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The map label for this gene is ypdP [H]

Identifier: 87200509

GI number: 87200509

Start: 2696315

End: 2697040

Strand: Reverse

Name: ypdP [H]

Synonym: Saro_2496

Alternate gene names: 87200509

Gene position: 2697040-2696315 (Counterclockwise)

Preceding gene: 87200510

Following gene: 87200507

Centisome position: 75.73

GC content: 61.71

Gene sequence:

>726_bases
ATGAGCGATCCCCAGATTTCCCGTATCGACGGCACCAGCAGCGCACGGCGCCATTTCCGCTATTTCGACTACGTGATGGC
CTCGTTCGTGGCGATCCTGTTGCTGTCGAACCTGATAGGGGCGGCGAAGCTGGCGCAGGTCGGCGGCTATACCTTCGGCG
CGGGCATCCTGTTCTTTCCCGTTTCCTACGTGATCGGCGACGTCCTGACCGAGGTATACGGCTATGCCAATGCACGGCGG
TGCGTGTGGATGGGCTTCTTCGCGCTGATCTTCATGGCGTTCATGAGCTACATCGTCGTCGCCATGCCGCCTGCGCCGGG
TTGGGATGGGCAGTCCGCCTATGAAAGCGTGTTTGGCTCTACCTGGCGAATCGTGCTTGCTTCGGTCACCGCCTTCTGGG
CCGGGGAATTCGTGAATTCGTTCGTGCTGGCGAAGATGAAGCTGCTGACCGGCGGCAAGCATCTGTGGACGCGCACCATC
GGGTCCACGGTGTTCGGACAGGCGGTCGACAGCCTGATCTTCTATCCTGTCGCGTTCCTCGGCATCTGGACGCACGAGCA
GGTTCTGACGGTCATGGTCACCAACTGGCTGATGAAGGTCGTGTGGGAAGCGGTGCTGACCCCGGTCACCTACGCCGTCG
TCGGCTGGCTCAAGGCCCGCGAAGGCGCGGATGTCTATGATACCGACACCGACTTCTCGCCCTTCGCCAAGGCGCCGCAG
GTCTGA

Upstream 100 bases:

>100_bases
AGATTAGAAGTCTCGCGCTCTATCCAGATGAGCTAAGGGCGCGCGCCGTGTCCCTTAAGCACGCTTTTCGGATCGTGCAA
ACCGGGTTAGCAGGGTGGCC

Downstream 100 bases:

>100_bases
AATGGAGAAGCCCCGCCTCTCCGGGGGCGGGAGAGGCGGGGCGCTGGGGCTGGACGGGCCCTCAGGTGTCAGTCGGCGAT
TAGGCCGATCAGCAGGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSDPQISRIDGTSSARRHFRYFDYVMASFVAILLLSNLIGAAKLAQVGGYTFGAGILFFPVSYVIGDVLTEVYGYANARR
CVWMGFFALIFMAFMSYIVVAMPPAPGWDGQSAYESVFGSTWRIVLASVTAFWAGEFVNSFVLAKMKLLTGGKHLWTRTI
GSTVFGQAVDSLIFYPVAFLGIWTHEQVLTVMVTNWLMKVVWEAVLTPVTYAVVGWLKAREGADVYDTDTDFSPFAKAPQ
V

Sequences:

>Translated_241_residues
MSDPQISRIDGTSSARRHFRYFDYVMASFVAILLLSNLIGAAKLAQVGGYTFGAGILFFPVSYVIGDVLTEVYGYANARR
CVWMGFFALIFMAFMSYIVVAMPPAPGWDGQSAYESVFGSTWRIVLASVTAFWAGEFVNSFVLAKMKLLTGGKHLWTRTI
GSTVFGQAVDSLIFYPVAFLGIWTHEQVLTVMVTNWLMKVVWEAVLTPVTYAVVGWLKAREGADVYDTDTDFSPFAKAPQ
V
>Mature_240_residues
SDPQISRIDGTSSARRHFRYFDYVMASFVAILLLSNLIGAAKLAQVGGYTFGAGILFFPVSYVIGDVLTEVYGYANARRC
VWMGFFALIFMAFMSYIVVAMPPAPGWDGQSAYESVFGSTWRIVLASVTAFWAGEFVNSFVLAKMKLLTGGKHLWTRTIG
STVFGQAVDSLIFYPVAFLGIWTHEQVLTVMVTNWLMKVVWEAVLTPVTYAVVGWLKAREGADVYDTDTDFSPFAKAPQV

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 26691; Mature: 26560

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
SDPQISRIDGTSSARRHFRYFDYVMASFVAILLLSNLIGAAKLAQVGGYTFGAGILFFP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VSYVIGDVLTEVYGYANARRCVWMGFFALIFMAFMSYIVVAMPPAPGWDGQSAYESVFGS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCH
TWRIVLASVTAFWAGEFVNSFVLAKMKLLTGGKHLWTRTIGSTVFGQAVDSLIFYPVAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWTHEQVLTVMVTNWLMKVVWEAVLTPVTYAVVGWLKAREGADVYDTDTDFSPFAKAPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]