| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200511
Identifier: 87200511
GI number: 87200511
Start: 2697939
End: 2698520
Strand: Reverse
Name: 87200511
Synonym: Saro_2498
Alternate gene names: NA
Gene position: 2698520-2697939 (Counterclockwise)
Preceding gene: 87200512
Following gene: 87200510
Centisome position: 75.77
GC content: 61.51
Gene sequence:
>582_bases GTGAAGCGCCCAGGCAAACTCGTGGCTGAGGATTGTGGTGTCACCACCATCGAATTCGCGCTCGTGCTGCCGGTGTTCCT GCTGGCGATCGTAGGCTGTCTGGATCTTGGCCAGATGGTCTATGCCGTCGGCGTTCTGGACGGGGCGGTCGAAAAGGCTG CGCGTTCCGCAGCGCTCGAAACCGGTGACACGACTGCTGCCGATGCCGAGGTCGAAGACGTGATGTCAAGAATCCTGCCG GGGTCCACCCTCGCAACCAGTCGCAAGAGCTACGCCAACTACTCCGACATCAACCGTCCCGAGCGATGGAACGATGCCGA CAACAACGGCACGTGTTCCGAGGGTGAGACCTACGTCGACGAGAACGGCAGCGGGGCATGGGAATCCGACGTGGGGTCCA ATGGCAATGGCAGCGCGAGCGATGTCGTTGTCTATACCGTGACCGTCACCTACGAGCCCATTTTCGCGATGCCGCTCCTT CCCATCAACTGGAACACGCGGGAACTCACATCGAGCGCGATCAAGCGCAACCAGCCCTATGCTGCGCAGCCGGGCTACGG GTCGGATTCGGGCACATGCTGA
Upstream 100 bases:
>100_bases GCGCATCGGCCAGCAGCACATTTCCGGCGACGAACGCGACCGAACTGAACACCGCATTCCAGGAGATCGCCAAGAACGTT GCCGAACTGAGGGTCTATCA
Downstream 100 bases:
>100_bases TGCGCCTCGCTCCGCCGGTTCAGCTCCTCGTGGAGCGCATTCGCGGCTGCACGTGTGGCGTTGCCACGATCGAGTTTGCC CTCATTGGGCCGATCATTTT
Product: TadE-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKRPGKLVAEDCGVTTIEFALVLPVFLLAIVGCLDLGQMVYAVGVLDGAVEKAARSAALETGDTTAADAEVEDVMSRILP GSTLATSRKSYANYSDINRPERWNDADNNGTCSEGETYVDENGSGAWESDVGSNGNGSASDVVVYTVTVTYEPIFAMPLL PINWNTRELTSSAIKRNQPYAAQPGYGSDSGTC
Sequences:
>Translated_193_residues MKRPGKLVAEDCGVTTIEFALVLPVFLLAIVGCLDLGQMVYAVGVLDGAVEKAARSAALETGDTTAADAEVEDVMSRILP GSTLATSRKSYANYSDINRPERWNDADNNGTCSEGETYVDENGSGAWESDVGSNGNGSASDVVVYTVTVTYEPIFAMPLL PINWNTRELTSSAIKRNQPYAAQPGYGSDSGTC >Mature_193_residues MKRPGKLVAEDCGVTTIEFALVLPVFLLAIVGCLDLGQMVYAVGVLDGAVEKAARSAALETGDTTAADAEVEDVMSRILP GSTLATSRKSYANYSDINRPERWNDADNNGTCSEGETYVDENGSGAWESDVGSNGNGSASDVVVYTVTVTYEPIFAMPLL PINWNTRELTSSAIKRNQPYAAQPGYGSDSGTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20430; Mature: 20430
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRPGKLVAEDCGVTTIEFALVLPVFLLAIVGCLDLGQMVYAVGVLDGAVEKAARSAALE CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGDTTAADAEVEDVMSRILPGSTLATSRKSYANYSDINRPERWNDADNNGTCSEGETYVD CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEC ENGSGAWESDVGSNGNGSASDVVVYTVTVTYEPIFAMPLLPINWNTRELTSSAIKRNQPY CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHCCEECCCCCHHHHHHHHHHCCCCC AAQPGYGSDSGTC CCCCCCCCCCCCC >Mature Secondary Structure MKRPGKLVAEDCGVTTIEFALVLPVFLLAIVGCLDLGQMVYAVGVLDGAVEKAARSAALE CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGDTTAADAEVEDVMSRILPGSTLATSRKSYANYSDINRPERWNDADNNGTCSEGETYVD CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEC ENGSGAWESDVGSNGNGSASDVVVYTVTVTYEPIFAMPLLPINWNTRELTSSAIKRNQPY CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHCCEECCCCCHHHHHHHHHHCCCCC AAQPGYGSDSGTC CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA