| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200563
Identifier: 87200563
GI number: 87200563
Start: 2753448
End: 2753918
Strand: Direct
Name: 87200563
Synonym: Saro_2550
Alternate gene names: NA
Gene position: 2753448-2753918 (Clockwise)
Preceding gene: 87200561
Following gene: 87200565
Centisome position: 77.31
GC content: 66.24
Gene sequence:
>471_bases ATGAACAAAAATGATCGAGATCGGCTCGCCACTATAAGCGCAATGCTCGGCGAACTCCTCGCCACCACCGGCGAGGGCGA GAAGGCAGAGCCAACTGCCGAGCAACTGCTCCATGAAGCAAGGGCGAAGATAGCGGCTCGCCGCCGCCGTCAGGAACTGT TCCCCGGGATCCAGGTCGCGGACCCCGCGTGGGACCTGCTCCTGGAACTGTTCGTGCACCGCTGCGAAGGGCGTCGGATA TCGGTGACCGGCCTTGGCCTCAGCGCCAACGTGCCCGGCGCGACCGTGCTTCGCTGGCTTGCGATGTTCCACGACAGCGG CCTGATCGTCCGCGAACCCGACCCGCAGGACCGCCGCCGCATCTGGGTGCACCTGACGGACGAAGGGCGCGACCGCGTGG TCAAGGCGCTTGTCGTCATGCTTGCGCCGGAACAGCGCGAGACCTTCCGGTTGCCGCAGCTCGCTGCCTGA
Upstream 100 bases:
>100_bases ATATTCGCTCATTTTCCTATCAATTTCAACCGTTTGCATTTGCAAATCTGCGTTTTAATCCGCATGGATTATCTCGGGGT TGGACTGGGAATGCGAAGGT
Downstream 100 bases:
>100_bases GCGGGCTGCGGCGCGCCATGCGTCAGCCGCGTCCGCGGTAAGGCGCAACCCCTTGATCCGGAAGCCAAAGACCGGCCGGC GGCGGACCCGATTGCCAGAA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: MarR-Family Transcriptional Regulator; Regulatory Protein; Regulatory Protein MarR; Response Regulator Receiver Protein
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MNKNDRDRLATISAMLGELLATTGEGEKAEPTAEQLLHEARAKIAARRRRQELFPGIQVADPAWDLLLELFVHRCEGRRI SVTGLGLSANVPGATVLRWLAMFHDSGLIVREPDPQDRRRIWVHLTDEGRDRVVKALVVMLAPEQRETFRLPQLAA
Sequences:
>Translated_156_residues MNKNDRDRLATISAMLGELLATTGEGEKAEPTAEQLLHEARAKIAARRRRQELFPGIQVADPAWDLLLELFVHRCEGRRI SVTGLGLSANVPGATVLRWLAMFHDSGLIVREPDPQDRRRIWVHLTDEGRDRVVKALVVMLAPEQRETFRLPQLAA >Mature_156_residues MNKNDRDRLATISAMLGELLATTGEGEKAEPTAEQLLHEARAKIAARRRRQELFPGIQVADPAWDLLLELFVHRCEGRRI SVTGLGLSANVPGATVLRWLAMFHDSGLIVREPDPQDRRRIWVHLTDEGRDRVVKALVVMLAPEQRETFRLPQLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17578; Mature: 17578
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNDRDRLATISAMLGELLATTGEGEKAEPTAEQLLHEARAKIAARRRRQELFPGIQVA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC DPAWDLLLELFVHRCEGRRISVTGLGLSANVPGATVLRWLAMFHDSGLIVREPDPQDRRR CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEE IWVHLTDEGRDRVVKALVVMLAPEQRETFRLPQLAA EEEEECCCCHHHHHHHHHHHHCCCCHHHCCCCCCCC >Mature Secondary Structure MNKNDRDRLATISAMLGELLATTGEGEKAEPTAEQLLHEARAKIAARRRRQELFPGIQVA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC DPAWDLLLELFVHRCEGRRISVTGLGLSANVPGATVLRWLAMFHDSGLIVREPDPQDRRR CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEE IWVHLTDEGRDRVVKALVVMLAPEQRETFRLPQLAA EEEEECCCCHHHHHHHHHHHHCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA