| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200604
Identifier: 87200604
GI number: 87200604
Start: 2797271
End: 2799415
Strand: Reverse
Name: 87200604
Synonym: Saro_2591
Alternate gene names: NA
Gene position: 2799415-2797271 (Counterclockwise)
Preceding gene: 87200607
Following gene: 87200602
Centisome position: 78.6
GC content: 65.31
Gene sequence:
>2145_bases ATGGGGTTATGTAATAGTGTATCTTTCCATCTGCCTTGCCCCGTGCGAAGGGGGAGATTGCGTTTGAAACCAATTGTGCA GGAAAGGCTGTCGATAATGGCTGACCTTCGTATTCCGGCATCGCTTGCCGCATTGGCAGGGCTCCTGCTTGCCGGACCGG CCCGCGCCGACGAGGGCATGTGGACTTTCGATGCCTTTCCGTCCGCGAAGATGCAGGCAGATTACGGCTGGGCGCCGGAT GGCAGGTGGCTGGACCGGGTGCAGGCGGCGGCGGTGCGGCTGACCGGTGGTTGTTCCGCCAGTTTCGTATCGCCGGACGG GCTGATCCTGACCAATCATCACTGCGTGGTCGAGTGCGCGCAGGACAATTCGACGGACGAGAACGACTTGCTGAAGCTCG GCTTCGTGCCTGTCCGGCGCGAGGAGGAGCTGAAATGCCCCGGTCAGCAGGCCGAAGTGGTGACCGCGATCGGGGACGTG ACCGCGCGCGTCAGGGCGGCGATCGGCACGGCCACAGGTGAAGCGCTGGTCAAGGCGCGCGATGCGGAGGCGGCCCGGAT CGAGAAGGAGGGATGCAGGGACGCCGCGACCACCCGGTGCGAGGTCGTCACGCTGTTCGGCGGCGGGCAATACAAGCTCT ATACCTACCGCAAGTATGCCGACGTGCGGCTGGCATGGGCGCCGCAGTTCCAGGCGGCGTTCTTCGGCGGCGATCCGGAC AACTTCAATTATCCGCGCTATGCGCTCGATGCCGCGTTCCTTCGCGCCTACGAGAACGGTCGGCCGGTGAAGGTGAAATC CTTCCTGAAGTGGAACCCGCGCGCGCCGCAAGTGGGCGAGGCGACGTTCGTCGTGGGCAATCCCGGGTCGACGCAACGGC TGTTTACCTCGGAACAGATCGCCTTCCAGCGCGAAGTGGGCCTGCCGTTGACCACGACGATCCTGTCGGAGCTGCGCGGT CGGCTGATCGGCGCAATGGAACGCAGCCCCCAGGCGAAGCGCGAAGGCGCGGACGAACTGTTCGGGATCGAGAACAGCCT GAAGGTCTATGTCGGGCGGCAGAAGGCGCTGAACGACCCGGCGTTCCTGAAGATGCTGGCCGAGGCCGAGGCGGATTTGA AAGCGAAGTCGCTGGGCAAGCCGGGTATCGGAGATCCCTGGGCCGACACGGCAAGGGCGGTGAAAGCCTATCGCGATCTC TATGTGCCCTGGCGGTTCATCGTGCCGTGGGGTTCGCTGATGGGCTATGCGCAGACCATCGTTCAGGGCACGGCCGAGCG CGAGAAGCCCGATGCCGATCGCCTGCCGGGCTATACGGAAAGCAACCTGGAGCTGACCACCAAGACGCTGCTGGACGAAG CGCCGGTCTATCCCTGGCTGGAACAGGTCGAGATGGCCTGGAGCCTTTCAAAGGCGCGCGAATACCTTGGCGCGGACGAT GCTGACACCCGGCTGCTGCTGGGCCGGGAATCGCCTGAGGCCCTGGCCGAGCGACTTGTGGGTGGAACCACGCTGGCGGA CCCGGCGGTGCGCCGCGCGCTGTGGGAAGGCGGGCGCAAGGCGGTGGAGGCATCGAGCGATCCGATGATCGTCTATGCCC GCGCCATCGACGCGCGCGAGCGGGAGCTCAAGAAACTGGTCGACGAACGCTACGCCGGTCCGCTGGCCGAGGCCGGGGCG