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The map label for this gene is ybaL [C]

Identifier: 87200579

GI number: 87200579

Start: 2768850

End: 2769950

Strand: Direct

Name: ybaL [C]

Synonym: Saro_2566

Alternate gene names: 87200579

Gene position: 2768850-2769950 (Clockwise)

Preceding gene: 87200578

Following gene: 87200592

Centisome position: 77.74

GC content: 66.12

Gene sequence:

>1101_bases
ATGGAACCGGACGGCGAACTTTCGGCGCTGACGCAGGGCGCCAACTCTGTACTGGGGTCGCCGCTGCGCCTGCTGACGGG
CACGCTGATCTACGAACTGGCAGTCTATGTCGTGTCCACCTGCGGTTTCATGTTCGCAGGCTGGCCGCTGGGCGATGCGT
CCTACATGGTGCTGCTGACGATCTTCTCGGTCGGCTATGGCGAGATCCGCCCGGTTGACACCCTCTTCCTGCGCTGGTGG
ACGAGCGGGACGATCGTCCTGGGCTGTACCGGGCTGATCGTGCTGACCGGCGCGCTGGTGCAGGTCTTCACCCTGTTTCA
ATTCCGACGCCTGCTGGGGCTGGACCGTATGATGACCGAAATCGAGAAGCTGGATGGCCACGTAATCATCTGCGGCTATG
GCCGGATCGGCGTGCAGCTCGCCCGGGCGATGACCGAGGCGCGGCGGCCGTTCCTGATCCTGGAACGAGACCACGCCAAG
GCCGACGAGGCCAAGACGCAAGGCTTCCTGTGCATGGTCGGCGAGGCCACGCACGAGGAGACGCTGAAAGCGGCGGGGAT
CGCGCGGGCCAAGGTGCTGGCGACGGTGCTGCCCGACGACGCGGCCAACGTGTTCATCACGCTCTCGGCGCGCAATCTCA
ACCCCGGCATCGAGATCATCGCGCGCGGCGAAGCGCCGACCACCGAGAACAAGCTGTTCCACGCGGGCGCCGACAAGGTG
GTCATGCCCACGCACATCGGCGCCGAACGGATCGTCGAGATGATCCTCTACCCGGCAACCGGCGAAGCGCTGGCGCAGAT
CGGCGCAGTGAAGCGCAACCTCCACGACTTCGGCCTCGACCTCGAGGTCGTGGAACTCCTGCCCGACGGTGCGCTGACCG
GAGAGACGGTGGGAGAGGCCGAGCGGCGCGGCGATGGCGCGTTCTTTGTCGTGCAGATCGACCGAACCAACGGTCAGTCC
ATCGAACACCCCGGCGAGGATGTGACGCTGGAGGCGGGCGACAAGGTCATGCTGGTGGTGCGCGGCAGCAGATTGTCCGC
CGGCGCGGTGTTCAGCGCGACAAGGAAGCCGGTCAAGCGCGGGCGGGCCTTTTCGGGATAG

Upstream 100 bases:

>100_bases
TGGCAGCGCTGACCGGGGTCGCCGCCCTGTTCTGGCTGGCGGAGCGTCTGGGGCTTTCCTGAACTGGACAAGCAAACGCC
CGGCCTTCTAGGACGGATCG

Downstream 100 bases:

>100_bases
CGCCGCGCCATCCGCCCGTGTCCCGCCTTCGCTCGACACGGACGGATGTGGCAGGCGTCCTCAGCCGTGGGCGCCGAAGT
AGTTGGCGATGGCCACCGCG

Product: TrkA-N

Products: NA

Alternate protein names: MjK1 [H]

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MEPDGELSALTQGANSVLGSPLRLLTGTLIYELAVYVVSTCGFMFAGWPLGDASYMVLLTIFSVGYGEIRPVDTLFLRWW
TSGTIVLGCTGLIVLTGALVQVFTLFQFRRLLGLDRMMTEIEKLDGHVIICGYGRIGVQLARAMTEARRPFLILERDHAK
ADEAKTQGFLCMVGEATHEETLKAAGIARAKVLATVLPDDAANVFITLSARNLNPGIEIIARGEAPTTENKLFHAGADKV
VMPTHIGAERIVEMILYPATGEALAQIGAVKRNLHDFGLDLEVVELLPDGALTGETVGEAERRGDGAFFVVQIDRTNGQS
IEHPGEDVTLEAGDKVMLVVRGSRLSAGAVFSATRKPVKRGRAFSG

Sequences:

>Translated_366_residues
MEPDGELSALTQGANSVLGSPLRLLTGTLIYELAVYVVSTCGFMFAGWPLGDASYMVLLTIFSVGYGEIRPVDTLFLRWW
TSGTIVLGCTGLIVLTGALVQVFTLFQFRRLLGLDRMMTEIEKLDGHVIICGYGRIGVQLARAMTEARRPFLILERDHAK
ADEAKTQGFLCMVGEATHEETLKAAGIARAKVLATVLPDDAANVFITLSARNLNPGIEIIARGEAPTTENKLFHAGADKV
VMPTHIGAERIVEMILYPATGEALAQIGAVKRNLHDFGLDLEVVELLPDGALTGETVGEAERRGDGAFFVVQIDRTNGQS
IEHPGEDVTLEAGDKVMLVVRGSRLSAGAVFSATRKPVKRGRAFSG
>Mature_366_residues
MEPDGELSALTQGANSVLGSPLRLLTGTLIYELAVYVVSTCGFMFAGWPLGDASYMVLLTIFSVGYGEIRPVDTLFLRWW
TSGTIVLGCTGLIVLTGALVQVFTLFQFRRLLGLDRMMTEIEKLDGHVIICGYGRIGVQLARAMTEARRPFLILERDHAK
ADEAKTQGFLCMVGEATHEETLKAAGIARAKVLATVLPDDAANVFITLSARNLNPGIEIIARGEAPTTENKLFHAGADKV
VMPTHIGAERIVEMILYPATGEALAQIGAVKRNLHDFGLDLEVVELLPDGALTGETVGEAERRGDGAFFVVQIDRTNGQS
IEHPGEDVTLEAGDKVMLVVRGSRLSAGAVFSATRKPVKRGRAFSG

Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1786685, Length=136, Percent_Identity=31.6176470588235, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR003280
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 39413; Mature: 39413

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPDGELSALTQGANSVLGSPLRLLTGTLIYELAVYVVSTCGFMFAGWPLGDASYMVLLT
CCCCCCHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IFSVGYGEIRPVDTLFLRWWTSGTIVLGCTGLIVLTGALVQVFTLFQFRRLLGLDRMMTE
HHHCCCCCCCCHHHEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKLDGHVIICGYGRIGVQLARAMTEARRPFLILERDHAKADEAKTQGFLCMVGEATHEE
HHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCEEEEECCCCHHH
TLKAAGIARAKVLATVLPDDAANVFITLSARNLNPGIEIIARGEAPTTENKLFHAGADKV
HHHHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCEEECCCCCE
VMPTHIGAERIVEMILYPATGEALAQIGAVKRNLHDFGLDLEVVELLPDGALTGETVGEA
EECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH
ERRGDGAFFVVQIDRTNGQSIEHPGEDVTLEAGDKVMLVVRGSRLSAGAVFSATRKPVKR
HHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHC
GRAFSG
CCCCCC
>Mature Secondary Structure
MEPDGELSALTQGANSVLGSPLRLLTGTLIYELAVYVVSTCGFMFAGWPLGDASYMVLLT
CCCCCCHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IFSVGYGEIRPVDTLFLRWWTSGTIVLGCTGLIVLTGALVQVFTLFQFRRLLGLDRMMTE
HHHCCCCCCCCHHHEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKLDGHVIICGYGRIGVQLARAMTEARRPFLILERDHAKADEAKTQGFLCMVGEATHEE
HHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCEEEEECCCCHHH
TLKAAGIARAKVLATVLPDDAANVFITLSARNLNPGIEIIARGEAPTTENKLFHAGADKV
HHHHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCEEECCCCCE
VMPTHIGAERIVEMILYPATGEALAQIGAVKRNLHDFGLDLEVVELLPDGALTGETVGEA
EECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH
ERRGDGAFFVVQIDRTNGQSIEHPGEDVTLEAGDKVMLVVRGSRLSAGAVFSATRKPVKR
HHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHC
GRAFSG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]