| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ppc [H]
Identifier: 87200580
GI number: 87200580
Start: 2770011
End: 2772794
Strand: Reverse
Name: ppc [H]
Synonym: Saro_2567
Alternate gene names: 87200580
Gene position: 2772794-2770011 (Counterclockwise)
Preceding gene: 87200581
Following gene: 87200564
Centisome position: 77.85
GC content: 67.71
Gene sequence:
>2784_bases ATGAAGACGGTCGCCAAGCTCAAGGCCAGGTTGCAGAAACTCCATGAGCGGACGGCCGAAACGCCGCTGTTCAACCCGGT ATTCCAGCTCAGCCACGATCTCTCGCGCATGCTCGAGAGCGGGGGCCTGGATCTCGACGATCTCGACGGACTCGTCGCCG AACTGGAGTGCGAGGCGCTGCAGAGCCGCGCGGTGCGCCTCAAGCGCCTCGTCGCGCCCACCGCGCCAGAGGAAAACCTT TCGCGGATCGATGCGCTGAATCCCGAGGAAGCGGGCTTTTCGGAGTTTCGCGCCCGCTGGGAAAGGCCGCTCCTCCACGC AGTCTTCACCGCGCATCCCACCTTCCTGCTCAGCCCCGCGCAGGCCGACGCTGTCGCCACCGCCGCGTTGACCGACGACC CGCAGGCTTCAACCGTCTGCACGGTTCCGTCCAGCGGGCCGAAGATCACGCTCGAATTCGAGCATGTCGAGGTTTGCAAC GCCATCGCCCGCGCGGCAGCGGCGCGCGACCGCATCAACGCCACGCTGCTTGCCCATGCGCGCCAGCGCTGGCCTGGGCG CTGGCTCGATTTCCGCCCGCTGCCGTTCCGTTTCGCCACCTGGGTTGGCTATGACATGGATGGCCGCACCGACATCGGCT GGACCACCTCCATCGCCTTCCGCCTGCGCGAGAAGGCGCAGCGCCTGGCAAGCTACGCCGCCAGCCTGCGCGCCATCGAC GAAGGCCACCCGCTGCTCGTCACGCTCGACGCCGCGCAGGCCTATTCGTCGGAAATGGCCGAGCTGTTCTCCTCGCCGCT CGACACGCCCGAAGCGCTTGCCGCCGCCGCGAACCGCCTGACCGCCGACGATCCGGCCAAGCTTCTCAGCCTCGCCCCGC TGATTCAGTCGCTGGAGGCCGAGGCGAGGACGGCGGATGGCGATGCGGCCATCGGCCTTGCCACGCTCGCCGCAGCCATG CGCGCGGACGGCCTGGGCGTCGGCTGGATCCACTTCCGCGTGAACTCCTCGCAGCTCCACAATGCGCTGCGCCGCCGGAT CGACCCGGATGGCACGCTCGATCTCGGTAGCAAGGGCGCCCTTTCGCGCCTGCGCGAGCTTCTGGCCGAGGTGAAGCCGC TGCGCGTCAACTTCGGCGCGCTCGCCATCGAGACCAGCACCGCGATGCGCCAGTTCCTGGTCATGGCAAAGGTGCTCCAG CATATCGATGCCGACGCGCCGATCCGCATGCTGATCGCCGAATGCGAGCAGCCGCAGACGGTCCTCGCCGCACTCTACTT CGCCCGCCTTTTCGGCATCGAGGACAAGGTCGACGTATCGCCCCTGTTCGAGACCGAGACCGCACTCGAACATGGCGGCC GCTTCCTCGAAGCCCTGCTGGCCGAAGACGCCTACCGCACCTATGCGCGCCGCCGTGGCCGGGTCTCGATCCAGACCGGC TTTTCCGATGCCGGGCGCTTCATGGGCCAGCTACCCGCAGCGCTTGCCATCGAACGCCTCCAGGGCCGGCTTGCCGAAGC GATGAAGGCCAACGGCCTGACCGACGTTGCCGCGCTGATCTTCGATACACACGGCGAGTCCATGGGGCGCGGCGCCCATC CTTCGGGCTTTGCCGACCGCCTCACCTGGCCGCTGTCGCGCTGGGCGCGGGGGCGCTTTGCCAGGGCAGGCATCGCCATC GAGGCGGAGGCGAGCTTCCAGGGCGGCGATGGCTACCTGTTCTTCCGCAACGACGAACTGGCGCTCGCAACGCTCGTCCG TATCGCCGAGGCAGAGGCCCAGATCCCTGCCAACGGCGAGAAAGACCCGTTCTACGACCGCACCGACCTCAGCCTGGACT TCTACCGGTCGATCCGCCGCGTTCAGCGCGAACACCTCGAAAGCGCCACGTATTCGCGCGCGTTGACGGCGTTCGGGCTC GGCCTGCTCAAGACTACCGGCAGCCGCGTCTCACGCCGCCAATCCGACATTGGCGCCGACCGCACGATGAGCCTGCGACA GATCCGCGCGATCCCTCACAACGCCATTCTCCAGCAGATCGGCTATCCCGTGAACGTGATCGCGGGCGCGGGGACGGCGG CGGGCAAGGAGATGGAATCCATCGCTGAACTGCTCGGCCGGTCGGAGCGCGGCAACCAGCTCGTCCGCTTGCTGCGCGCC GCCAACGGCATTGCCTCGATCAAGACCGTGGCCGCGCATGGAGAGCTGTTCAATTCGGCCTATTGGGCCAGCCGGCCCTA TCGCGGCACCGAGACGGCGCTTGAAAACGCCTGCCTCGCGCTTGCCGAATACCTGACCAAGGACGACCGCTCGGGCGTGT TCCGCCGCCTGACCTCGCGGCTGCGGGTCGACTGGATGAAGCTTCACCGCCTGCTCTCGCTCGTCCCCGGCCAGAAGGCT GGGCGCGATCCGGCGCAGGATGCGGATCGCCGCAATATCGGCCTGCTCCAGTCTCTGCGCCTATCCCTGCTGATGCACAT GTTCATCCGCGCGGTGCAGGTCCCGCCCTTCGCGCGGTCCAACGACGTCAGCCGCGAGGACGTGCTCGAGATGGTGCTGT CGCTGCGGGTCGACGATGCGCTGGCCCAGCTTCGCCGCGCCTATCCGGTGATAGAGCCCGAGATCACCGATTTCGCGGTG GACGAGGAGACCGACTACCCGGACCATCGCGGCGAGGATTACGGCGCCATCCGCGCCCGTTTCATCGACCCGATCGAACG GGCCCACGCCCTCAACATCCGCATCGCGGTGGCCATCGCCAACTACTTCGGCGCCCACGGCTGA
Upstream 100 bases:
>100_bases GGTTGTCGGTAAGGGCAAACCCGATGAAGCAGCAATCGAAGCCGCCGCGCGCGAAGCTTCGGCATTGGGGCAGTAAGCGG ATACAGGGAATTCAGTGGAC
Downstream 100 bases:
>100_bases GGACGCCTGCCACATCCGTCCGTGTCGAGCGAAGGCGGGACACGGGCGGATGGCGCGGCGCTATCCCGAAAAGGCCCGCC CGCGCTTGACCGGCTTCCTT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 927; Mature: 927
Protein sequence:
>927_residues MKTVAKLKARLQKLHERTAETPLFNPVFQLSHDLSRMLESGGLDLDDLDGLVAELECEALQSRAVRLKRLVAPTAPEENL SRIDALNPEEAGFSEFRARWERPLLHAVFTAHPTFLLSPAQADAVATAALTDDPQASTVCTVPSSGPKITLEFEHVEVCN AIARAAAARDRINATLLAHARQRWPGRWLDFRPLPFRFATWVGYDMDGRTDIGWTTSIAFRLREKAQRLASYAASLRAID EGHPLLVTLDAAQAYSSEMAELFSSPLDTPEALAAAANRLTADDPAKLLSLAPLIQSLEAEARTADGDAAIGLATLAAAM RADGLGVGWIHFRVNSSQLHNALRRRIDPDGTLDLGSKGALSRLRELLAEVKPLRVNFGALAIETSTAMRQFLVMAKVLQ HIDADAPIRMLIAECEQPQTVLAALYFARLFGIEDKVDVSPLFETETALEHGGRFLEALLAEDAYRTYARRRGRVSIQTG FSDAGRFMGQLPAALAIERLQGRLAEAMKANGLTDVAALIFDTHGESMGRGAHPSGFADRLTWPLSRWARGRFARAGIAI EAEASFQGGDGYLFFRNDELALATLVRIAEAEAQIPANGEKDPFYDRTDLSLDFYRSIRRVQREHLESATYSRALTAFGL GLLKTTGSRVSRRQSDIGADRTMSLRQIRAIPHNAILQQIGYPVNVIAGAGTAAGKEMESIAELLGRSERGNQLVRLLRA ANGIASIKTVAAHGELFNSAYWASRPYRGTETALENACLALAEYLTKDDRSGVFRRLTSRLRVDWMKLHRLLSLVPGQKA GRDPAQDADRRNIGLLQSLRLSLLMHMFIRAVQVPPFARSNDVSREDVLEMVLSLRVDDALAQLRRAYPVIEPEITDFAV DEETDYPDHRGEDYGAIRARFIDPIERAHALNIRIAVAIANYFGAHG
Sequences:
>Translated_927_residues MKTVAKLKARLQKLHERTAETPLFNPVFQLSHDLSRMLESGGLDLDDLDGLVAELECEALQSRAVRLKRLVAPTAPEENL SRIDALNPEEAGFSEFRARWERPLLHAVFTAHPTFLLSPAQADAVATAALTDDPQASTVCTVPSSGPKITLEFEHVEVCN AIARAAAARDRINATLLAHARQRWPGRWLDFRPLPFRFATWVGYDMDGRTDIGWTTSIAFRLREKAQRLASYAASLRAID EGHPLLVTLDAAQAYSSEMAELFSSPLDTPEALAAAANRLTADDPAKLLSLAPLIQSLEAEARTADGDAAIGLATLAAAM RADGLGVGWIHFRVNSSQLHNALRRRIDPDGTLDLGSKGALSRLRELLAEVKPLRVNFGALAIETSTAMRQFLVMAKVLQ HIDADAPIRMLIAECEQPQTVLAALYFARLFGIEDKVDVSPLFETETALEHGGRFLEALLAEDAYRTYARRRGRVSIQTG FSDAGRFMGQLPAALAIERLQGRLAEAMKANGLTDVAALIFDTHGESMGRGAHPSGFADRLTWPLSRWARGRFARAGIAI EAEASFQGGDGYLFFRNDELALATLVRIAEAEAQIPANGEKDPFYDRTDLSLDFYRSIRRVQREHLESATYSRALTAFGL GLLKTTGSRVSRRQSDIGADRTMSLRQIRAIPHNAILQQIGYPVNVIAGAGTAAGKEMESIAELLGRSERGNQLVRLLRA ANGIASIKTVAAHGELFNSAYWASRPYRGTETALENACLALAEYLTKDDRSGVFRRLTSRLRVDWMKLHRLLSLVPGQKA GRDPAQDADRRNIGLLQSLRLSLLMHMFIRAVQVPPFARSNDVSREDVLEMVLSLRVDDALAQLRRAYPVIEPEITDFAV DEETDYPDHRGEDYGAIRARFIDPIERAHALNIRIAVAIANYFGAHG >Mature_927_residues MKTVAKLKARLQKLHERTAETPLFNPVFQLSHDLSRMLESGGLDLDDLDGLVAELECEALQSRAVRLKRLVAPTAPEENL SRIDALNPEEAGFSEFRARWERPLLHAVFTAHPTFLLSPAQADAVATAALTDDPQASTVCTVPSSGPKITLEFEHVEVCN AIARAAAARDRINATLLAHARQRWPGRWLDFRPLPFRFATWVGYDMDGRTDIGWTTSIAFRLREKAQRLASYAASLRAID EGHPLLVTLDAAQAYSSEMAELFSSPLDTPEALAAAANRLTADDPAKLLSLAPLIQSLEAEARTADGDAAIGLATLAAAM RADGLGVGWIHFRVNSSQLHNALRRRIDPDGTLDLGSKGALSRLRELLAEVKPLRVNFGALAIETSTAMRQFLVMAKVLQ HIDADAPIRMLIAECEQPQTVLAALYFARLFGIEDKVDVSPLFETETALEHGGRFLEALLAEDAYRTYARRRGRVSIQTG FSDAGRFMGQLPAALAIERLQGRLAEAMKANGLTDVAALIFDTHGESMGRGAHPSGFADRLTWPLSRWARGRFARAGIAI EAEASFQGGDGYLFFRNDELALATLVRIAEAEAQIPANGEKDPFYDRTDLSLDFYRSIRRVQREHLESATYSRALTAFGL GLLKTTGSRVSRRQSDIGADRTMSLRQIRAIPHNAILQQIGYPVNVIAGAGTAAGKEMESIAELLGRSERGNQLVRLLRA ANGIASIKTVAAHGELFNSAYWASRPYRGTETALENACLALAEYLTKDDRSGVFRRLTSRLRVDWMKLHRLLSLVPGQKA GRDPAQDADRRNIGLLQSLRLSLLMHMFIRAVQVPPFARSNDVSREDVLEMVLSLRVDDALAQLRRAYPVIEPEITDFAV DEETDYPDHRGEDYGAIRARFIDPIERAHALNIRIAVAIANYFGAHG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 102080; Mature: 102080
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVAKLKARLQKLHERTAETPLFNPVFQLSHDLSRMLESGGLDLDDLDGLVAELECEAL CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QSRAVRLKRLVAPTAPEENLSRIDALNPEEAGFSEFRARWERPLLHAVFTAHPTFLLSPA HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCC QADAVATAALTDDPQASTVCTVPSSGPKITLEFEHVEVCNAIARAAAARDRINATLLAHA HHHHHEEEEECCCCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RQRWPGRWLDFRPLPFRFATWVGYDMDGRTDIGWTTSIAFRLREKAQRLASYAASLRAID HHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC EGHPLLVTLDAAQAYSSEMAELFSSPLDTPEALAAAANRLTADDPAKLLSLAPLIQSLEA CCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EARTADGDAAIGLATLAAAMRADGLGVGWIHFRVNSSQLHNALRRRIDPDGTLDLGSKGA HHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCHHH LSRLRELLAEVKPLRVNFGALAIETSTAMRQFLVMAKVLQHIDADAPIRMLIAECEQPQT HHHHHHHHHHCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHH VLAALYFARLFGIEDKVDVSPLFETETALEHGGRFLEALLAEDAYRTYARRRGRVSIQTG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC FSDAGRFMGQLPAALAIERLQGRLAEAMKANGLTDVAALIFDTHGESMGRGAHPSGFADR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH LTWPLSRWARGRFARAGIAIEAEASFQGGDGYLFFRNDELALATLVRIAEAEAQIPANGE HHHHHHHHHCCCHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC KDPFYDRTDLSLDFYRSIRRVQREHLESATYSRALTAFGLGLLKTTGSRVSRRQSDIGAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC RTMSLRQIRAIPHNAILQQIGYPVNVIAGAGTAAGKEMESIAELLGRSERGNQLVRLLRA CHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH ANGIASIKTVAAHGELFNSAYWASRPYRGTETALENACLALAEYLTKDDRSGVFRRLTSR HCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LRVDWMKLHRLLSLVPGQKAGRDPAQDADRRNIGLLQSLRLSLLMHMFIRAVQVPPFARS HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC NDVSREDVLEMVLSLRVDDALAQLRRAYPVIEPEITDFAVDEETDYPDHRGEDYGAIRAR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHH FIDPIERAHALNIRIAVAIANYFGAHG HHHHHHHHHHEEEEEEEEEHHHHCCCC >Mature Secondary Structure MKTVAKLKARLQKLHERTAETPLFNPVFQLSHDLSRMLESGGLDLDDLDGLVAELECEAL CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QSRAVRLKRLVAPTAPEENLSRIDALNPEEAGFSEFRARWERPLLHAVFTAHPTFLLSPA HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCC QADAVATAALTDDPQASTVCTVPSSGPKITLEFEHVEVCNAIARAAAARDRINATLLAHA HHHHHEEEEECCCCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RQRWPGRWLDFRPLPFRFATWVGYDMDGRTDIGWTTSIAFRLREKAQRLASYAASLRAID HHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC EGHPLLVTLDAAQAYSSEMAELFSSPLDTPEALAAAANRLTADDPAKLLSLAPLIQSLEA CCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EARTADGDAAIGLATLAAAMRADGLGVGWIHFRVNSSQLHNALRRRIDPDGTLDLGSKGA HHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCHHH LSRLRELLAEVKPLRVNFGALAIETSTAMRQFLVMAKVLQHIDADAPIRMLIAECEQPQT HHHHHHHHHHCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHH VLAALYFARLFGIEDKVDVSPLFETETALEHGGRFLEALLAEDAYRTYARRRGRVSIQTG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC FSDAGRFMGQLPAALAIERLQGRLAEAMKANGLTDVAALIFDTHGESMGRGAHPSGFADR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH LTWPLSRWARGRFARAGIAIEAEASFQGGDGYLFFRNDELALATLVRIAEAEAQIPANGE HHHHHHHHHCCCHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC KDPFYDRTDLSLDFYRSIRRVQREHLESATYSRALTAFGLGLLKTTGSRVSRRQSDIGAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC RTMSLRQIRAIPHNAILQQIGYPVNVIAGAGTAAGKEMESIAELLGRSERGNQLVRLLRA CHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH ANGIASIKTVAAHGELFNSAYWASRPYRGTETALENACLALAEYLTKDDRSGVFRRLTSR HCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LRVDWMKLHRLLSLVPGQKAGRDPAQDADRRNIGLLQSLRLSLLMHMFIRAVQVPPFARS HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC NDVSREDVLEMVLSLRVDDALAQLRRAYPVIEPEITDFAVDEETDYPDHRGEDYGAIRAR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHH FIDPIERAHALNIRIAVAIANYFGAHG HHHHHHHHHHEEEEEEEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA