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The map label for this gene is ydhD [C]

Identifier: 87200532

GI number: 87200532

Start: 2722991

End: 2723320

Strand: Reverse

Name: ydhD [C]

Synonym: Saro_2519

Alternate gene names: 87200532

Gene position: 2723320-2722991 (Counterclockwise)

Preceding gene: 87200533

Following gene: 87200531

Centisome position: 76.46

GC content: 58.18

Gene sequence:

>330_bases
ATGTCGAACACCACCGAAGAGCGCATTTCCGAGATCGTGAACGGCAACGACGTCGTCCTGTTCATGAAGGGCACGCCGTT
GTTCCCGCAATGTGGTTTTTCGAGCAAGGCGGTGGCCATTCTCGAGCACCTGGGTGTCGAATACGCGACCGTCGACGTGC
TTCAGGACATGGAAATCCGTCAGGGCATCAAGTCGTTCTCCGACTGGCCGACCATTCCCCAGCTCTACGTGAAGGGTGAG
TTCGTCGGCGGATCGGACATCATGATGGAAATGTTCCAGGCAGGCGAGCTTCAGCAGGTCATGGACGACGCGGGCGTCAA
GGCAGCCTGA

Upstream 100 bases:

>100_bases
GGTCTATGACGCCCTCGGTGGGCGCATGGGCGGCGAGCTTCACGCCTTGCAACTGACGACCGCCGTTCCCAACTGAGAGC
GGAAAGGAAACCCATTCCCC

Downstream 100 bases:

>100_bases
ACGACCTGAACGGCAGGAAATTGCAGGGGCGCGGTCGGTACATGCCGGTCGCGCCTTTTTCCTTGGCTTCGTTTTTCGGG
AGGTCCCGGGAGAGGCGGAG

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSNTTEERISEIVNGNDVVLFMKGTPLFPQCGFSSKAVAILEHLGVEYATVDVLQDMEIRQGIKSFSDWPTIPQLYVKGE
FVGGSDIMMEMFQAGELQQVMDDAGVKAA

Sequences:

>Translated_109_residues
MSNTTEERISEIVNGNDVVLFMKGTPLFPQCGFSSKAVAILEHLGVEYATVDVLQDMEIRQGIKSFSDWPTIPQLYVKGE
FVGGSDIMMEMFQAGELQQVMDDAGVKAA
>Mature_108_residues
SNTTEERISEIVNGNDVVLFMKGTPLFPQCGFSSKAVAILEHLGVEYATVDVLQDMEIRQGIKSFSDWPTIPQLYVKGEF
VGGSDIMMEMFQAGELQQVMDDAGVKAA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=104, Percent_Identity=50.9615384615385, Blast_Score=114, Evalue=2e-26,
Organism=Homo sapiens, GI95113651, Length=96, Percent_Identity=52.0833333333333, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1787943, Length=105, Percent_Identity=46.6666666666667, Blast_Score=114, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17556042, Length=104, Percent_Identity=48.0769230769231, Blast_Score=111, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71988153, Length=87, Percent_Identity=47.1264367816092, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71988159, Length=85, Percent_Identity=43.5294117647059, Blast_Score=91, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6325198, Length=107, Percent_Identity=46.7289719626168, Blast_Score=111, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6320303, Length=83, Percent_Identity=50.6024096385542, Blast_Score=99, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=49.3975903614458, Blast_Score=96, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24642023, Length=98, Percent_Identity=48.9795918367347, Blast_Score=115, Evalue=6e-27,
Organism=Drosophila melanogaster, GI19921242, Length=98, Percent_Identity=44.8979591836735, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11979; Mature: 11848

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTTEERISEIVNGNDVVLFMKGTPLFPQCGFSSKAVAILEHLGVEYATVDVLQDMEIR
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
QGIKSFSDWPTIPQLYVKGEFVGGSDIMMEMFQAGELQQVMDDAGVKAA
HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
SNTTEERISEIVNGNDVVLFMKGTPLFPQCGFSSKAVAILEHLGVEYATVDVLQDMEIR
CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
QGIKSFSDWPTIPQLYVKGEFVGGSDIMMEMFQAGELQQVMDDAGVKAA
HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]