Click here to switch to the map view.

The map label for this gene is yvdB [H]

Identifier: 87200629

GI number: 87200629

Start: 2829738

End: 2831276

Strand: Reverse

Name: yvdB [H]

Synonym: Saro_2616

Alternate gene names: 87200629

Gene position: 2831276-2829738 (Counterclockwise)

Preceding gene: 87200630

Following gene: 87200628

Centisome position: 79.49

GC content: 67.71

Gene sequence:

>1539_bases
ATGAGCACCGCCGCCACGGCCGCGCAAGCCGAGGGGAGCGGACCGTTCCGCTTCCTCGCACGCGATTTCACCGCGTCCAT
CGTCGTGTTCCTGGTGGCAATGCCCCTGTGCATGGGCATCGCGATCGCCTCGGGCGTGCCGCCTGAAAAGGGTCTCGTCA
CCGGCATCATAGGCGGCATCGTGGTCGGCGTTCTGGCCGGCTCGCCCCTCCAGGTAAGCGGCCCGGCCGCGGGCCTTGCG
GTCATCGTATTCGAATTCGTCCGCGACAACGGCCTGTCCGCGCTGGGCCCGGTCCTGGTGCTGGCCGGTGCGCTCCAGTT
CGTGGCGGGTGTGGCGCGCCTTGGCGGCGTGTTCCGCGCGATCTCGCCGGCGGTCGTCCACGGCATGCTCGCCGGCATTG
GCGCGCTGATCGTCATCGGCCAGTTCCACATCCTGTTCGACGCCAAGCCGATGTCGAGCGGGATCGAAAACCTCGCGATG
ATGCCAGCCCGGGTGCTCGGCCTGACCCCGTTCGACCTGCGCTCGACCGAACTGGCGCTGATGCTCGGTCTCCTGACCAT
CGGCACGATGATCGCCTGGGACAAGCTCAAGCCGTCGAAGGTTTCGCTCGTACCAGGGGCGCTTCTGGGCGTTCTGGCCG
CGACTGCCGTCGCGTGGGGCGCCGGGCTCGACGTGGCGCGCATCACCGTGCCGGATTCGATCGCCGCGGCCTTCGCACTT
CCCGATGGCGGTTTCCTCGGCCCGCTGACCCAGCCGTCGCTGATCGTCTCGGCCATTGCCATCGCCTTCATCGCAAGCGC
CGAGACGCTTCTCTCCGCCGCTGCTGTCGACCGCATGCACGATGGCGTGCGTACCGACTACAACAAGGAGCTGCGGGCAC
AGGGTATCGGCAACCTGCTTTGCGGCGTCGTCAACGCGCTGCCCATGACCGGGGTCATCGTGCGCAGTTCGGCGAACGTG
CAGGCGGGCGCGAAGACGCGCTGGTCCGCTGTTGCGCACGGCGCATGGATCCTCGGCTTTGTCGCGCTGCTGCCCTGGCT
GCTGCGGGAAGTGCCCATGGCTGCACTCGGCGGCGTGCTGGTCGTGACCGGCTGGAAGCTGGTCAGCCTCAAGCACGTCA
GCCACCTGTTCCGCGCCCACGGCGTGATGCCGGCGCTGATCTGGGTTGCGACGTTCCTGCTCGTCGTGACGACCGACTTG
CTTACCGGCGTGCTTGTCGGCCTCGCGCTTTCGGCACTGGAACTTCTGCCGCATGTGCGAAACCTGCGCTTCCGCGTCGG
GGAAAAGCCGGCGGGCGAAGCGGTGCGGCTGGAACTGGAAGGCGCCGCGACCTTCCTCGGCCTTACCCGGCTGACCACTG
CTCTTGAGCAGATCCCGCCGAGCAAGTCTGTACACGTCGACATGGGCGGTGTGCACGCGATCGATCACACGACCGCGGAA
ATGCTCAACGAATGGCTGTCCCGTCGTCGTTCGCGTGGGGACGAGGTGACCGTTACCGGCCCCGCGCCGATCCTGAAGTC
CCTGGCCCACGCGGCCTGA

Upstream 100 bases:

>100_bases
ACACCGGCCAGTTCGTGCCCCTGCGCGAGGATCGTTCGCTTCCTGTCGCCCTGCCGGCACAGCCGCGCGCCGCGTCCGAA
CCCCTGGTCGAGGCTGCGGA

Downstream 100 bases:

>100_bases
TCAACGCCCGGACCAGTCCCACCCGGGCAATCGCCGGGCAGGCCGTGACCCCCTCTTGGTGCCTGCCCGGCGATTTTTGC
ATTGCAGCAACAGACACACT

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSTAATAAQAEGSGPFRFLARDFTASIVVFLVAMPLCMGIAIASGVPPEKGLVTGIIGGIVVGVLAGSPLQVSGPAAGLA
VIVFEFVRDNGLSALGPVLVLAGALQFVAGVARLGGVFRAISPAVVHGMLAGIGALIVIGQFHILFDAKPMSSGIENLAM
MPARVLGLTPFDLRSTELALMLGLLTIGTMIAWDKLKPSKVSLVPGALLGVLAATAVAWGAGLDVARITVPDSIAAAFAL
PDGGFLGPLTQPSLIVSAIAIAFIASAETLLSAAAVDRMHDGVRTDYNKELRAQGIGNLLCGVVNALPMTGVIVRSSANV
QAGAKTRWSAVAHGAWILGFVALLPWLLREVPMAALGGVLVVTGWKLVSLKHVSHLFRAHGVMPALIWVATFLLVVTTDL
LTGVLVGLALSALELLPHVRNLRFRVGEKPAGEAVRLELEGAATFLGLTRLTTALEQIPPSKSVHVDMGGVHAIDHTTAE
MLNEWLSRRRSRGDEVTVTGPAPILKSLAHAA

Sequences:

>Translated_512_residues
MSTAATAAQAEGSGPFRFLARDFTASIVVFLVAMPLCMGIAIASGVPPEKGLVTGIIGGIVVGVLAGSPLQVSGPAAGLA
VIVFEFVRDNGLSALGPVLVLAGALQFVAGVARLGGVFRAISPAVVHGMLAGIGALIVIGQFHILFDAKPMSSGIENLAM
MPARVLGLTPFDLRSTELALMLGLLTIGTMIAWDKLKPSKVSLVPGALLGVLAATAVAWGAGLDVARITVPDSIAAAFAL
PDGGFLGPLTQPSLIVSAIAIAFIASAETLLSAAAVDRMHDGVRTDYNKELRAQGIGNLLCGVVNALPMTGVIVRSSANV
QAGAKTRWSAVAHGAWILGFVALLPWLLREVPMAALGGVLVVTGWKLVSLKHVSHLFRAHGVMPALIWVATFLLVVTTDL
LTGVLVGLALSALELLPHVRNLRFRVGEKPAGEAVRLELEGAATFLGLTRLTTALEQIPPSKSVHVDMGGVHAIDHTTAE
MLNEWLSRRRSRGDEVTVTGPAPILKSLAHAA
>Mature_511_residues
STAATAAQAEGSGPFRFLARDFTASIVVFLVAMPLCMGIAIASGVPPEKGLVTGIIGGIVVGVLAGSPLQVSGPAAGLAV
IVFEFVRDNGLSALGPVLVLAGALQFVAGVARLGGVFRAISPAVVHGMLAGIGALIVIGQFHILFDAKPMSSGIENLAMM
PARVLGLTPFDLRSTELALMLGLLTIGTMIAWDKLKPSKVSLVPGALLGVLAATAVAWGAGLDVARITVPDSIAAAFALP
DGGFLGPLTQPSLIVSAIAIAFIASAETLLSAAAVDRMHDGVRTDYNKELRAQGIGNLLCGVVNALPMTGVIVRSSANVQ
AGAKTRWSAVAHGAWILGFVALLPWLLREVPMAALGGVLVVTGWKLVSLKHVSHLFRAHGVMPALIWVATFLLVVTTDLL
TGVLVGLALSALELLPHVRNLRFRVGEKPAGEAVRLELEGAATFLGLTRLTTALEQIPPSKSVHVDMGGVHAIDHTTAEM
LNEWLSRRRSRGDEVTVTGPAPILKSLAHAA

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=557, Percent_Identity=24.5960502692998, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI262206075, Length=557, Percent_Identity=24.5960502692998, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI262206069, Length=557, Percent_Identity=24.5960502692998, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI262206063, Length=557, Percent_Identity=24.5960502692998, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI94721255, Length=457, Percent_Identity=23.6323851203501, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI94721253, Length=457, Percent_Identity=23.6323851203501, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI94721257, Length=457, Percent_Identity=23.6323851203501, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI94721259, Length=457, Percent_Identity=23.6323851203501, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI87081859, Length=432, Percent_Identity=29.6296296296296, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 52889; Mature: 52758

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAATAAQAEGSGPFRFLARDFTASIVVFLVAMPLCMGIAIASGVPPEKGLVTGIIGGI
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VVGVLAGSPLQVSGPAAGLAVIVFEFVRDNGLSALGPVLVLAGALQFVAGVARLGGVFRA
HHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISPAVVHGMLAGIGALIVIGQFHILFDAKPMSSGIENLAMMPARVLGLTPFDLRSTELAL
HHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
MLGLLTIGTMIAWDKLKPSKVSLVPGALLGVLAATAVAWGAGLDVARITVPDSIAAAFAL
HHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHEEC
PDGGFLGPLTQPSLIVSAIAIAFIASAETLLSAAAVDRMHDGVRTDYNKELRAQGIGNLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
CGVVNALPMTGVIVRSSANVQAGAKTRWSAVAHGAWILGFVALLPWLLREVPMAALGGVL
HHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEE
VVTGWKLVSLKHVSHLFRAHGVMPALIWVATFLLVVTTDLLTGVLVGLALSALELLPHVR
EEECHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLRFRVGEKPAGEAVRLELEGAATFLGLTRLTTALEQIPPSKSVHVDMGGVHAIDHTTAE
HHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEHHHHHHHH
MLNEWLSRRRSRGDEVTVTGPAPILKSLAHAA
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
STAATAAQAEGSGPFRFLARDFTASIVVFLVAMPLCMGIAIASGVPPEKGLVTGIIGGI
CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VVGVLAGSPLQVSGPAAGLAVIVFEFVRDNGLSALGPVLVLAGALQFVAGVARLGGVFRA
HHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISPAVVHGMLAGIGALIVIGQFHILFDAKPMSSGIENLAMMPARVLGLTPFDLRSTELAL
HHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
MLGLLTIGTMIAWDKLKPSKVSLVPGALLGVLAATAVAWGAGLDVARITVPDSIAAAFAL
HHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHEEC
PDGGFLGPLTQPSLIVSAIAIAFIASAETLLSAAAVDRMHDGVRTDYNKELRAQGIGNLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
CGVVNALPMTGVIVRSSANVQAGAKTRWSAVAHGAWILGFVALLPWLLREVPMAALGGVL
HHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEE
VVTGWKLVSLKHVSHLFRAHGVMPALIWVATFLLVVTTDLLTGVLVGLALSALELLPHVR
EEECHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLRFRVGEKPAGEAVRLELEGAATFLGLTRLTTALEQIPPSKSVHVDMGGVHAIDHTTAE
HHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEHHHHHHHH
MLNEWLSRRRSRGDEVTVTGPAPILKSLAHAA
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]