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The map label for this gene is 87200521

Identifier: 87200521

GI number: 87200521

Start: 2710971

End: 2712032

Strand: Reverse

Name: 87200521

Synonym: Saro_2508

Alternate gene names: NA

Gene position: 2712032-2710971 (Counterclockwise)

Preceding gene: 87200526

Following gene: 87200519

Centisome position: 76.15

GC content: 66.76

Gene sequence:

>1062_bases
ATGACCAGCGCCGACAACATTCTCGCTCATGCCAGCGCCATGCGGCAGTTTTCCCAGTTCGCGGGAGTGGCCGGGCTCGA
CCTGCGCCGCGCCTGCCCGCCAGACGTCTACGCATTCGTCGAGCAGGCGCAGGATGCGGAGTGGTTGCCGGCGACGGCCC
ACGTCGATGTTCTCCAGGCCGCCGCAATCGCTTCGGGCCGGGCAGACCTCGGTGTCGCATTCGCCATGTGGTGCAACATC
CGTGGCTTCGGTCCTGTGAGCCTGCTGTGGGACCATTGCACCACTGTCGACGAGGCGAGCCGCATTACCCGGCGCTACAT
GCACCTGGAGAGCGCGGCCATGCGATCGAGCACGGATACCGACGGGCACGAGGCTGCGCTGCGCCACATCCTGATGGTTC
CGGCCCGTTTCGGCGGATCGCAGTTCCTGCAGGCTACGCTGGCGCTGCAACTGCGCATCATCCGGATGCTTCTGGGCGAG
GAGTGGACGCCGATCAGGCTCGAGCTGGATCATCCCGCGCCGCCTTCGTATCGCTATCACCAGGCCGTGTTCAGATGTCC
GATCGAGTTCGAGGCGGACCGGTGCGCACTGGTTTTCCGCAAGTCGGACCTGCACCGGCCTTCGCTGCGCGGGAATGCGA
ACATGGTGCAATATCTCGAACGGCAACTGGCCCATGCGGATTCGCACTGGCCCGGCGATCTCGTCCAGCAGATCCGCTAT
TTCGTCGCCGCCAACCTGACCGAGCGCAAGGCCAACCTCGCGCATGTCTCGGGGCTCGCCGGGCTCTCGTCGCAGAGCCT
GCAACGCCGCCTGGCCGAACGGGGAACGACGTTCGCGACGATCCTCGAGGAGGTGCGCAAGCAGACGGCGGACGAGTATT
TCCGTACCGCGCGCCGCCCGAACCTGACGGAGCTTTCGCATCGACTGGGCTATACCGACGCGAGCGCGGCAAGCCGTTTC
CTGCGCCAGCACATGTCGACCGGCGCCCGCGCGTTGATGGCGCAGGTAAGGCCGGGGCGCGGTCGTCCGGGCAGTGCCCG
CGCGCTAGCGGCCGAGGCTTGA

Upstream 100 bases:

>100_bases
CGTCCAGGGATGACTGGCGGACGCCGGGTGCATGGGCATCTTGCGTTTAATCGATTAATTGATCTTGACGGATCGTGGCG
CAGTATTGTCAGATCACGTC

Downstream 100 bases:

>100_bases
GGCCAGGTCCCAAAGCCGTTCCTCTATCGAGGAACGCTGCTTTCGCGTGCTGCGCAATACGGCAAGTTCGGTGCGGACGT
TGAGCCCTCCGGCAGGACGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; AraC/XylS Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator AraC Family; Arac Family Transcriptional Regulator; AraC Family Transcription Regulator Protein; Helix-Turn-Helix AraC Domain Protein; Transcriptional Regulatory Protein AraC/XylS-Family

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTSADNILAHASAMRQFSQFAGVAGLDLRRACPPDVYAFVEQAQDAEWLPATAHVDVLQAAAIASGRADLGVAFAMWCNI
RGFGPVSLLWDHCTTVDEASRITRRYMHLESAAMRSSTDTDGHEAALRHILMVPARFGGSQFLQATLALQLRIIRMLLGE
EWTPIRLELDHPAPPSYRYHQAVFRCPIEFEADRCALVFRKSDLHRPSLRGNANMVQYLERQLAHADSHWPGDLVQQIRY
FVAANLTERKANLAHVSGLAGLSSQSLQRRLAERGTTFATILEEVRKQTADEYFRTARRPNLTELSHRLGYTDASAASRF
LRQHMSTGARALMAQVRPGRGRPGSARALAAEA

Sequences:

>Translated_353_residues
MTSADNILAHASAMRQFSQFAGVAGLDLRRACPPDVYAFVEQAQDAEWLPATAHVDVLQAAAIASGRADLGVAFAMWCNI
RGFGPVSLLWDHCTTVDEASRITRRYMHLESAAMRSSTDTDGHEAALRHILMVPARFGGSQFLQATLALQLRIIRMLLGE
EWTPIRLELDHPAPPSYRYHQAVFRCPIEFEADRCALVFRKSDLHRPSLRGNANMVQYLERQLAHADSHWPGDLVQQIRY
FVAANLTERKANLAHVSGLAGLSSQSLQRRLAERGTTFATILEEVRKQTADEYFRTARRPNLTELSHRLGYTDASAASRF
LRQHMSTGARALMAQVRPGRGRPGSARALAAEA
>Mature_352_residues
TSADNILAHASAMRQFSQFAGVAGLDLRRACPPDVYAFVEQAQDAEWLPATAHVDVLQAAAIASGRADLGVAFAMWCNIR
GFGPVSLLWDHCTTVDEASRITRRYMHLESAAMRSSTDTDGHEAALRHILMVPARFGGSQFLQATLALQLRIIRMLLGEE
WTPIRLELDHPAPPSYRYHQAVFRCPIEFEADRCALVFRKSDLHRPSLRGNANMVQYLERQLAHADSHWPGDLVQQIRYF
VAANLTERKANLAHVSGLAGLSSQSLQRRLAERGTTFATILEEVRKQTADEYFRTARRPNLTELSHRLGYTDASAASRFL
RQHMSTGARALMAQVRPGRGRPGSARALAAEA

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39257; Mature: 39126

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSADNILAHASAMRQFSQFAGVAGLDLRRACPPDVYAFVEQAQDAEWLPATAHVDVLQA
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
AAIASGRADLGVAFAMWCNIRGFGPVSLLWDHCTTVDEASRITRRYMHLESAAMRSSTDT
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
DGHEAALRHILMVPARFGGSQFLQATLALQLRIIRMLLGEEWTPIRLELDHPAPPSYRYH
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH
QAVFRCPIEFEADRCALVFRKSDLHRPSLRGNANMVQYLERQLAHADSHWPGDLVQQIRY
HHHHHCCCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FVAANLTERKANLAHVSGLAGLSSQSLQRRLAERGTTFATILEEVRKQTADEYFRTARRP
HHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
NLTELSHRLGYTDASAASRFLRQHMSTGARALMAQVRPGRGRPGSARALAAEA
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSADNILAHASAMRQFSQFAGVAGLDLRRACPPDVYAFVEQAQDAEWLPATAHVDVLQA
CCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
AAIASGRADLGVAFAMWCNIRGFGPVSLLWDHCTTVDEASRITRRYMHLESAAMRSSTDT
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
DGHEAALRHILMVPARFGGSQFLQATLALQLRIIRMLLGEEWTPIRLELDHPAPPSYRYH
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH
QAVFRCPIEFEADRCALVFRKSDLHRPSLRGNANMVQYLERQLAHADSHWPGDLVQQIRY
HHHHHCCCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FVAANLTERKANLAHVSGLAGLSSQSLQRRLAERGTTFATILEEVRKQTADEYFRTARRP
HHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
NLTELSHRLGYTDASAASRFLRQHMSTGARALMAQVRPGRGRPGSARALAAEA
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA