| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200656
Identifier: 87200656
GI number: 87200656
Start: 2879513
End: 2880529
Strand: Reverse
Name: 87200656
Synonym: Saro_2643
Alternate gene names: NA
Gene position: 2880529-2879513 (Counterclockwise)
Preceding gene: 87200657
Following gene: 87200655
Centisome position: 80.88
GC content: 68.83
Gene sequence:
>1017_bases ATGTGGTCTTCGCCACTCGCGCCGACGGTTCATGCCGCCGCGCGTGAGGACATTGCAGCGATCCTTGCGCAGCGAGCCTC GACTGAACGCGGTCGCGCATCGGACCATGAGGCCGTGTCGGCATCGTCGGGATTTGCCTTTGCGGGCCAGGATGGCGCGG AAGCCCGACCGCGCACAGCCGATGGCGATGGGCTGACTGACAGGCAGCGGGCTGAGCCTCCAGGGTGGTACCTGCACGAG CGAGGTCTTTTGTGGCGGGTCAATCCCGGCATTGCGCCGCCGCCCGATCTCCGCCCGCAAGCCGAGGCTGCAGAGGGCGA GTATCAGGACCCGGCGGTGTTCAAGGACGATCCGCGGTGGACGTTCGACAGGTGGCTGCTCATGCGGGCGGGGAGCGGCG ATGCGGCACAAGCGCCGGGGGCGGCGTCGTATGGCGCCAGTCAGGCGGGAGCGATCGCGCGGTTCCGGCTCGGTCGTGGA GCGCCGCGCGAAAGCTATGTCTATCTGCGGACCTCGCTCGCGATCAATGCGCCGGCAAAGGACAAGGAAATCGCCATCGG CTTCGGGATGCGACCGATCGCGCGGGTGCCCGTGCGCGTCCTGGCGGAAGCAAGGCTCCAGGATTCCAGCCAGAGCGCTG TCCGAATCCGCCCTGTGGCGACGGTGATCAGCGAGCTTCCGTGGCAGCGCCTGCCCTTCGGGTTTCGCGGCGAAGCCTAT GGCCAGGCGGGCTATGCCGGCGGGCGCGACGCCACGGCGTTCTTCGATGTCCAGGCCGTTGCCGACCGGCAGTTGGATGC CCTTCTCCCCAAACGCATGGACTTGCGGATTGGGGCAGGGGTCTGGGCCGGGGGTCAGAAGGGGGCGGTCCGCGTCGACG CGGGGCCGCGCGTGTCGTTCCGGATGAACCTTGGCGAGGAAGTGCCCAGCCGCATCGCGCTGGATTGGCGGTTCCGCCTG ACGGGGAATGCGCGCCCCGGTTCGGGGCCGGCGCTGACGATAGCCTCCTCGTTCTGA
Upstream 100 bases:
>100_bases TGGTCGGCAACTGATGGTGCGCGCCGCGTCAGGCCGGCGCGGACAACCGGTACTGTTCCTGGCGCTGATCATCGCATCCT GGGCAACGGCGAGGATATCG
Downstream 100 bases:
>100_bases GCCTGCGCGCTTTTTGGTGCAAATCCGCCGCGCGGGGTTGCTGGCAAGTGATGTGCAGCCTAGCGTCGGACCGGCAATGG ACGTCTATCTTCCCATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MWSSPLAPTVHAAAREDIAAILAQRASTERGRASDHEAVSASSGFAFAGQDGAEARPRTADGDGLTDRQRAEPPGWYLHE RGLLWRVNPGIAPPPDLRPQAEAAEGEYQDPAVFKDDPRWTFDRWLLMRAGSGDAAQAPGAASYGASQAGAIARFRLGRG APRESYVYLRTSLAINAPAKDKEIAIGFGMRPIARVPVRVLAEARLQDSSQSAVRIRPVATVISELPWQRLPFGFRGEAY GQAGYAGGRDATAFFDVQAVADRQLDALLPKRMDLRIGAGVWAGGQKGAVRVDAGPRVSFRMNLGEEVPSRIALDWRFRL TGNARPGSGPALTIASSF
Sequences:
>Translated_338_residues MWSSPLAPTVHAAAREDIAAILAQRASTERGRASDHEAVSASSGFAFAGQDGAEARPRTADGDGLTDRQRAEPPGWYLHE RGLLWRVNPGIAPPPDLRPQAEAAEGEYQDPAVFKDDPRWTFDRWLLMRAGSGDAAQAPGAASYGASQAGAIARFRLGRG APRESYVYLRTSLAINAPAKDKEIAIGFGMRPIARVPVRVLAEARLQDSSQSAVRIRPVATVISELPWQRLPFGFRGEAY GQAGYAGGRDATAFFDVQAVADRQLDALLPKRMDLRIGAGVWAGGQKGAVRVDAGPRVSFRMNLGEEVPSRIALDWRFRL TGNARPGSGPALTIASSF >Mature_338_residues MWSSPLAPTVHAAAREDIAAILAQRASTERGRASDHEAVSASSGFAFAGQDGAEARPRTADGDGLTDRQRAEPPGWYLHE RGLLWRVNPGIAPPPDLRPQAEAAEGEYQDPAVFKDDPRWTFDRWLLMRAGSGDAAQAPGAASYGASQAGAIARFRLGRG APRESYVYLRTSLAINAPAKDKEIAIGFGMRPIARVPVRVLAEARLQDSSQSAVRIRPVATVISELPWQRLPFGFRGEAY GQAGYAGGRDATAFFDVQAVADRQLDALLPKRMDLRIGAGVWAGGQKGAVRVDAGPRVSFRMNLGEEVPSRIALDWRFRL TGNARPGSGPALTIASSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36298; Mature: 36298
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSSPLAPTVHAAAREDIAAILAQRASTERGRASDHEAVSASSGFAFAGQDGAEARPRTA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCC DGDGLTDRQRAEPPGWYLHERGLLWRVNPGIAPPPDLRPQAEAAEGEYQDPAVFKDDPRW CCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TFDRWLLMRAGSGDAAQAPGAASYGASQAGAIARFRLGRGAPRESYVYLRTSLAINAPAK EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCC DKEIAIGFGMRPIARVPVRVLAEARLQDSSQSAVRIRPVATVISELPWQRLPFGFRGEAY CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCHHHCCCCCCCCCC GQAGYAGGRDATAFFDVQAVADRQLDALLPKRMDLRIGAGVWAGGQKGAVRVDAGPRVSF CCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEECCCEECCCCCCEEEECCCCCEEE RMNLGEEVPSRIALDWRFRLTGNARPGSGPALTIASSF EECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECC >Mature Secondary Structure MWSSPLAPTVHAAAREDIAAILAQRASTERGRASDHEAVSASSGFAFAGQDGAEARPRTA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCC DGDGLTDRQRAEPPGWYLHERGLLWRVNPGIAPPPDLRPQAEAAEGEYQDPAVFKDDPRW CCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TFDRWLLMRAGSGDAAQAPGAASYGASQAGAIARFRLGRGAPRESYVYLRTSLAINAPAK EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCC DKEIAIGFGMRPIARVPVRVLAEARLQDSSQSAVRIRPVATVISELPWQRLPFGFRGEAY CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCHHHCCCCCCCCCC GQAGYAGGRDATAFFDVQAVADRQLDALLPKRMDLRIGAGVWAGGQKGAVRVDAGPRVSF CCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEECCCEECCCCCCEEEECCCCCEEE RMNLGEEVPSRIALDWRFRLTGNARPGSGPALTIASSF EECCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA