCTTCTCCGGCCAGGCGGCAGGCAGCGGCCCCGGCAATCCCTGGTTCGACGAACTCGTCAAGCCTACGATCT
ATCCGCCGCCGGTCGCCTTTCCGATCGTCTGGTCGACACTCTACGTGCTCATGGGCATTTCGCTGGCGATGATCCTTTCG
GCGCGCGGTGCGGCGGGGCGTGGGTTGGCGGTGGCGGTCTTCGTGGTCCAGCTTGCCCTGAACCTCGCCTGGTCGCCTGT
GTTCTTTGCCATGCACCAGATTCTCGCCGCGTTCTGGATCGCGGTGGCGATGGCGGTCACGATCCTCCTGACATTGGTGC
TTTTCTGGCGGATTCGTCCGGTCGCGGGGATGTTGCTGCTGCCCTATCTCGCGTGGGTGTGCTTTGCGAGCGTCCTGACC
TTCGAGATCGGGCGGCTCAATCCCGGGGCGGATGGCGCTTTCGGTTCTTCGCGCACGGTCCGCGTTTCGATTTGA

Upstream 100 bases:

>100_bases
CCGGTGGGATTGCGGATAGTTTCAGTTCGCATTGCGCAGTTACCTGCAGAGCGCCAATATCGCAGGCGAATCGCGCTTCG
TCGCATTGCAAACGGGTGAC

Downstream 100 bases:

>100_bases
CCCTTGCGGGCGGGCCCGTGCCCGCCCACATAGCGGGTCCGTAACGCCAACAGGACTCTGCCAATGCAAAGCGAAAACCC
GCTGATCGCCGACTTCGTCA

Product: TspO and MBR like proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNYLASSGQLRASLLRWSLFTVPLLLVLGFFSGQAAGSGPGNPWFDELVKPTIYPPPVAFPIVWSTLYVLMGISLAMILS
ARGAAGRGLAVAVFVVQLALNLAWSPVFFAMHQILAAFWIAVAMAVTILLTLVLFWRIRPVAGMLLLPYLAWVCFASVLT
FEIGRLNPGADGAFGSSRTVRVSI

Sequences:

>Translated_184_residues
MNYLASSGQLRASLLRWSLFTVPLLLVLGFFSGQAAGSGPGNPWFDELVKPTIYPPPVAFPIVWSTLYVLMGISLAMILS
ARGAAGRGLAVAVFVVQLALNLAWSPVFFAMHQILAAFWIAVAMAVTILLTLVLFWRIRPVAGMLLLPYLAWVCFASVLT
FEIGRLNPGADGAFGSSRTVRVSI
>Mature_184_residues
MNYLASSGQLRASLLRWSLFTVPLLLVLGFFSGQAAGSGPGNPWFDELVKPTIYPPPVAFPIVWSTLYVLMGISLAMILS
ARGAAGRGLAVAVFVVQLALNLAWSPVFFAMHQILAAFWIAVAMAVTILLTLVLFWRIRPVAGMLLLPYLAWVCFASVLT
FEIGRLNPGADGAFGSSRTVRVSI

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

Organism=Homo sapiens, GI74275350, Length=148, Percent_Identity=33.7837837837838, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19920472, Length=133, Percent_Identity=36.0902255639098, Blast_Score=85, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 19857; Mature: 19857

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLASSGQLRASLLRWSLFTVPLLLVLGFFSGQAAGSGPGNPWFDELVKPTIYPPPVAF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHH
PIVWSTLYVLMGISLAMILSARGAAGRGLAVAVFVVQLALNLAWSPVFFAMHQILAAFWI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AVAMAVTILLTLVLFWRIRPVAGMLLLPYLAWVCFASVLTFEIGRLNPGADGAFGSSRTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
RVSI
EEEC
>Mature Secondary Structure
MNYLASSGQLRASLLRWSLFTVPLLLVLGFFSGQAAGSGPGNPWFDELVKPTIYPPPVAF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHH
PIVWSTLYVLMGISLAMILSARGAAGRGLAVAVFVVQLALNLAWSPVFFAMHQILAAFWI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AVAMAVTILLTLVLFWRIRPVAGMLLLPYLAWVCFASVLTFEIGRLNPGADGAFGSSRTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
RVSI
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2747617 [H]