ACGCTCGCCGATGCGCGGTTCCTCGCTTATGGCGACAGGATCTACCCGGATGCGACGTTCACCCTGCGCATCAGCTATGG CAAGGTGCAGGGCTGGAAGGAGCGCGGCATTGATGTGGCGGCGGTGACCACGCTGGGCGGCGCGTTCGAGCGGGCGACGG GGGCCGAACCGTTCGATCTGGCCAGCGCCTTTGCCGCGAACGAGGCACGGATCGACAAGGCGGTGCCGTTCGATTTCGTC ACGACCAACGACATCATCGGCGGCAATTCCGGATCACCGGTAATCGACAGGTCCGGGACGGTGATCGGTGCGGCGTTTGA CGGGAACATCCATTCCATCGGCGGCAACTATGGCTACCAGGGGGACGTCAACCGGACGGTGGTCGTCAGCGCGGCGGCGG TGCAGCACGCGCTGGAAGTGATCTATCCGGCGCCGGCACTGGTGAAGGAATTGCGGGGCAAGTGA
Upstream 100 bases:
>100_bases ACAAGGCGACCCTTGCGGATCAGCCGTTTGAGCATCTGGTCGAGGAGCCACATATGACGAGACTATGCGAAGCGAAACCT GTCGCAAGGATTAATCGTCG
Downstream 100 bases:
>100_bases AAAGGGGCGGGGCCTTGCGGCTCCGCCCCGTGTTTCGTGGCTTATCGAGCGACCGATCAGCGGCAGCGGCCGCCACTGCG TTCGATCTCGCGACCGAGGA
Product: dipeptidyl-peptidase 7
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 714; Mature: 713
Protein sequence:
>714_residues MGLCNSVSFHLPCPVRRGRLRLKPIVQERLSIMADLRIPASLAALAGLLLAGPARADEGMWTFDAFPSAKMQADYGWAPD GRWLDRVQAAAVRLTGGCSASFVSPDGLILTNHHCVVECAQDNSTDENDLLKLGFVPVRREEELKCPGQQAEVVTAIGDV TARVRAAIGTATGEALVKARDAEAARIEKEGCRDAATTRCEVVTLFGGGQYKLYTYRKYADVRLAWAPQFQAAFFGGDPD NFNYPRYALDAAFLRAYENGRPVKVKSFLKWNPRAPQVGEATFVVGNPGSTQRLFTSEQIAFQREVGLPLTTTILSELRG RLIGAMERSPQAKREGADELFGIENSLKVYVGRQKALNDPAFLKMLAEAEADLKAKSLGKPGIGDPWADTARAVKAYRDL YVPWRFIVPWGSLMGYAQTIVQGTAEREKPDADRLPGYTESNLELTTKTLLDEAPVYPWLEQVEMAWSLSKAREYLGADD ADTRLLLGRESPEALAERLVGGTTLADPAVRRALWEGGRKAVEASSDPMIVYARAIDARERELKKLVDERYAGPLAEAGA TLADARFLAYGDRIYPDATFTLRISYGKVQGWKERGIDVAAVTTLGGAFERATGAEPFDLASAFAANEARIDKAVPFDFV TTNDIIGGNSGSPVIDRSGTVIGAAFDGNIHSIGGNYGYQGDVNRTVVVSAAAVQHALEVIYPAPALVKELRGK
Sequences:
>Translated_714_residues MGLCNSVSFHLPCPVRRGRLRLKPIVQERLSIMADLRIPASLAALAGLLLAGPARADEGMWTFDAFPSAKMQADYGWAPD GRWLDRVQAAAVRLTGGCSASFVSPDGLILTNHHCVVECAQDNSTDENDLLKLGFVPVRREEELKCPGQQAEVVTAIGDV TARVRAAIGTATGEALVKARDAEAARIEKEGCRDAATTRCEVVTLFGGGQYKLYTYRKYADVRLAWAPQFQAAFFGGDPD NFNYPRYALDAAFLRAYENGRPVKVKSFLKWNPRAPQVGEATFVVGNPGSTQRLFTSEQIAFQREVGLPLTTTILSELRG RLIGAMERSPQAKREGADELFGIENSLKVYVGRQKALNDPAFLKMLAEAEADLKAKSLGKPGIGDPWADTARAVKAYRDL YVPWRFIVPWGSLMGYAQTIVQGTAEREKPDADRLPGYTESNLELTTKTLLDEAPVYPWLEQVEMAWSLSKAREYLGADD ADTRLLLGRESPEALAERLVGGTTLADPAVRRALWEGGRKAVEASSDPMIVYARAIDARERELKKLVDERYAGPLAEAGA TLADARFLAYGDRIYPDATFTLRISYGKVQGWKERGIDVAAVTTLGGAFERATGAEPFDLASAFAANEARIDKAVPFDFV TTNDIIGGNSGSPVIDRSGTVIGAAFDGNIHSIGGNYGYQGDVNRTVVVSAAAVQHALEVIYPAPALVKELRGK >Mature_713_residues GLCNSVSFHLPCPVRRGRLRLKPIVQERLSIMADLRIPASLAALAGLLLAGPARADEGMWTFDAFPSAKMQADYGWAPDG RWLDRVQAAAVRLTGGCSASFVSPDGLILTNHHCVVECAQDNSTDENDLLKLGFVPVRREEELKCPGQQAEVVTAIGDVT ARVRAAIGTATGEALVKARDAEAARIEKEGCRDAATTRCEVVTLFGGGQYKLYTYRKYADVRLAWAPQFQAAFFGGDPDN FNYPRYALDAAFLRAYENGRPVKVKSFLKWNPRAPQVGEATFVVGNPGSTQRLFTSEQIAFQREVGLPLTTTILSELRGR LIGAMERSPQAKREGADELFGIENSLKVYVGRQKALNDPAFLKMLAEAEADLKAKSLGKPGIGDPWADTARAVKAYRDLY VPWRFIVPWGSLMGYAQTIVQGTAEREKPDADRLPGYTESNLELTTKTLLDEAPVYPWLEQVEMAWSLSKAREYLGADDA DTRLLLGRESPEALAERLVGGTTLADPAVRRALWEGGRKAVEASSDPMIVYARAIDARERELKKLVDERYAGPLAEAGAT LADARFLAYGDRIYPDATFTLRISYGKVQGWKERGIDVAAVTTLGGAFERATGAEPFDLASAFAANEARIDKAVPFDFVT TNDIIGGNSGSPVIDRSGTVIGAAFDGNIHSIGGNYGYQGDVNRTVVVSAAAVQHALEVIYPAPALVKELRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77590; Mature: 77459
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLCNSVSFHLPCPVRRGRLRLKPIVQERLSIMADLRIPASLAALAGLLLAGPARADEGM CCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC WTFDAFPSAKMQADYGWAPDGRWLDRVQAAAVRLTGGCSASFVSPDGLILTNHHCVVECA EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCEECCCCEEEECCCEEEEEC QDNSTDENDLLKLGFVPVRREEELKCPGQQAEVVTAIGDVTARVRAAIGTATGEALVKAR CCCCCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEC DAEAARIEKEGCRDAATTRCEVVTLFGGGQYKLYTYRKYADVRLAWAPQFQAAFFGGDPD CCHHHHHHHHCCCHHCCCEEEEEEEECCCEEEEEEEEEECCEEEEECCCEEEEEECCCCC NFNYPRYALDAAFLRAYENGRPVKVKSFLKWNPRAPQVGEATFVVGNPGSTQRLFTSEQI CCCCCHHHHHHHHHHHHCCCCCEEEEHEEECCCCCCCCCCEEEEEECCCCCCEEECHHHH AFQREVGLPLTTTILSELRGRLIGAMERSPQAKREGADELFGIENSLKVYVGRQKALNDP HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHCCCCCEEEEEEHHHHCCCH AFLKMLAEAEADLKAKSLGKPGIGDPWADTARAVKAYRDLYVPWRFIVPWGSLMGYAQTI HHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH VQGTAEREKPDADRLPGYTESNLELTTKTLLDEAPVYPWLEQVEMAWSLSKAREYLGADD HHCCHHCCCCCHHHCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC ADTRLLLGRESPEALAERLVGGTTLADPAVRRALWEGGRKAVEASSDPMIVYARAIDARE CCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCEEEEEECCCHHH RELKKLVDERYAGPLAEAGATLADARFLAYGDRIYPDATFTLRISYGKVQGWKERGIDVA HHHHHHHHHHCCCCHHHHCCHHHHCHHEEECCEECCCCEEEEEEEECCCCCHHHCCCEEE AVTTLGGAFERATGAEPFDLASAFAANEARIDKAVPFDFVTTNDIIGGNSGSPVIDRSGT EEEHHCCHHHHCCCCCCHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCCCEECCCC VIGAAFDGNIHSIGGNYGYQGDVNRTVVVSAAAVQHALEVIYPAPALVKELRGK EEEEEECCCEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure GLCNSVSFHLPCPVRRGRLRLKPIVQERLSIMADLRIPASLAALAGLLLAGPARADEGM CCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC WTFDAFPSAKMQADYGWAPDGRWLDRVQAAAVRLTGGCSASFVSPDGLILTNHHCVVECA EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCEECCCCEEEECCCEEEEEC QDNSTDENDLLKLGFVPVRREEELKCPGQQAEVVTAIGDVTARVRAAIGTATGEALVKAR CCCCCCCCCEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEC DAEAARIEKEGCRDAATTRCEVVTLFGGGQYKLYTYRKYADVRLAWAPQFQAAFFGGDPD CCHHHHHHHHCCCHHCCCEEEEEEEECCCEEEEEEEEEECCEEEEECCCEEEEEECCCCC NFNYPRYALDAAFLRAYENGRPVKVKSFLKWNPRAPQVGEATFVVGNPGSTQRLFTSEQI CCCCCHHHHHHHHHHHHCCCCCEEEEHEEECCCCCCCCCCEEEEEECCCCCCEEECHHHH AFQREVGLPLTTTILSELRGRLIGAMERSPQAKREGADELFGIENSLKVYVGRQKALNDP HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHCCCCCEEEEEEHHHHCCCH AFLKMLAEAEADLKAKSLGKPGIGDPWADTARAVKAYRDLYVPWRFIVPWGSLMGYAQTI HHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH VQGTAEREKPDADRLPGYTESNLELTTKTLLDEAPVYPWLEQVEMAWSLSKAREYLGADD HHCCHHCCCCCHHHCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC ADTRLLLGRESPEALAERLVGGTTLADPAVRRALWEGGRKAVEASSDPMIVYARAIDARE CCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCEEEEEECCCHHH RELKKLVDERYAGPLAEAGATLADARFLAYGDRIYPDATFTLRISYGKVQGWKERGIDVA HHHHHHHHHHCCCCHHHHCCHHHHCHHEEECCEECCCCEEEEEEEECCCCCHHHCCCEEE AVTTLGGAFERATGAEPFDLASAFAANEARIDKAVPFDFVTTNDIIGGNSGSPVIDRSGT EEEHHCCHHHHCCCCCCHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCCCEECCCC VIGAAFDGNIHSIGGNYGYQGDVNRTVVVSAAAVQHALEVIYPAPALVKELRGK EEEEEECCCEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA