Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200637

Identifier: 87200637

GI number: 87200637

Start: 2839239

End: 2840651

Strand: Reverse

Name: 87200637

Synonym: Saro_2624

Alternate gene names: NA

Gene position: 2840651-2839239 (Counterclockwise)

Preceding gene: 87200640

Following gene: 87200636

Centisome position: 79.76

GC content: 66.53

Gene sequence:

>1413_bases
ATGCTCGAAACACGCTGGCGCCGCTGTGCGTTCATGCTTGCCGCATCCGCGCTGACCGTGCCTGCCGTGGCTCACGCCGC
CGGTTCGACCAGTCGTGAGGCCGAACTCGAAGCGCGCCTGCTGAGGCTGGAGAGCGAGATGGAGGCCATGAAGGCCGACC
TCGCCCAGGCCCGCGCCGACAAGGCCGATGCCGGCATCCACGCTGCGGAGGTGGCCGAGGCCGCGTCGGAGAAGGCCGAC
GCCGCCACCGCCAAGGTGGCCGCGCTCGAGGCCAAGCCCCAGCCCGAAGGCTTCCGGGTCGGCAGTACGACCGTGAAACT
GGGTGGATGGATCAAGCTCGTCGCCACCAGCAGCCGTTTCAGCGACGGCGAGGTCGCCAACAATGCGTTCGGGCGCGATT
TCTGGCTGCCGCAGCAGATTCCGGTGGGCGGCGGACATGCCGTGCGCGAGCAGGATTTCAGCGCTCGCCAGTCGCGCTTC
TGGCTGAATCTCGATACCACGGTCGCCGGGCACAGCCTCAAGGGCTACGTCGAAACCGATTTCGAGACGGCGCCGGGCAC
GCAAGGCACGCAGCGCACCACCAACGGCTACAACCTCGCGCTGCGCCGTGCCTATATCCAGGTCGACAAGTGGACCTTCG
GCCAGGACTGGTCGACCTTCCAGTACACCGGGGCCCTGCCCGAAAGCACCGACTACGTTGGCACCACCGAGGGCACCGTC
TTCGTGCGCCAGCCCGTGATCCGCTACTCGACCAAGGTGGGGGACACGATGACGCTGCACGTTTCGGTCGAGAACCCGGA
AACCGCCACCGCAACCGCCGGCTCGGCCACGCTTGTCGAGAACGGCGACGATCGCATCCCAGACTTCGCCGCGCGTCTCG
TCTGGAACGGCAAGGCCGGAGAGCTCTCGCTGGCGGGGCTGGCGCGTGAACTGCGCATAGAAAACAATGGCGTTGCCGAC
AGCCGCTTTGGCTGGGGCGTCAGTGCGGCGGGCAAGCTGTTCCTGGATGACGACAAGGTCAGCGACCTGCGCTTCATGGC
GACATACGGGCAGGGCGCCAGCCGCTACATTGGCGCGAACTTCGCTCCGGATGCGGTTTTCGTCGGTGCCACCGGCAAAC
TCGAGAACGTCACCGTCGCCTCGGCCATGGTCGCGGGCCGCTTCGGCATCGCGCCGGGCCTGCGCGCCAACCTGATGGGG
AGCTGGCAACGGGTCCACTACGCCGATGCGCTGACCTCCGCGATGGTCGGCACATACAACAAGCAGGCGTGGAGCCTTGC
CGGCAACCTGTTCTGGTCGCCGATAAAGAATGTCGACCTCGGGATCGAGGTCCGGCACGGTGAGCGCAAGCTCGTCAACG
GTGCGAGCGGTTCGCTCGATCGCATCGAGTTCGCCGCGAAGTACGGTTTCTAA

Upstream 100 bases:

>100_bases
TAGTCGTAGATATAAGACCATCCTCTCTCTGGTTGCCAAGCCCCGGCCGGGGAAAACTGCCGGCAGGATGTCGCGAAATA
GCGATGCCGGGAGAGGGAAA

Downstream 100 bases:

>100_bases
GAGCCCACAATAATAGGGGAAGAGGATGTCCAACCTTGAGATAGCGGATGATTTTTCGGCTTTGCCGAAACATCATCAGG
CCACGCACAACGAGAAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MLETRWRRCAFMLAASALTVPAVAHAAGSTSREAELEARLLRLESEMEAMKADLAQARADKADAGIHAAEVAEAASEKAD
AATAKVAALEAKPQPEGFRVGSTTVKLGGWIKLVATSSRFSDGEVANNAFGRDFWLPQQIPVGGGHAVREQDFSARQSRF
WLNLDTTVAGHSLKGYVETDFETAPGTQGTQRTTNGYNLALRRAYIQVDKWTFGQDWSTFQYTGALPESTDYVGTTEGTV
FVRQPVIRYSTKVGDTMTLHVSVENPETATATAGSATLVENGDDRIPDFAARLVWNGKAGELSLAGLARELRIENNGVAD
SRFGWGVSAAGKLFLDDDKVSDLRFMATYGQGASRYIGANFAPDAVFVGATGKLENVTVASAMVAGRFGIAPGLRANLMG
SWQRVHYADALTSAMVGTYNKQAWSLAGNLFWSPIKNVDLGIEVRHGERKLVNGASGSLDRIEFAAKYGF

Sequences:

>Translated_470_residues
MLETRWRRCAFMLAASALTVPAVAHAAGSTSREAELEARLLRLESEMEAMKADLAQARADKADAGIHAAEVAEAASEKAD
AATAKVAALEAKPQPEGFRVGSTTVKLGGWIKLVATSSRFSDGEVANNAFGRDFWLPQQIPVGGGHAVREQDFSARQSRF
WLNLDTTVAGHSLKGYVETDFETAPGTQGTQRTTNGYNLALRRAYIQVDKWTFGQDWSTFQYTGALPESTDYVGTTEGTV
FVRQPVIRYSTKVGDTMTLHVSVENPETATATAGSATLVENGDDRIPDFAARLVWNGKAGELSLAGLARELRIENNGVAD
SRFGWGVSAAGKLFLDDDKVSDLRFMATYGQGASRYIGANFAPDAVFVGATGKLENVTVASAMVAGRFGIAPGLRANLMG
SWQRVHYADALTSAMVGTYNKQAWSLAGNLFWSPIKNVDLGIEVRHGERKLVNGASGSLDRIEFAAKYGF
>Mature_470_residues
MLETRWRRCAFMLAASALTVPAVAHAAGSTSREAELEARLLRLESEMEAMKADLAQARADKADAGIHAAEVAEAASEKAD
AATAKVAALEAKPQPEGFRVGSTTVKLGGWIKLVATSSRFSDGEVANNAFGRDFWLPQQIPVGGGHAVREQDFSARQSRF
WLNLDTTVAGHSLKGYVETDFETAPGTQGTQRTTNGYNLALRRAYIQVDKWTFGQDWSTFQYTGALPESTDYVGTTEGTV
FVRQPVIRYSTKVGDTMTLHVSVENPETATATAGSATLVENGDDRIPDFAARLVWNGKAGELSLAGLARELRIENNGVAD
SRFGWGVSAAGKLFLDDDKVSDLRFMATYGQGASRYIGANFAPDAVFVGATGKLENVTVASAMVAGRFGIAPGLRANLMG
SWQRVHYADALTSAMVGTYNKQAWSLAGNLFWSPIKNVDLGIEVRHGERKLVNGASGSLDRIEFAAKYGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50539; Mature: 50539

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLETRWRRCAFMLAASALTVPAVAHAAGSTSREAELEARLLRLESEMEAMKADLAQARAD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KADAGIHAAEVAEAASEKADAATAKVAALEAKPQPEGFRVGSTTVKLGGWIKLVATSSRF
CCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEECCEEEEECCEEEEEEECCCC
SDGEVANNAFGRDFWLPQQIPVGGGHAVREQDFSARQSRFWLNLDTTVAGHSLKGYVETD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCEECCCCEECEEEEC
FETAPGTQGTQRTTNGYNLALRRAYIQVDKWTFGQDWSTFQYTGALPESTDYVGTTEGTV
CCCCCCCCCCCCCCCCCEEEEEEEEEEEECEECCCCCCCEEEECCCCCCCCCCCCCCCEE
FVRQPVIRYSTKVGDTMTLHVSVENPETATATAGSATLVENGDDRIPDFAARLVWNGKAG
EEECCHHHHHCCCCCEEEEEEEECCCCCCEECCCCEEEEECCCCCCCHHHHHEEECCCCC
ELSLAGLARELRIENNGVADSRFGWGVSAAGKLFLDDDKVSDLRFMATYGQGASRYIGAN
CEEHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCEEECCC
FAPDAVFVGATGKLENVTVASAMVAGRFGIAPGLRANLMGSWQRVHYADALTSAMVGTYN
CCCCEEEEECCCCCCCEEHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCC
KQAWSLAGNLFWSPIKNVDLGIEVRHGERKLVNGASGSLDRIEFAAKYGF
CHHHHHHCCCEECCCCCCCEEEEEECCCEEEECCCCCCHHHHHEEECCCC
>Mature Secondary Structure
MLETRWRRCAFMLAASALTVPAVAHAAGSTSREAELEARLLRLESEMEAMKADLAQARAD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KADAGIHAAEVAEAASEKADAATAKVAALEAKPQPEGFRVGSTTVKLGGWIKLVATSSRF
CCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEECCEEEEECCEEEEEEECCCC
SDGEVANNAFGRDFWLPQQIPVGGGHAVREQDFSARQSRFWLNLDTTVAGHSLKGYVETD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCEECCCCEECEEEEC
FETAPGTQGTQRTTNGYNLALRRAYIQVDKWTFGQDWSTFQYTGALPESTDYVGTTEGTV
CCCCCCCCCCCCCCCCCEEEEEEEEEEEECEECCCCCCCEEEECCCCCCCCCCCCCCCEE
FVRQPVIRYSTKVGDTMTLHVSVENPETATATAGSATLVENGDDRIPDFAARLVWNGKAG
EEECCHHHHHCCCCCEEEEEEEECCCCCCEECCCCEEEEECCCCCCCHHHHHEEECCCCC
ELSLAGLARELRIENNGVADSRFGWGVSAAGKLFLDDDKVSDLRFMATYGQGASRYIGAN
CEEHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCEEECCC
FAPDAVFVGATGKLENVTVASAMVAGRFGIAPGLRANLMGSWQRVHYADALTSAMVGTYN
CCCCEEEEECCCCCCCEEHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCC
KQAWSLAGNLFWSPIKNVDLGIEVRHGERKLVNGASGSLDRIEFAAKYGF
CHHHHHHCCCEECCCCCCCEEEEEECCCEEEECCCCCCHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA