| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200474
Identifier: 87200474
GI number: 87200474
Start: 2656664
End: 2657428
Strand: Reverse
Name: 87200474
Synonym: Saro_2461
Alternate gene names: NA
Gene position: 2657428-2656664 (Counterclockwise)
Preceding gene: 87200476
Following gene: 87200473
Centisome position: 74.61
GC content: 62.75
Gene sequence:
>765_bases ATGACGGAGAATGCACGGCCAGCTTGGGCTGCCAGGAACCTCGCTGAACATGAACGTGCCGGCGAACGGATTGTCGTTCG CCATTCGCATAACTGGCGCATGGCGCCGAGCCACGCGATGCTCGTCGGCCTCGTGTGTTGGGCCGGCTTTGCCGTGGTTG TGTTCCTGGTCGTGACAGGACGGGGCGGAGCCTTCGATGATGCGGGTTTGCGCATCTGGCGCGCAGCGTCGGATCTGTCC CTCCCTCGCGGTCCGGAGTGGTTGGTTGAAGCGGTCCGCGATCTTACGGCGCTTGGCGGTACTTTGCTGCGCAACATCTT CGCCGTCGCGGCAGTCATTGCGCTTCTGTTTCTCCGACTGCGCCGCGAAGCATTTCTGTTTGCCGCCACTGTATCGTCCG GCTGGATAGTCGAATTTGCCCTCAAGGTTGCCGTCGGCCGGCCAAGGCCCGTAATCGTCCCACATCTCATGGGGGCTGGA GGCAACAGTTTTCCCAGCGGGCACAGCTTCAATTCAGCAGTCGTCTATATTGCAATGGCCCTGGCCTTCGCGTCACTGAG CTCGCGAGCCAAGGTGAGGGCGACAATCATCGGTGCGGCGATCATGGGCACCCTGCTCGTCGCGGTAAGCCGTGTCTGGC TGGGGGTGCACTACCCGACCGATGTGATCGCCGGGTGGTTGGGCGGCGCGGGCTGGGCCTTTAGCGCTTCCGCCCTCCTC TACAAGCCGGCCAAGGTCGTGGCGAACGGCACGTTCAACCAATAG
Upstream 100 bases:
>100_bases CCATTGTCCGCAGAAGCGATCGTTGGAGATATTCTGCCCTATTCCGCCCGACTGCATTTCCCTCTTGCAGCCGTTGGCGG TTTTCGTGCGTTGTCGCCAC
Downstream 100 bases:
>100_bases TGCCAAGCGATGGGGGTGAAGCCCCGTCATCCATCGCTTCCAATTTCCAGCAAAGCTGGCAAGCTCGACCCGGAGCATGG GAGGGCGTCAATGGGGCTGA
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; Phosphoesterase PA-Phosphatase-Like Protein; Membrane-Associated Phospholipid Phosphatase; PAP2 Superfamily Protein; Phosphatidic Acid Phosphatase; Phosphatase PAP2-Like Family; Phosphoesterase PA-Phosphatase-Related Protein; PAP2 Family Protein; Phosphatidylglycerophosphatase B -Like Protein; Transmembrane Acid Phosphatase Protein; PAP2 Superfamily; PAP2 Domain-Containing Protein; Integral Membrane Protein; Phosphatidylglycerophosphatase; Transmembrane Acid Phosphatase; Phosphoesterase
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTENARPAWAARNLAEHERAGERIVVRHSHNWRMAPSHAMLVGLVCWAGFAVVVFLVVTGRGGAFDDAGLRIWRAASDLS LPRGPEWLVEAVRDLTALGGTLLRNIFAVAAVIALLFLRLRREAFLFAATVSSGWIVEFALKVAVGRPRPVIVPHLMGAG GNSFPSGHSFNSAVVYIAMALAFASLSSRAKVRATIIGAAIMGTLLVAVSRVWLGVHYPTDVIAGWLGGAGWAFSASALL YKPAKVVANGTFNQ
Sequences:
>Translated_254_residues MTENARPAWAARNLAEHERAGERIVVRHSHNWRMAPSHAMLVGLVCWAGFAVVVFLVVTGRGGAFDDAGLRIWRAASDLS LPRGPEWLVEAVRDLTALGGTLLRNIFAVAAVIALLFLRLRREAFLFAATVSSGWIVEFALKVAVGRPRPVIVPHLMGAG GNSFPSGHSFNSAVVYIAMALAFASLSSRAKVRATIIGAAIMGTLLVAVSRVWLGVHYPTDVIAGWLGGAGWAFSASALL YKPAKVVANGTFNQ >Mature_253_residues TENARPAWAARNLAEHERAGERIVVRHSHNWRMAPSHAMLVGLVCWAGFAVVVFLVVTGRGGAFDDAGLRIWRAASDLSL PRGPEWLVEAVRDLTALGGTLLRNIFAVAAVIALLFLRLRREAFLFAATVSSGWIVEFALKVAVGRPRPVIVPHLMGAGG NSFPSGHSFNSAVVYIAMALAFASLSSRAKVRATIIGAAIMGTLLVAVSRVWLGVHYPTDVIAGWLGGAGWAFSASALLY KPAKVVANGTFNQ
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27108; Mature: 26977
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENARPAWAARNLAEHERAGERIVVRHSHNWRMAPSHAMLVGLVCWAGFAVVVFLVVTG CCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RGGAFDDAGLRIWRAASDLSLPRGPEWLVEAVRDLTALGGTLLRNIFAVAAVIALLFLRL CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RREAFLFAATVSSGWIVEFALKVAVGRPRPVIVPHLMGAGGNSFPSGHSFNSAVVYIAMA HHHHHEEEEECCCCHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCCCCCHHHHHHHHH LAFASLSSRAKVRATIIGAAIMGTLLVAVSRVWLGVHYPTDVIAGWLGGAGWAFSASALL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCHHHH YKPAKVVANGTFNQ CCCHHHEECCCCCC >Mature Secondary Structure TENARPAWAARNLAEHERAGERIVVRHSHNWRMAPSHAMLVGLVCWAGFAVVVFLVVTG CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RGGAFDDAGLRIWRAASDLSLPRGPEWLVEAVRDLTALGGTLLRNIFAVAAVIALLFLRL CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RREAFLFAATVSSGWIVEFALKVAVGRPRPVIVPHLMGAGGNSFPSGHSFNSAVVYIAMA HHHHHEEEEECCCCHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCCCCCHHHHHHHHH LAFASLSSRAKVRATIIGAAIMGTLLVAVSRVWLGVHYPTDVIAGWLGGAGWAFSASALL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCHHHH YKPAKVVANGTFNQ CCCHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA