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The map label for this gene is 87200607

Identifier: 87200607

GI number: 87200607

Start: 2802353

End: 2803405

Strand: Reverse

Name: 87200607

Synonym: Saro_2594

Alternate gene names: NA

Gene position: 2803405-2802353 (Counterclockwise)

Preceding gene: 87200610

Following gene: 87200604

Centisome position: 78.71

GC content: 68.19

Gene sequence:

>1053_bases
ATGATGGACAGCAAAGCTCTTTCCCGGCCTCGCGGCAAGTCCCGTCTGGTCCCCCGTCTGGTCCACGCGGACGACAGCCT
GCCCGGCGTGACCCGCCGTCGCAGCGGCAGGGGCTGGGCCTATTTCGATGCCGAGGGGCGGCGCATCACCGACCGCGACG
AGATCGACCGGCTGAACGCGATCGCGCTGCCGCCAGCCTATCGCGACGCCTGGTTCTGCCCGGCGCCCAACGGCCATATC
CTGGCGACTGGCATCGATGCCAAGGGGCGCAAGCAGTACCGTTATCACCCCGATTTCCGTGCCGAGCGCGAGGGCGAGAA
GTTCGACCGTTGCGCCGCATTCGGCCGCCGTTTGCCGCTGGTGAGGGCGCGGGTCGGCGAAGAGCTGGCCTCGCGCCAGC
TCAGCCGCGAGCGCTGCATCGCCAGCATCGTGCGCCTGCTCGATACCGGGGCGATCCGCATCGGCAACGAGGCTTATGTC
CGGGAGAACAGGAGCTTCGGCGCGACGACGCTGAGAATGCGCCACGTGCAAGTGCAGGGGCAGGTCCTGCGCCTGCGCTT
TCGCGCCAAGTCCGGCAAGGAGCGCGAGATGCGGCTGACCGACCGCAGCCTGGTGCGTTTCGTGCGCAAGATGCAGGACC
TGCCGGGACAGAACCTGTTCCAGTACGTCAACGAGGATGGCGATCCGTGTCCGGTCGGTTCGGCCGAGGTCAACGAATGG
CTGCGCGAGGTAATGGGCGAAGACTTCACCGCCAAGCACTTCCGCACATGGCGGGCGAGCGTGCTGGCATTTGCGCTGCT
GGCGGGGGCGCAGGGGCGGGTGCCGCTGAAGGACCTGCTGGCGCACGTTTCCGACCACCTCGGCAATACCCCGGCCATCG
CGCGCAAGAGCTATGTCCACCCCGCAGTCATCGCGCTTGTCGAGCGGCAGGAGGAATGGCGGCGCACCTTGCGCCTGCCG
CGCGCGACGCGCTGGCTTTCACGCCATGAACGCGGGCTGATCGAGCTTCTGGAGGAAGCGCCGGCGGCGGCTGAACTGCT
GTCGGCGGGGTGA

Upstream 100 bases:

>100_bases
TCTGAGGACATCGCCTGCTCCTTGGGGATATTGTTAGTGTTGCACACTATATTGAAGCGTTGGGCACGGAACCGCAAGGG
CTTCCGGTCCGTTCGCGTGG

Downstream 100 bases:

>100_bases
CGTCGGTGCCTCAGGGTAGCGTGCGCCAGGCGAGATTGGCGAATTCGCACAGCAGTGGGCGGGTGTCGCGGGGATCGACG
ATGTCTTCCACGCCGAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MMDSKALSRPRGKSRLVPRLVHADDSLPGVTRRRSGRGWAYFDAEGRRITDRDEIDRLNAIALPPAYRDAWFCPAPNGHI
LATGIDAKGRKQYRYHPDFRAEREGEKFDRCAAFGRRLPLVRARVGEELASRQLSRERCIASIVRLLDTGAIRIGNEAYV
RENRSFGATTLRMRHVQVQGQVLRLRFRAKSGKEREMRLTDRSLVRFVRKMQDLPGQNLFQYVNEDGDPCPVGSAEVNEW
LREVMGEDFTAKHFRTWRASVLAFALLAGAQGRVPLKDLLAHVSDHLGNTPAIARKSYVHPAVIALVERQEEWRRTLRLP
RATRWLSRHERGLIELLEEAPAAAELLSAG

Sequences:

>Translated_350_residues
MMDSKALSRPRGKSRLVPRLVHADDSLPGVTRRRSGRGWAYFDAEGRRITDRDEIDRLNAIALPPAYRDAWFCPAPNGHI
LATGIDAKGRKQYRYHPDFRAEREGEKFDRCAAFGRRLPLVRARVGEELASRQLSRERCIASIVRLLDTGAIRIGNEAYV
RENRSFGATTLRMRHVQVQGQVLRLRFRAKSGKEREMRLTDRSLVRFVRKMQDLPGQNLFQYVNEDGDPCPVGSAEVNEW
LREVMGEDFTAKHFRTWRASVLAFALLAGAQGRVPLKDLLAHVSDHLGNTPAIARKSYVHPAVIALVERQEEWRRTLRLP
RATRWLSRHERGLIELLEEAPAAAELLSAG
>Mature_350_residues
MMDSKALSRPRGKSRLVPRLVHADDSLPGVTRRRSGRGWAYFDAEGRRITDRDEIDRLNAIALPPAYRDAWFCPAPNGHI
LATGIDAKGRKQYRYHPDFRAEREGEKFDRCAAFGRRLPLVRARVGEELASRQLSRERCIASIVRLLDTGAIRIGNEAYV
RENRSFGATTLRMRHVQVQGQVLRLRFRAKSGKEREMRLTDRSLVRFVRKMQDLPGQNLFQYVNEDGDPCPVGSAEVNEW
LREVMGEDFTAKHFRTWRASVLAFALLAGAQGRVPLKDLLAHVSDHLGNTPAIARKSYVHPAVIALVERQEEWRRTLRLP
RATRWLSRHERGLIELLEEAPAAAELLSAG

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39887; Mature: 39887

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDSKALSRPRGKSRLVPRLVHADDSLPGVTRRRSGRGWAYFDAEGRRITDRDEIDRLNA
CCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCCCCCCCHHHHHHCCE
IALPPAYRDAWFCPAPNGHILATGIDAKGRKQYRYHPDFRAEREGEKFDRCAAFGRRLPL
EECCCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH
VRARVGEELASRQLSRERCIASIVRLLDTGAIRIGNEAYVRENRSFGATTLRMRHVQVQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCCCCHHHHHHHHHHCC
QVLRLRFRAKSGKEREMRLTDRSLVRFVRKMQDLPGQNLFQYVNEDGDPCPVGSAEVNEW
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHH
LREVMGEDFTAKHFRTWRASVLAFALLAGAQGRVPLKDLLAHVSDHLGNTPAIARKSYVH
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCC
PAVIALVERQEEWRRTLRLPRATRWLSRHERGLIELLEEAPAAAELLSAG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MMDSKALSRPRGKSRLVPRLVHADDSLPGVTRRRSGRGWAYFDAEGRRITDRDEIDRLNA
CCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCCCCCCCHHHHHHCCE
IALPPAYRDAWFCPAPNGHILATGIDAKGRKQYRYHPDFRAEREGEKFDRCAAFGRRLPL
EECCCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH
VRARVGEELASRQLSRERCIASIVRLLDTGAIRIGNEAYVRENRSFGATTLRMRHVQVQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCCCCHHHHHHHHHHCC
QVLRLRFRAKSGKEREMRLTDRSLVRFVRKMQDLPGQNLFQYVNEDGDPCPVGSAEVNEW
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHH
LREVMGEDFTAKHFRTWRASVLAFALLAGAQGRVPLKDLLAHVSDHLGNTPAIARKSYVH
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCC
PAVIALVERQEEWRRTLRLPRATRWLSRHERGLIELLEEAPAAAELLSAG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA