| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200510
Identifier: 87200510
GI number: 87200510
Start: 2697274
End: 2697939
Strand: Reverse
Name: 87200510
Synonym: Saro_2497
Alternate gene names: NA
Gene position: 2697939-2697274 (Counterclockwise)
Preceding gene: 87200511
Following gene: 87200509
Centisome position: 75.75
GC content: 62.46
Gene sequence:
>666_bases ATGCGCCTCGCTCCGCCGGTTCAGCTCCTCGTGGAGCGCATTCGCGGCTGCACGTGTGGCGTTGCCACGATCGAGTTTGC CCTCATTGGGCCGATCATTTTGACCATCGGCCTTTTCGGCATCGAGACTGCCTATCTCAACACGGTCGACCTGAAGCTGA GCCAGATGGCCATGACCGTCGCCGACAATGCCTCGCGGCTCGGCCAGACGGACAACAGTTCGGTCACGCCGACCGTAACG GAGACCGACATCGCCGAAATCATGCGCGGCGTCGAGGAAGAGGGCGCGTCCATCGACTTCGAGACACGGGGGCGGGTGAT ACTGTCGAGCCTCGAGAAGGACAGTGCCACGGGCAAGCAGTACATCCATTGGCAGCGCTGCTACGGCAACCTCGAGCGCA ATTCCGTTTATGGCGATGATGGAGCGAACAACGGGCTCAACGGAGATCCGCTGCAAGGCATGGGCAGCGGTACCGCCCAG ATCACCGCCACCAGCAGCAGCACGGCGGTCATGTTCGTGGAGGTCTTCTACAGCTACGAGGGGTTGTTCGGCGACATGTT CCTGGCAGATCGGGTCCTGCGCAAGGAGGGGGCATTCCTCATCAGGGACGACCGAAATCTCACGCCCGGCGTCACCGGCA CGGGAGGGCAGCATGCCTGCACCTGA
Upstream 100 bases:
>100_bases CCATCAACTGGAACACGCGGGAACTCACATCGAGCGCGATCAAGCGCAACCAGCCCTATGCTGCGCAGCCGGGCTACGGG TCGGATTCGGGCACATGCTG
Downstream 100 bases:
>100_bases ACAGGCGATCGGTTCCGCGTCCGGCCGGCAATGCCGTCTTCGCCCCCGGTTGCCGATCGCGCGGGTCCATCCCACGGAAA AGTCGAGCTCTGCGGAAATG
Product: TadE-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTVADNASRLGQTDNSSVTPTVT ETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQYIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQ ITATSSSTAVMFVEVFYSYEGLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT
Sequences:
>Translated_221_residues MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTVADNASRLGQTDNSSVTPTVT ETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQYIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQ ITATSSSTAVMFVEVFYSYEGLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT >Mature_221_residues MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTVADNASRLGQTDNSSVTPTVT ETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQYIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQ ITATSSSTAVMFVEVFYSYEGLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23759; Mature: 23759
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTV CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH ADNASRLGQTDNSSVTPTVTETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQ HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHH YIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQITATSSSTAVMFVEVFYSYE HEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHC GLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLAPPVQLLVERIRGCTCGVATIEFALIGPIILTIGLFGIETAYLNTVDLKLSQMAMTV CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH ADNASRLGQTDNSSVTPTVTETDIAEIMRGVEEEGASIDFETRGRVILSSLEKDSATGKQ HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHH YIHWQRCYGNLERNSVYGDDGANNGLNGDPLQGMGSGTAQITATSSSTAVMFVEVFYSYE HEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHC GLFGDMFLADRVLRKEGAFLIRDDRNLTPGVTGTGGQHACT CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA