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The map label for this gene is xcpR [H]

Identifier: 87200665

GI number: 87200665

Start: 2887977

End: 2889494

Strand: Reverse

Name: xcpR [H]

Synonym: Saro_2652

Alternate gene names: 87200665

Gene position: 2889494-2887977 (Counterclockwise)

Preceding gene: 87200666

Following gene: 87200664

Centisome position: 81.13

GC content: 68.31

Gene sequence:

>1518_bases
GTGGAGGCGGGCGAAGACATCGAGGGCATGACCGTTGCGGTCGCGCAGGCCGGGCCTGCGATGCCCTATGCCTTCGCGCG
CGACCGCGGCGTCCTCGTGGAAAGCCTGAACGACACCGAGGTTACGGTGGCCCTGCGCGAGGGCGGCGATCCGCTCGCGT
TGCTCGAAATCAGGCGCGTACACAAACGACACCTAAACGTACACGAAGTGACCACAACCGAGTTCGAGAAGCTCCTCGCC
ACGGCCTATGCGGTCGACGGGGCGGCGGCTGCGGTGGCCGGCGACATGGGCATCGCGGGCGACGCGCTCGACCCTCTCGC
GCTCGGCCTGCCGACCGCAGAGGACCTCCTCGACAGCGCCGATGACGCGCCCGCGATCCGCCTGATCAATGGCCTGATCG
CCGAGAGCTTGCGCCAGGGCGTGTCGGACATCCACATCGAACCTTACGAAACCGCGCTTGTCGTGAGGATGCGGGTCGAT
GGCGTGCTGACCGAGAAGCTGCGCATGCCGCCGCATGTCGCGCCGGTGCTGGTGAGCCGCATCAAGGTCATGGCGCGGCT
CGACATTGCCGAACGGCGCGTGCCGCAGGACGGCCGTATCTCGTTGAGCCTGGGCGGAAAACTGGTCGACGTGCGCGTCT
CGACCCTGCCCAACCGCGCCGGCGAGCGAGTGGTCATGCGCCTGCTCGACAAGGAAAATGCCGGACTGGACCTCGTCCAT
CTCGGCCTCGACCCCAAGTCGGAAGACGTCCTGAGCCGGGCCCTGGCGGAGCCAAACGGCATCGTGCTGGTGACCGGCCC
GACGGGTTCGGGCAAGACGACGACGCTCTATGCGGCGTTGCGCGGCCTCAACGATGGCGCGCGGAATATCCTTACTGTTG
AAGACCCTGTGGAATACGCTGTGGATGGCGTCGGCCAGACGCAGGTCAACGCCAAAGTCGGGCTGACCTTCGCGGCGGGA
TTGCGCGCGATCCTCCGCCAGGACCCGGACGTGGTCATGGTCGGCGAAATCCGCGACCGGGAAACCGCTGAAATCGCGGT
GCAGGCGTCGCTGACCGGCCACCTCGTGCTGTCGACCGTGCATACCAACGACGCGGCCGGCGCGGTCACGCGCATGCGCG
ACATGGGGGTGGAGCCGTTCCTGCTGGCATCGACCCTGCGCGCGGTGATCGCACAGCGGCTGGTGCGCCGGCTCTGCCCG
CATTGCCGCGAGGAGCGTGTCCTCGACGCGGGAATGGCCGAAGTCCTCGGTCTTGAGGCGGGCAGCAAGGTCCGTGCCGC
ACGCGGCTGCGCAGAGTGCGGCCAGACCGGATACCAGGGCCGTATCGGCGTGTTCGAGGCGCTGCGGGTGGACGATGCGA
TCCGCCAGATGATCCACGACAATGCCGACGAGGCGGCCATCGCGCGCCATGCCTTCGCCGATGCGCCGACCCTTGCGGGA
TCCGTGCGCCGCCTTGTCGCCGAAGGAGCGACGAGCCCCGAGGAAGCGGCACGCATCATGCGGCGGGACGGGGCCTGA

Upstream 100 bases:

>100_bases
GCGGTGGTAGCGCCGGGCGATACGGTCGTGCGCCCAAGGGCTGCCGCGACGCCGCTCGAACCCGCCGAACTCCCGCCCAG
CAGCGCGCGGAACTGACATC

Downstream 100 bases:

>100_bases
TGGCACGGTTCGCCTATCTCGCCATCGACCCGAAGGGCGCGGAAAAGCGCGGTGCGATCGAGGCTGCCAGCGAGGCCGCC
GCGCGCGAGAAGCTGGTGGC

Product: type II secretion system protein E

Products: NA

Alternate protein names: Type II traffic warden ATPase [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MEAGEDIEGMTVAVAQAGPAMPYAFARDRGVLVESLNDTEVTVALREGGDPLALLEIRRVHKRHLNVHEVTTTEFEKLLA
TAYAVDGAAAAVAGDMGIAGDALDPLALGLPTAEDLLDSADDAPAIRLINGLIAESLRQGVSDIHIEPYETALVVRMRVD
GVLTEKLRMPPHVAPVLVSRIKVMARLDIAERRVPQDGRISLSLGGKLVDVRVSTLPNRAGERVVMRLLDKENAGLDLVH
LGLDPKSEDVLSRALAEPNGIVLVTGPTGSGKTTTLYAALRGLNDGARNILTVEDPVEYAVDGVGQTQVNAKVGLTFAAG
LRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTVHTNDAAGAVTRMRDMGVEPFLLASTLRAVIAQRLVRRLCP
HCREERVLDAGMAEVLGLEAGSKVRAARGCAECGQTGYQGRIGVFEALRVDDAIRQMIHDNADEAAIARHAFADAPTLAG
SVRRLVAEGATSPEEAARIMRRDGA

Sequences:

>Translated_505_residues
MEAGEDIEGMTVAVAQAGPAMPYAFARDRGVLVESLNDTEVTVALREGGDPLALLEIRRVHKRHLNVHEVTTTEFEKLLA
TAYAVDGAAAAVAGDMGIAGDALDPLALGLPTAEDLLDSADDAPAIRLINGLIAESLRQGVSDIHIEPYETALVVRMRVD
GVLTEKLRMPPHVAPVLVSRIKVMARLDIAERRVPQDGRISLSLGGKLVDVRVSTLPNRAGERVVMRLLDKENAGLDLVH
LGLDPKSEDVLSRALAEPNGIVLVTGPTGSGKTTTLYAALRGLNDGARNILTVEDPVEYAVDGVGQTQVNAKVGLTFAAG
LRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTVHTNDAAGAVTRMRDMGVEPFLLASTLRAVIAQRLVRRLCP
HCREERVLDAGMAEVLGLEAGSKVRAARGCAECGQTGYQGRIGVFEALRVDDAIRQMIHDNADEAAIARHAFADAPTLAG
SVRRLVAEGATSPEEAARIMRRDGA
>Mature_505_residues
MEAGEDIEGMTVAVAQAGPAMPYAFARDRGVLVESLNDTEVTVALREGGDPLALLEIRRVHKRHLNVHEVTTTEFEKLLA
TAYAVDGAAAAVAGDMGIAGDALDPLALGLPTAEDLLDSADDAPAIRLINGLIAESLRQGVSDIHIEPYETALVVRMRVD
GVLTEKLRMPPHVAPVLVSRIKVMARLDIAERRVPQDGRISLSLGGKLVDVRVSTLPNRAGERVVMRLLDKENAGLDLVH
LGLDPKSEDVLSRALAEPNGIVLVTGPTGSGKTTTLYAALRGLNDGARNILTVEDPVEYAVDGVGQTQVNAKVGLTFAAG
LRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTVHTNDAAGAVTRMRDMGVEPFLLASTLRAVIAQRLVRRLCP
HCREERVLDAGMAEVLGLEAGSKVRAARGCAECGQTGYQGRIGVFEALRVDDAIRQMIHDNADEAAIARHAFADAPTLAG
SVRRLVAEGATSPEEAARIMRRDGA

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=449, Percent_Identity=51.4476614699332, Blast_Score=436, Evalue=1e-123,
Organism=Escherichia coli, GI1786296, Length=378, Percent_Identity=46.031746031746, Blast_Score=323, Evalue=1e-89,
Organism=Escherichia coli, GI87082188, Length=273, Percent_Identity=38.8278388278388, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013369
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 53719; Mature: 53719

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAGEDIEGMTVAVAQAGPAMPYAFARDRGVLVESLNDTEVTVALREGGDPLALLEIRRV
CCCCCCCCCCEEEEECCCCCCCCHHHCCCCCEEECCCCCEEEEEEECCCCCCHHHHHHHH
HKRHLNVHEVTTTEFEKLLATAYAVDGAAAAVAGDMGIAGDALDPLALGLPTAEDLLDSA
HHHCCCHHEEHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHCCC
DDAPAIRLINGLIAESLRQGVSDIHIEPYETALVVRMRVDGVLTEKLRMPPHVAPVLVSR
CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHHHH
IKVMARLDIAERRVPQDGRISLSLGGKLVDVRVSTLPNRAGERVVMRLLDKENAGLDLVH
HHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEE
LGLDPKSEDVLSRALAEPNGIVLVTGPTGSGKTTTLYAALRGLNDGARNILTVEDPVEYA
ECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHH
VDGVGQTQVNAKVGLTFAAGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTV
HCCCCCEEECCEECHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEECCCEEEEEEE
HTNDAAGAVTRMRDMGVEPFLLASTLRAVIAQRLVRRLCPHCREERVLDAGMAEVLGLEA
ECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
GSKVRAARGCAECGQTGYQGRIGVFEALRVDDAIRQMIHDNADEAAIARHAFADAPTLAG
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH
SVRRLVAEGATSPEEAARIMRRDGA
HHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEAGEDIEGMTVAVAQAGPAMPYAFARDRGVLVESLNDTEVTVALREGGDPLALLEIRRV
CCCCCCCCCCEEEEECCCCCCCCHHHCCCCCEEECCCCCEEEEEEECCCCCCHHHHHHHH
HKRHLNVHEVTTTEFEKLLATAYAVDGAAAAVAGDMGIAGDALDPLALGLPTAEDLLDSA
HHHCCCHHEEHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHCCC
DDAPAIRLINGLIAESLRQGVSDIHIEPYETALVVRMRVDGVLTEKLRMPPHVAPVLVSR
CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHHHH
IKVMARLDIAERRVPQDGRISLSLGGKLVDVRVSTLPNRAGERVVMRLLDKENAGLDLVH
HHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEE
LGLDPKSEDVLSRALAEPNGIVLVTGPTGSGKTTTLYAALRGLNDGARNILTVEDPVEYA
ECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHH
VDGVGQTQVNAKVGLTFAAGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTV
HCCCCCEEECCEECHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEECCCEEEEEEE
HTNDAAGAVTRMRDMGVEPFLLASTLRAVIAQRLVRRLCPHCREERVLDAGMAEVLGLEA
ECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
GSKVRAARGCAECGQTGYQGRIGVFEALRVDDAIRQMIHDNADEAAIARHAFADAPTLAG
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH
SVRRLVAEGATSPEEAARIMRRDGA
HHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]