| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200533
Identifier: 87200533
GI number: 87200533
Start: 2723345
End: 2723578
Strand: Reverse
Name: 87200533
Synonym: Saro_2520
Alternate gene names: NA
Gene position: 2723578-2723345 (Counterclockwise)
Preceding gene: 87200534
Following gene: 87200532
Centisome position: 76.47
GC content: 67.52
Gene sequence:
>234_bases ATGGCAATGCCCGCCGCCGAGATCGAGGCCATGATCCGCGCGGCCCTGCCGGACGCGGACGTTGAGATCACCGATCTTGC CGGCGACGGCGACCACTACGCTGCGCGCGTGGTTTCGGCTGCGTTCGCCGGCCTTTCGCGCGTGAAGCAGCACAAGCTGG TCTATGACGCCCTCGGTGGGCGCATGGGCGGCGAGCTTCACGCCTTGCAACTGACGACCGCCGTTCCCAACTGA
Upstream 100 bases:
>100_bases ACCTGGTTTCCGCAGGCGTCGAGACCGACGAGGCCGAGATCCGCACCGCGATGGAAGCCAAGTCCGTCGATGCGCGCCGC CAGCTGATGGGCGAAGCCTG
Downstream 100 bases:
>100_bases GAGCGGAAAGGAAACCCATTCCCCATGTCGAACACCACCGAAGAGCGCATTTCCGAGATCGTGAACGGCAACGACGTCGT CCTGTTCATGAAGGGCACGC
Product: BolA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGGRMGGELHALQLTTAVPN
Sequences:
>Translated_77_residues MAMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGGRMGGELHALQLTTAVPN >Mature_76_residues AMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGGRMGGELHALQLTTAVPN
Specific function: Unknown
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 8031; Mature: 7900
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGG CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RMGGELHALQLTTAVPN CCCCCEEEEEEEECCCC >Mature Secondary Structure AMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGG CCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RMGGELHALQLTTAVPN CCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]