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The map label for this gene is xcpS [H]

Identifier: 87200664

GI number: 87200664

Start: 2886748

End: 2887977

Strand: Reverse

Name: xcpS [H]

Synonym: Saro_2651

Alternate gene names: 87200664

Gene position: 2887977-2886748 (Counterclockwise)

Preceding gene: 87200665

Following gene: 87200663

Centisome position: 81.09

GC content: 66.75

Gene sequence:

>1230_bases
ATGGCACGGTTCGCCTATCTCGCCATCGACCCGAAGGGCGCGGAAAAGCGCGGTGCGATCGAGGCTGCCAGCGAGGCCGC
CGCGCGCGAGAAGCTGGTGGCACGGCAATGGTTCGTCGTCAGCTTGAGCCCGGATGCGGCCGCTTCGGCGCGACGTGCCG
CCACTTCCACCAGCGGTCTCGCGCTGTTCGCTTCAAGGCTCAACGCCAAGCAACTGGCGCTTTTCACGCGGCAGCTTTCG
TCGCTGATGGTTGTCAGCCCGCTTGAGGAAACGCTTCGCACGATCGCGCGGCAGACCGAAAAGCCCAAGGCGCAGGCGAT
CCTCACGAACGTCCATGCCGGTATCGTCGAGGGCCTGCCGCTTGCCGAGGCCATGCGACGCGAAGAGCCGAGCTTTCCGC
CGATCTACCGTGCGATGATCGCGGCGGGCGAGAATTCGGGAAGCCTCCCTGCCATTGCCGACCGTCTGGCCGACATGCTG
GAGCGGCAGGCGCAGGTGCGAGGCAAGATCATTGCCGCGCTGGCCTATCCCATCGTGCTGTCGCTCGTCGCCATCGCGGT
GGTGACCGGGCTGATGATCTCCGTCGTGCCGCGCGTGGTCGAGCAGTTCGACAATGCCAGCCGACAGTTGCCCATGCTCA
CCCGCGTGGTGATCGGCATCTCTCAGTTCCTGAGCGCCTGGTGGTGGGCCGTGCTGGCGGCGCTGGCGCTGGCGGTTGCC
GGCTTCGTGCGGGCGCTGCGCAATCCGGCTTTCCGCCTGCGTTTCGACGCCGGGCTGCTGCGACTGCCATTCATCGGCAA
GCTGATCCGCGACGTCCATGCCGCCTCGCTCGCACGCACGCTGGCCACGATGATCGAGGCACGGCTGCCGCTGGTAGATG
GACTTCGGCTGGCGACCCGGACGGTCTCGAACGCGGTCCAAGCCCGGGCGCTTGGCCAGATCGGGGAAAAGGTGCGGGCG
GGCGGATCACTTTCGACCGCATTGCGCGAGGCAGGGACTTTCCCGCCGCTGCTGGTCTACCTTGCCGCGAGCGGCGAGGC
GGCAGGGCAGCTCGGCACGATGCTTGAGCGCGCCGCCGATTATCTCGAACGCGAGTTCGAGGCGTTCACCGCTGCGGCGA
TGGCGCTTCTCGAACCTGCGATCATCGTTGTCATGGGCACGCTCGTCGCGCTCATCATCCTCGCCATCCTGCTGCCGATC
CTGCAGCTTCAGAACCTGACCGGACTGTGA

Upstream 100 bases:

>100_bases
CCGATGCGCCGACCCTTGCGGGATCCGTGCGCCGCCTTGTCGCCGAAGGAGCGACGAGCCCCGAGGAAGCGGCACGCATC
ATGCGGCGGGACGGGGCCTG

Downstream 100 bases:

>100_bases
AAATGACCGACCAAACCGTGATTGACGCCCCTGAGACCGAGGAAGAGCGCCGCCGCAACGGCTTCAGCCTCGTCGAACTG
ATGGTCGTCATCTTCATCAT

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MARFAYLAIDPKGAEKRGAIEAASEAAAREKLVARQWFVVSLSPDAAASARRAATSTSGLALFASRLNAKQLALFTRQLS
SLMVVSPLEETLRTIARQTEKPKAQAILTNVHAGIVEGLPLAEAMRREEPSFPPIYRAMIAAGENSGSLPAIADRLADML
ERQAQVRGKIIAALAYPIVLSLVAIAVVTGLMISVVPRVVEQFDNASRQLPMLTRVVIGISQFLSAWWWAVLAALALAVA
GFVRALRNPAFRLRFDAGLLRLPFIGKLIRDVHAASLARTLATMIEARLPLVDGLRLATRTVSNAVQARALGQIGEKVRA
GGSLSTALREAGTFPPLLVYLAASGEAAGQLGTMLERAADYLEREFEAFTAAAMALLEPAIIVVMGTLVALIILAILLPI
LQLQNLTGL

Sequences:

>Translated_409_residues
MARFAYLAIDPKGAEKRGAIEAASEAAAREKLVARQWFVVSLSPDAAASARRAATSTSGLALFASRLNAKQLALFTRQLS
SLMVVSPLEETLRTIARQTEKPKAQAILTNVHAGIVEGLPLAEAMRREEPSFPPIYRAMIAAGENSGSLPAIADRLADML
ERQAQVRGKIIAALAYPIVLSLVAIAVVTGLMISVVPRVVEQFDNASRQLPMLTRVVIGISQFLSAWWWAVLAALALAVA
GFVRALRNPAFRLRFDAGLLRLPFIGKLIRDVHAASLARTLATMIEARLPLVDGLRLATRTVSNAVQARALGQIGEKVRA
GGSLSTALREAGTFPPLLVYLAASGEAAGQLGTMLERAADYLEREFEAFTAAAMALLEPAIIVVMGTLVALIILAILLPI
LQLQNLTGL
>Mature_408_residues
ARFAYLAIDPKGAEKRGAIEAASEAAAREKLVARQWFVVSLSPDAAASARRAATSTSGLALFASRLNAKQLALFTRQLSS
LMVVSPLEETLRTIARQTEKPKAQAILTNVHAGIVEGLPLAEAMRREEPSFPPIYRAMIAAGENSGSLPAIADRLADMLE
RQAQVRGKIIAALAYPIVLSLVAIAVVTGLMISVVPRVVEQFDNASRQLPMLTRVVIGISQFLSAWWWAVLAALALAVAG
FVRALRNPAFRLRFDAGLLRLPFIGKLIRDVHAASLARTLATMIEARLPLVDGLRLATRTVSNAVQARALGQIGEKVRAG
GSLSTALREAGTFPPLLVYLAASGEAAGQLGTMLERAADYLEREFEAFTAAAMALLEPAIIVVMGTLVALIILAILLPIL
QLQNLTGL

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=405, Percent_Identity=35.3086419753086, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1786295, Length=329, Percent_Identity=29.7872340425532, Blast_Score=128, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43680; Mature: 43549

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFAYLAIDPKGAEKRGAIEAASEAAAREKLVARQWFVVSLSPDAAASARRAATSTSGL
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCCHH
ALFASRLNAKQLALFTRQLSSLMVVSPLEETLRTIARQTEKPKAQAILTNVHAGIVEGLP
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
LAEAMRREEPSFPPIYRAMIAAGENSGSLPAIADRLADMLERQAQVRGKIIAALAYPIVL
HHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVAIAVVTGLMISVVPRVVEQFDNASRQLPMLTRVVIGISQFLSAWWWAVLAALALAVA
HHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVRALRNPAFRLRFDAGLLRLPFIGKLIRDVHAASLARTLATMIEARLPLVDGLRLATR
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TVSNAVQARALGQIGEKVRAGGSLSTALREAGTFPPLLVYLAASGEAAGQLGTMLERAAD
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
YLEREFEAFTAAAMALLEPAIIVVMGTLVALIILAILLPILQLQNLTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARFAYLAIDPKGAEKRGAIEAASEAAAREKLVARQWFVVSLSPDAAASARRAATSTSGL
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCCHH
ALFASRLNAKQLALFTRQLSSLMVVSPLEETLRTIARQTEKPKAQAILTNVHAGIVEGLP
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
LAEAMRREEPSFPPIYRAMIAAGENSGSLPAIADRLADMLERQAQVRGKIIAALAYPIVL
HHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVAIAVVTGLMISVVPRVVEQFDNASRQLPMLTRVVIGISQFLSAWWWAVLAALALAVA
HHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVRALRNPAFRLRFDAGLLRLPFIGKLIRDVHAASLARTLATMIEARLPLVDGLRLATR
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TVSNAVQARALGQIGEKVRAGGSLSTALREAGTFPPLLVYLAASGEAAGQLGTMLERAAD
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
YLEREFEAFTAAAMALLEPAIIVVMGTLVALIILAILLPILQLQNLTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]