Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200510

Identifier: 87200510

GI number: 87200510

Start: 2697274

End: 2697939

Strand: Reverse

Name: 87200510

Synonym: Saro_2497

Alternate gene names: NA

Gene position: 2697939-2697274 (Counterclockwise)

Preceding gene: 87200511

Following gene: 87200509

Centisome position: 75.75

GC content: 62.46

Gene sequence:

>666_bases
ATGCGCCTCGCTCCGCCGGTTCAGCTCCTCGTGGAGCGCATTCGCGGCTGCACGTGTGGCGTTGCCACGATCGAGTTTGC
CCTCATTGGGCCGATCATTTTGACCATCGGCCTTTTCGGCATCGAGACTGCCTATCTCAACACGGTCGACCTGAAGCTGA
GCCAGATGGCCATGACCGTCGCCGACAATGCCTCGCGGCTCGGCCAGACGGACAACAGTTCGGTCACGCCGACCGTAACG
GAGACCGACATCGCCGAAATCATGCGCGGCGTCGAGGAAGAGGGCGCGTCCATCGACTTCGAGACACGGGGGCGGGTGAT
ACTGTCGAGCCTCGAGAAGGACAGTGCCACGGGCAAGCAGTACATCCATTGGCAGCGCTGCTACGGCAACCTCGAGCGCA
ATTCCGTTTATGGCGATGATGGAGCGAACAACGGGCTCAACGGAGATCCGCTGCAAGGCATGGGCAGCGGTACCGCCCAG
ATCACCGCCACCAGCAGCAGCACGGCGGTCATGTTCGTGGAGGTCTTCTACAGCTACGAGGGGTTGTTCGGCGACATGTT
CCTGGCAGATCGGGTCCTGCGCAAGGAGGGGGCATTCCTCATCAGGGACGACCGAAATCTCACGCCCGGCGTCACCGGCA
CGGGAGGGCAGCATGCCTGCACCTGA

Upstream 100 bases:

>100_bases
CCATCAACTGGAACACGCGGGAACTCACATCGAGCGCGATCAAGCGCAACCAGCCCTATGCTGCGCAGCCGGGCTACGGG
TCGGATTCGGGCACATGCTG

Downstream 100 bases:

>100_bases
ACAGGCGATCGGTTCCGCGTCCGGCCGGCAATGCCGTCTTCGCCCCCGGTTGCCGATCGCGCGGGTCCATCCCACGGAAA
AGTCGAGCTCTGCGGAAATG

Product: TadE-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTVADNASRLGQTDNSSVTPTVT
ETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQYIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQ
ITATSSSTAVMFVEVFYSYEGLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT

Sequences:

>Translated_221_residues
MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTVADNASRLGQTDNSSVTPTVT
ETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQYIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQ
ITATSSSTAVMFVEVFYSYEGLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT
>Mature_221_residues
MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTVADNASRLGQTDNSSVTPTVT
ETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQYIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQ
ITATSSSTAVMFVEVFYSYEGLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23759; Mature: 23759

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTV
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
ADNASRLGQTDNSSVTPTVTETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQ
HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHH
YIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQITATSSSTAVMFVEVFYSYE
HEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHC
GLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT
CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTV
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
ADNASRLGQTDNSSVTPTVTETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQ
HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHH
YIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQITATSSSTAVMFVEVFYSYE
HEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHC
GLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT
CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA