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The map label for this gene is nfrB [H]

Identifier: 87200657

GI number: 87200657

Start: 2880616

End: 2882082

Strand: Reverse

Name: nfrB [H]

Synonym: Saro_2644

Alternate gene names: 87200657

Gene position: 2882082-2880616 (Counterclockwise)

Preceding gene: 87200660

Following gene: 87200656

Centisome position: 80.92

GC content: 66.46

Gene sequence:

>1467_bases
TTGAGGACATGGCTTGCCGATAGTGCGTATCAGTGGCTCGCCGTTCTCGAGCATGAGCTTCTGTTGTTCGCGGCGGTGTG
GTTCGCGATCGGGGCGGCTGACGAATTGGTCATGGACGGGATCTGGCTCTGGCAGCGCCTGACCGGCGCGGGCCCGACCG
GGCAACTGGCCGGCAACGGTCGCGACAAGCTTTCCTCCATGGCAGCGGTTTTCGTGCCAGCCTGGCGGGAGTCCGCCGTG
ATCGGGCCCATGGTCGCGCATTGCCTTGCGGTCTGGCCGCAGGAAGATTTGCGGATCTACGTGGGATGCTACCGCAACGA
CCAGGAAACGCTGAATGCGCTGACGATCGTCAGCGAGGACCCGAGGGTCCGGGTGGTCGTCCATGACCGTGACGGACCGA
CCACCAAGGCAGACTGCCTCAACCGTCTCTACCTCGCCATGCGCCAGGACGAACGGCGCAGCGGACAGCGGATCGGCTTC
ATTGTGCTGCATGACGCGGAGGACATGGTCCATCCCGCAGCCCTCGCACTGATGGATCGGGCGCTTGATACGGTCGATTT
CGTACAACTGCCGGTGCGTCCCGAGCCGCAGGCATCCTCGCCGTGGGTCGCCGGACACTACTGCGACGAGTTCGCCGAGG
CGCACGCGAGAGACATGGTGGTGCGCGATCATATCGGGGCCGGGTTGCCTTCGGCCGGCGTCGGATGTGCGTTCTCGCGC
GCCGCGATCGAGCGCATCGTGGCGGTGCGCGGAGGCGCCTTGCCGTTTGCGGCGGACTGCCTGACGGAAGACTACGAGGC
GGGCATGCTGGTCGCCGAGACAGGTGGCCGTTCGCGCTTCATCAGGGTGCGCGATGCGCGCGGGGAGCTTGTCGCGACCC
GGGAGTTCTTTCCCGATGGCCTTGCAGCATCGGTGCGGCAGAAGACGCGCTGGGTGCACGGGATCGCATTCCAGGGTTGG
GATCGGCTGGGATGGAACCGGTCCGCCGGAGACCTGTGGATGCGCCTGAGGGACAGGCGGGGGCCGCTCGTGGCGCTGGT
TCTGCTTGCGGCATACCTGGCCTTGCCGCTGTGGCCCATCGTGAGGTTCGGCGAGATGGCGGGCTTCGTCGTGCCGGTGC
CACCCGGCCCAGTGCTGAAGGGTCTGCTTGCCTTCAACCTTTGCAGCCTGATCTGGCGGCTAGTCGTCCGGGCGCTGTTC
ACCGGCAGCGAGTACGGGTGGATCGAAGGTGTACGGTCGGTTTTCCGGTTTCCCGTGGGCAACATCATCGCGATAATGGC
CGCGCGCCGCGCTGCGGTGGCTTATGTCCGGGTGCTTTTCGGGGGAGCGCTTACCTGGGACCACACACTACACTGCGCAC
ACCCGGTGCAGGCCGGGGTCGGCCTTGCCAGCCACGCTAGTTCGACCCAACGCCCACGGCGGCCTGCAAGCAGCGGTCTT
GTCCCGGCGGCGCTGGTCGGCAACTGA

Upstream 100 bases:

>100_bases
CGCGCCAAATGGGCATACCTTGGCTCTTGTGCCCACTGGAGGGGGGCGGGTCAAACCGCTGCCGCCAGCGTCGGGATTCG
CAAGGGGGCGGGGCGGGCTT

Downstream 100 bases:

>100_bases
TGGTGCGCGCCGCGTCAGGCCGGCGCGGACAACCGGTACTGTTCCTGGCGCTGATCATCGCATCCTGGGCAACGGCGAGG
ATATCGATGTGGTCTTCGCC

Product: bacteriophage N4 adsorption protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MRTWLADSAYQWLAVLEHELLLFAAVWFAIGAADELVMDGIWLWQRLTGAGPTGQLAGNGRDKLSSMAAVFVPAWRESAV
IGPMVAHCLAVWPQEDLRIYVGCYRNDQETLNALTIVSEDPRVRVVVHDRDGPTTKADCLNRLYLAMRQDERRSGQRIGF
IVLHDAEDMVHPAALALMDRALDTVDFVQLPVRPEPQASSPWVAGHYCDEFAEAHARDMVVRDHIGAGLPSAGVGCAFSR
AAIERIVAVRGGALPFAADCLTEDYEAGMLVAETGGRSRFIRVRDARGELVATREFFPDGLAASVRQKTRWVHGIAFQGW
DRLGWNRSAGDLWMRLRDRRGPLVALVLLAAYLALPLWPIVRFGEMAGFVVPVPPGPVLKGLLAFNLCSLIWRLVVRALF
TGSEYGWIEGVRSVFRFPVGNIIAIMAARRAAVAYVRVLFGGALTWDHTLHCAHPVQAGVGLASHASSTQRPRRPASSGL
VPAALVGN

Sequences:

>Translated_488_residues
MRTWLADSAYQWLAVLEHELLLFAAVWFAIGAADELVMDGIWLWQRLTGAGPTGQLAGNGRDKLSSMAAVFVPAWRESAV
IGPMVAHCLAVWPQEDLRIYVGCYRNDQETLNALTIVSEDPRVRVVVHDRDGPTTKADCLNRLYLAMRQDERRSGQRIGF
IVLHDAEDMVHPAALALMDRALDTVDFVQLPVRPEPQASSPWVAGHYCDEFAEAHARDMVVRDHIGAGLPSAGVGCAFSR
AAIERIVAVRGGALPFAADCLTEDYEAGMLVAETGGRSRFIRVRDARGELVATREFFPDGLAASVRQKTRWVHGIAFQGW
DRLGWNRSAGDLWMRLRDRRGPLVALVLLAAYLALPLWPIVRFGEMAGFVVPVPPGPVLKGLLAFNLCSLIWRLVVRALF
TGSEYGWIEGVRSVFRFPVGNIIAIMAARRAAVAYVRVLFGGALTWDHTLHCAHPVQAGVGLASHASSTQRPRRPASSGL
VPAALVGN
>Mature_488_residues
MRTWLADSAYQWLAVLEHELLLFAAVWFAIGAADELVMDGIWLWQRLTGAGPTGQLAGNGRDKLSSMAAVFVPAWRESAV
IGPMVAHCLAVWPQEDLRIYVGCYRNDQETLNALTIVSEDPRVRVVVHDRDGPTTKADCLNRLYLAMRQDERRSGQRIGF
IVLHDAEDMVHPAALALMDRALDTVDFVQLPVRPEPQASSPWVAGHYCDEFAEAHARDMVVRDHIGAGLPSAGVGCAFSR
AAIERIVAVRGGALPFAADCLTEDYEAGMLVAETGGRSRFIRVRDARGELVATREFFPDGLAASVRQKTRWVHGIAFQGW
DRLGWNRSAGDLWMRLRDRRGPLVALVLLAAYLALPLWPIVRFGEMAGFVVPVPPGPVLKGLLAFNLCSLIWRLVVRALF
TGSEYGWIEGVRSVFRFPVGNIIAIMAARRAAVAYVRVLFGGALTWDHTLHCAHPVQAGVGLASHASSTQRPRRPASSGL
VPAALVGN

Specific function: Required for bacteriophage N4 adsorption. May be a component of the phage receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786781, Length=410, Percent_Identity=33.6585365853659, Blast_Score=218, Evalue=6e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007831 [H]

Pfam domain/function: PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 53505; Mature: 53505

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTWLADSAYQWLAVLEHELLLFAAVWFAIGAADELVMDGIWLWQRLTGAGPTGQLAGNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RDKLSSMAAVFVPAWRESAVIGPMVAHCLAVWPQEDLRIYVGCYRNDQETLNALTIVSED
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHEEEEEECC
PRVRVVVHDRDGPTTKADCLNRLYLAMRQDERRSGQRIGFIVLHDAEDMVHPAALALMDR
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHH
ALDTVDFVQLPVRPEPQASSPWVAGHYCDEFAEAHARDMVVRDHIGAGLPSAGVGCAFSR
HHCHHHHEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AAIERIVAVRGGALPFAADCLTEDYEAGMLVAETGGRSRFIRVRDARGELVATREFFPDG
HHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEHHHCCCH
LAASVRQKTRWVHGIAFQGWDRLGWNRSAGDLWMRLRDRRGPLVALVLLAAYLALPLWPI
HHHHHHHHHHHHHEEEECCHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VRFGEMAGFVVPVPPGPVLKGLLAFNLCSLIWRLVVRALFTGSEYGWIEGVRSVFRFPVG
HHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
NIIAIMAARRAAVAYVRVLFGGALTWDHTLHCAHPVQAGVGLASHASSTQRPRRPASSGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCHHCCCCCCCCCCCCCCCC
VPAALVGN
CCCHHCCC
>Mature Secondary Structure
MRTWLADSAYQWLAVLEHELLLFAAVWFAIGAADELVMDGIWLWQRLTGAGPTGQLAGNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RDKLSSMAAVFVPAWRESAVIGPMVAHCLAVWPQEDLRIYVGCYRNDQETLNALTIVSED
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHEEEEEECC
PRVRVVVHDRDGPTTKADCLNRLYLAMRQDERRSGQRIGFIVLHDAEDMVHPAALALMDR
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHH
ALDTVDFVQLPVRPEPQASSPWVAGHYCDEFAEAHARDMVVRDHIGAGLPSAGVGCAFSR
HHCHHHHEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AAIERIVAVRGGALPFAADCLTEDYEAGMLVAETGGRSRFIRVRDARGELVATREFFPDG
HHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEHHHCCCH
LAASVRQKTRWVHGIAFQGWDRLGWNRSAGDLWMRLRDRRGPLVALVLLAAYLALPLWPI
HHHHHHHHHHHHHEEEECCHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VRFGEMAGFVVPVPPGPVLKGLLAFNLCSLIWRLVVRALFTGSEYGWIEGVRSVFRFPVG
HHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
NIIAIMAARRAAVAYVRVLFGGALTWDHTLHCAHPVQAGVGLASHASSTQRPRRPASSGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCHHCCCCCCCCCCCCCCCC
VPAALVGN
CCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]