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The map label for this gene is ompW [C]

Identifier: 87200592

GI number: 87200592

Start: 2783100

End: 2783786

Strand: Direct

Name: ompW [C]

Synonym: Saro_2579

Alternate gene names: 87200592

Gene position: 2783100-2783786 (Clockwise)

Preceding gene: 87200579

Following gene: 87200593

Centisome position: 78.14

GC content: 63.32

Gene sequence:

>687_bases
ATGAAGAAGCTGCTTACCGCCGCACTCCCCGTCATTATCGCCGCTGCCGCGCTGGCTCCGGCACCTGCCCTTGCAGGTTC
GACCGAGGGCAAGCTGCAGGTGAAGGTGCTCGGCACCGGCGTTCTGCCGGACGGCAAGATCGTCGACGTGAAGTACGATC
CGCTCGGCCTGACCGACGGCGCGCAGACCAGGGCGAACGACAATGTCGTTCCGACGATCGCCATCGAGTATTTCTTCACG
CCCAACATCTCGGCCGAGACGATCTGCTGCCTGACGCAACACCACGTGAGCGGCGCGGGCACGCTCGAGGGCGCGGACCA
TATCGTCGACCATGTGCTGGTACTTCCGGCCACGCTAACGCTGAAGTACCATCTGCCGCTGGAAGGCGGGATCAAGCCCT
ACATCGGCGCGGGGCCGTCGATGTTCCTCTACTTCGGCGAAAAGCCGGGTTCGAGCATCACCCCGCTTGGCGTCGACAAG
GTGAAGATGTCCAACGACCTCGGCTTTGCGCTACAGGCCGGCGTCGACATCCCGGTCAACGACAAGGGCCTGGGCGTGAC
GCTCGATGCCAAGAAGTACTTCATGGACACCACCGCCCACTTCTACGTGAGCGGGACCGAAGTGCTCACCACCAAGCACT
CGCTCGATCCTTGGGTGGTGAGCGCGGGGCTGTCCTACCGCTTCTGA

Upstream 100 bases:

>100_bases
GTCAATGTCCCCTGATTCGGCCCGGTGCATCAGGCTGACCAAGCCACGGACGATGCGAGGCCTGCGAGGGGCAGGCCAGC
CGTGGCGCAGGATCTGGACA

Downstream 100 bases:

>100_bases
CCGGTTCCCTGTCCACCCGGCGCCCCCACGCGCGCCGGGCATAGGGACGGCGGGCAGGAAACCTCGAGGTTCTGGGATCG
CCTCGATGGTTCTCCTGCCC

Product: OmpW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKKLLTAALPVIIAAAALAPAPALAGSTEGKLQVKVLGTGVLPDGKIVDVKYDPLGLTDGAQTRANDNVVPTIAIEYFFT
PNISAETICCLTQHHVSGAGTLEGADHIVDHVLVLPATLTLKYHLPLEGGIKPYIGAGPSMFLYFGEKPGSSITPLGVDK
VKMSNDLGFALQAGVDIPVNDKGLGVTLDAKKYFMDTTAHFYVSGTEVLTTKHSLDPWVVSAGLSYRF

Sequences:

>Translated_228_residues
MKKLLTAALPVIIAAAALAPAPALAGSTEGKLQVKVLGTGVLPDGKIVDVKYDPLGLTDGAQTRANDNVVPTIAIEYFFT
PNISAETICCLTQHHVSGAGTLEGADHIVDHVLVLPATLTLKYHLPLEGGIKPYIGAGPSMFLYFGEKPGSSITPLGVDK
VKMSNDLGFALQAGVDIPVNDKGLGVTLDAKKYFMDTTAHFYVSGTEVLTTKHSLDPWVVSAGLSYRF
>Mature_228_residues
MKKLLTAALPVIIAAAALAPAPALAGSTEGKLQVKVLGTGVLPDGKIVDVKYDPLGLTDGAQTRANDNVVPTIAIEYFFT
PNISAETICCLTQHHVSGAGTLEGADHIVDHVLVLPATLTLKYHLPLEGGIKPYIGAGPSMFLYFGEKPGSSITPLGVDK
VKMSNDLGFALQAGVDIPVNDKGLGVTLDAKKYFMDTTAHFYVSGTEVLTTKHSLDPWVVSAGLSYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 23989; Mature: 23989

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLTAALPVIIAAAALAPAPALAGSTEGKLQVKVLGTGVLPDGKIVDVKYDPLGLTDG
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCC
AQTRANDNVVPTIAIEYFFTPNISAETICCLTQHHVSGAGTLEGADHIVDHVLVLPATLT
CCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHEEEEEEE
LKYHLPLEGGIKPYIGAGPSMFLYFGEKPGSSITPLGVDKVKMSNDLGFALQAGVDIPVN
EEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCC
DKGLGVTLDAKKYFMDTTAHFYVSGTEVLTTKHSLDPWVVSAGLSYRF
CCCCEEEECCHHEEEECCEEEEEECCEEEEEECCCCCEEEECCCCCCC
>Mature Secondary Structure
MKKLLTAALPVIIAAAALAPAPALAGSTEGKLQVKVLGTGVLPDGKIVDVKYDPLGLTDG
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCC
AQTRANDNVVPTIAIEYFFTPNISAETICCLTQHHVSGAGTLEGADHIVDHVLVLPATLT
CCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHEEEEEEE
LKYHLPLEGGIKPYIGAGPSMFLYFGEKPGSSITPLGVDKVKMSNDLGFALQAGVDIPVN
EEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCC
DKGLGVTLDAKKYFMDTTAHFYVSGTEVLTTKHSLDPWVVSAGLSYRF
CCCCEEEECCHHEEEECCEEEEEECCEEEEEECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]