| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200476
Identifier: 87200476
GI number: 87200476
Start: 2658391
End: 2659686
Strand: Reverse
Name: 87200476
Synonym: Saro_2463
Alternate gene names: NA
Gene position: 2659686-2658391 (Counterclockwise)
Preceding gene: 87200477
Following gene: 87200474
Centisome position: 74.68
GC content: 63.66
Gene sequence:
>1296_bases ATGAACCTGCCCTCTGTTGACAAAACGCATTCGGCTGACCTTGCAAGCTGGGTGCCTTCGGCGCTCGGCCATGCCGACTT CCCTGTCCAGAACCTGCCGTTTGGGGTTTTCGCTCCGGCTGGGGAGCGGCCGCGGATCGGCACGGCCATCGGAGATTGCG TTCTGGACCTCTGTGCGGTCGGAGCGCTGTTGCCGCCAGAAGTATTGCCGTTGCTGGAACTACCGGAACTCAACGCCCTT ATGGCCGCCCCCCGGGTCGTGAAGACTGCATTGCGCCACAGGCTCTCGGAACTGCTGTCGGATGACGCTCATCGTCCCAT GGTGGAGCCGGCTCTGCATGACGCGGCGTGCGTTGAAATGCTGCTTCCCATGCGGATCGGCGATTACACCGATTTCTACG TCGGCATTCATCACGCAACGAATATCGGCAAGCTGTTCCGGCCCGACAACCCTCTTTTGCCCAACTACAAGCACGTGCCT ATCGGGTATCATGGCCGTGCGTCCTCGATCAGGCAGAGCGGAGTGCCGGTGGCGCGACCGCGTGGCCAGCGCAGGGCGAA CGATGCGGACGTTCCGGTGTTCGGGCCTTGCACGCGGCTGGACTACGAACTCGAACTCGGCGTCTGGATCAGCGAGGGCA ACGCCTTGGGAACAACGATCCCGATTGCCGAGGCGGGCGAACACATTGCCGGGCTGTGCCTGCTAAACGACTGGTCTGCG CGCGATATCCAGGCGTGGGAATACCAGCCGCTGGGGCCGTTCCTTGCCAAGAACTTCCACACGACGATCTCGCCCTGGGT CGTGACTGCCGAGGCACTGGCACCTTTCCGGATCGCGCAGCCGCCTCGTCCCCTTGGGGACCCGGACCCGTTACCCTACC TGCGCGACGAGGCGGACCGGATGGCAGGAGCCTTTGCAATCGAACTTTCCGTATGGCTGACGAGTGAACAGATGCGGGCA GGGCGGTATCCACCTTTGCGCCTCAGCAGGGGCCCAGCGAGCAACATGTACTGGACCATTGCCCAGATGGTGACGCACCA CGCTTCGAACGGATGCGGACTAAACTCCGGCGACCTGCTTGGCACGGGCACCATCTCCGGTACGGAGCAAGGCTCGAAGG GCAGTCTGATCGAGATCAGCGAGGGCGGCAGGGTGCCGGTCGAACTGCCCACCGGCGAAACCCGCACCTTCCTCCTCGAT GGCGACGAGATCAGCTTCTCGGCCACCGCGACGGCACCAGGGCGGGCCCCGATCGGCTTTGGAGAATGCCGTGCCGTGAT CAGGCCCGCGCCATGA
Upstream 100 bases:
>100_bases GCGCACCCGCCGCGCGCCCGAGATCGGTAAGTGGGCGCATGGCAGTGAGCTCGACGGCGCGAGCGAGTGACGCGCAAACA ATTCTCGCGGACGATCGACG
Downstream 100 bases:
>100_bases TCCGGCCACGGCGTATCGCCTAGACTACGGCTCCGACGAGCCGGCCGATGCCGGCCGTAAGCGCCATGGCCAATGCTCCC CAGAAGACGACGCGAGCGAC
Product: fumarylacetoacetate hydrolase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Fumarylacetoacetate Hydrolase Family Protein; Hydroxylase; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MNLPSVDKTHSADLASWVPSALGHADFPVQNLPFGVFAPAGERPRIGTAIGDCVLDLCAVGALLPPEVLPLLELPELNAL MAAPRVVKTALRHRLSELLSDDAHRPMVEPALHDAACVEMLLPMRIGDYTDFYVGIHHATNIGKLFRPDNPLLPNYKHVP IGYHGRASSIRQSGVPVARPRGQRRANDADVPVFGPCTRLDYELELGVWISEGNALGTTIPIAEAGEHIAGLCLLNDWSA RDIQAWEYQPLGPFLAKNFHTTISPWVVTAEALAPFRIAQPPRPLGDPDPLPYLRDEADRMAGAFAIELSVWLTSEQMRA GRYPPLRLSRGPASNMYWTIAQMVTHHASNGCGLNSGDLLGTGTISGTEQGSKGSLIEISEGGRVPVELPTGETRTFLLD GDEISFSATATAPGRAPIGFGECRAVIRPAP
Sequences:
>Translated_431_residues MNLPSVDKTHSADLASWVPSALGHADFPVQNLPFGVFAPAGERPRIGTAIGDCVLDLCAVGALLPPEVLPLLELPELNAL MAAPRVVKTALRHRLSELLSDDAHRPMVEPALHDAACVEMLLPMRIGDYTDFYVGIHHATNIGKLFRPDNPLLPNYKHVP IGYHGRASSIRQSGVPVARPRGQRRANDADVPVFGPCTRLDYELELGVWISEGNALGTTIPIAEAGEHIAGLCLLNDWSA RDIQAWEYQPLGPFLAKNFHTTISPWVVTAEALAPFRIAQPPRPLGDPDPLPYLRDEADRMAGAFAIELSVWLTSEQMRA GRYPPLRLSRGPASNMYWTIAQMVTHHASNGCGLNSGDLLGTGTISGTEQGSKGSLIEISEGGRVPVELPTGETRTFLLD GDEISFSATATAPGRAPIGFGECRAVIRPAP >Mature_431_residues MNLPSVDKTHSADLASWVPSALGHADFPVQNLPFGVFAPAGERPRIGTAIGDCVLDLCAVGALLPPEVLPLLELPELNAL MAAPRVVKTALRHRLSELLSDDAHRPMVEPALHDAACVEMLLPMRIGDYTDFYVGIHHATNIGKLFRPDNPLLPNYKHVP IGYHGRASSIRQSGVPVARPRGQRRANDADVPVFGPCTRLDYELELGVWISEGNALGTTIPIAEAGEHIAGLCLLNDWSA RDIQAWEYQPLGPFLAKNFHTTISPWVVTAEALAPFRIAQPPRPLGDPDPLPYLRDEADRMAGAFAIELSVWLTSEQMRA GRYPPLRLSRGPASNMYWTIAQMVTHHASNGCGLNSGDLLGTGTISGTEQGSKGSLIEISEGGRVPVELPTGETRTFLLD GDEISFSATATAPGRAPIGFGECRAVIRPAP
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=427, Percent_Identity=46.6042154566745, Blast_Score=352, Evalue=5e-97, Organism=Caenorhabditis elegans, GI17568863, Length=420, Percent_Identity=45.7142857142857, Blast_Score=333, Evalue=7e-92, Organism=Drosophila melanogaster, GI24657182, Length=415, Percent_Identity=44.3373493975904, Blast_Score=324, Evalue=8e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 46429; Mature: 46429
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPSVDKTHSADLASWVPSALGHADFPVQNLPFGVFAPAGERPRIGTAIGDCVLDLCAV CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH GALLPPEVLPLLELPELNALMAAPRVVKTALRHRLSELLSDDAHRPMVEPALHDAACVEM CCCCCHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LLPMRIGDYTDFYVGIHHATNIGKLFRPDNPLLPNYKHVPIGYHGRASSIRQSGVPVARP HHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCC RGQRRANDADVPVFGPCTRLDYELELGVWISEGNALGTTIPIAEAGEHIAGLCLLNDWSA CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEECHHHCCCCEEEEEEECCCCC RDIQAWEYQPLGPFLAKNFHTTISPWVVTAEALAPFRIAQPPRPLGDPDPLPYLRDEADR CCCCCCCCCCCCHHHHCCCCCCCCCCEEEHHHHCCEEECCCCCCCCCCCCCCHHHHHHHH MAGAFAIELSVWLTSEQMRAGRYPPLRLSRGPASNMYWTIAQMVTHHASNGCGLNSGDLL HHCEEEEEEEEEEEHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEE GTGTISGTEQGSKGSLIEISEGGRVPVELPTGETRTFLLDGDEISFSATATAPGRAPIGF EECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCH GECRAVIRPAP HHHHEEECCCC >Mature Secondary Structure MNLPSVDKTHSADLASWVPSALGHADFPVQNLPFGVFAPAGERPRIGTAIGDCVLDLCAV CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH GALLPPEVLPLLELPELNALMAAPRVVKTALRHRLSELLSDDAHRPMVEPALHDAACVEM CCCCCHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LLPMRIGDYTDFYVGIHHATNIGKLFRPDNPLLPNYKHVPIGYHGRASSIRQSGVPVARP HHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCC RGQRRANDADVPVFGPCTRLDYELELGVWISEGNALGTTIPIAEAGEHIAGLCLLNDWSA CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEECHHHCCCCEEEEEEECCCCC RDIQAWEYQPLGPFLAKNFHTTISPWVVTAEALAPFRIAQPPRPLGDPDPLPYLRDEADR CCCCCCCCCCCCHHHHCCCCCCCCCCEEEHHHHCCEEECCCCCCCCCCCCCCHHHHHHHH MAGAFAIELSVWLTSEQMRAGRYPPLRLSRGPASNMYWTIAQMVTHHASNGCGLNSGDLL HHCEEEEEEEEEEEHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEE GTGTISGTEQGSKGSLIEISEGGRVPVELPTGETRTFLLDGDEISFSATATAPGRAPIGF EECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCH GECRAVIRPAP HHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA