Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200519

Identifier: 87200519

GI number: 87200519

Start: 2709608

End: 2709940

Strand: Reverse

Name: 87200519

Synonym: Saro_2506

Alternate gene names: NA

Gene position: 2709940-2709608 (Counterclockwise)

Preceding gene: 87200521

Following gene: 87200518

Centisome position: 76.09

GC content: 70.27

Gene sequence:

>333_bases
GTGCGCCGGGATGGAGAGGTGAGCATGGCTTGCTGCGCGTTCGCGGTATTCTTGCTGATGTGGCTGACAAGGCCCCTGCG
GTGGCTGGCGGTGCGGCTCGGCCTGTCGGGGCAGGGGGCGACCGCGAACCCGGCCGTCAGCTGGCGTCCCGGCCAGCAAC
AGCTCCAGCTTCCGAGGCGCGGCCCTGCATCGTCCGTCGTAACAGCCGTGGCACTGGCTTTCATCGCCGGGCCGGCGACA
GCCGCACCGCTGGTGGATGATGCCCCGGCCACGGGCTATGCCGCAGCGTTCCATGCCATGCTGTGCGGTCCTGGTCGGGA
GGCGCGTCGATGA

Upstream 100 bases:

>100_bases
GGACATGCGGCAGATATATTGGAGACTTCTATAAATCGAAAGATTAAATCTATTGGACGCAGCAAGACCCCCTCTCTAGC
CTTTCCTCGAAGGCGACGAA

Downstream 100 bases:

>100_bases
CCAGCCTTGCGACGGAACTGCCGCTCCCCGGCCTGCCATCGTTCAGGGGCATGACCGGCCCCGCAACGGCGATGAGGCAA
CGCCGAACCTGGTTGATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRRGPASSVVTAVALAFIAGPAT
AAPLVDDAPATGYAAAFHAMLCGPGREARR

Sequences:

>Translated_110_residues
MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRRGPASSVVTAVALAFIAGPAT
AAPLVDDAPATGYAAAFHAMLCGPGREARR
>Mature_110_residues
MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRRGPASSVVTAVALAFIAGPAT
AAPLVDDAPATGYAAAFHAMLCGPGREARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11590; Mature: 11590

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCC
GPASSVVTAVALAFIAGPATAAPLVDDAPATGYAAAFHAMLCGPGREARR
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCC
GPASSVVTAVALAFIAGPATAAPLVDDAPATGYAAAFHAMLCGPGREARR
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA