| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is mas [H]
Identifier: 87200463
GI number: 87200463
Start: 2639757
End: 2640728
Strand: Reverse
Name: mas [H]
Synonym: Saro_2450
Alternate gene names: 87200463
Gene position: 2640728-2639757 (Counterclockwise)
Preceding gene: 87200464
Following gene: 87200461
Centisome position: 74.14
GC content: 66.77
Gene sequence:
>972_bases ATGAAGCAGTTCGCGCTTGCCGAACTGGTGGGGGCGGCCAGCGGCCGTATCGTGGATACCGCCCTGCCGCAGCCCGCATC GGGCGAGGTCCGAGTGCGGGTCGAGGCGGTTGGTCTCGGCTTTGTCGATGATCTCATTGTTTCAGGCCGCTACCAATGGA AGCCGCAATTGCCGTTCGTGCCGGGGGGCGAAATCGTCGGTACGGTTGAGGCAGTTGGGGAAGGCGTACAGGGCCTGACC ACTGGTACCCGCGTGGCGGCATGGCGCATGGGCGGTGGGCTTTGCGAATATTGCACGCTCCCGGCCGGATATCTCGTCCC CGTTCCGGCCCCGCTTGCGTCGGCAGATGCAGCCGGGATGGTGCTCGACTATGCCACGGCGGACTATGCCCTCATCGGCA GGGGCCAATTGCGCAAGGGCGACACCGTCTTCGTGCTAGGGGCAACGGGCGGCGTGGGCGGCGCGGCAGTCCGCATCGCG AGAGCGGCAGGCGCAGAAGTCATCGCTGGCGTCTCGAACCTGTCGCAGGGCGATAAAGTGCTCGCCGATGGCGCTAGTGC AGTCGTCGACTGCTCGGCTCCGGACTGGCGCGACCAACTGCGTGGACACCCGCTCGATCTGGTTTTCGATCCCTTGGGTG GCGCATTCACCGAACCCGCCTTCCGTTCGCTCGGAAAGCTGGGGCGGCATCTCGTGGTGGGCTTCGCTGCGGGCGGTATC CCGGCATTGCCGGTCAATCTTCCCCTCCTCAAGAGCGCATCGCTCGTCGGCGTCGATGTGCGCTTTTTTGCCGAGTCTGA TCCGGAGGGGTTCCGGCAGCGGCTCGCGCTGGTCTTCGATCAGGCGGCACGCGGGAGCCTGCGGCCCCCGGAAACGCTCT GCTTCAGCCTTGGCGAGGCCGCCGCCGCCTTTGCCGCACTCACCCGACGCGGCCGGGGCGGCAAAGTGGTCGTCTGCCCG CAATTGTCCTGA
Upstream 100 bases:
>100_bases AACTGCCTCAGATGCAGGTCGACACGGGCGGTGCTTGCTGGCGCGAGAATTTCCTGTTCCGTGGCCTGACCGGCCTTGAA GCCAGGTGGCCCGCGCAGGC
Downstream 100 bases:
>100_bases ACCGGCTGTCGAGTGCCCGCAACGTGGCGTGTTCGATCCCTGCTCAGAGCACCAGCATCGCCGAACCCAGCGCCATGAAG AAGCTGACCACCGTCGCGAC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKQFALAELVGAASGRIVDTALPQPASGEVRVRVEAVGLGFVDDLIVSGRYQWKPQLPFVPGGEIVGTVEAVGEGVQGLT TGTRVAAWRMGGGLCEYCTLPAGYLVPVPAPLASADAAGMVLDYATADYALIGRGQLRKGDTVFVLGATGGVGGAAVRIA RAAGAEVIAGVSNLSQGDKVLADGASAVVDCSAPDWRDQLRGHPLDLVFDPLGGAFTEPAFRSLGKLGRHLVVGFAAGGI PALPVNLPLLKSASLVGVDVRFFAESDPEGFRQRLALVFDQAARGSLRPPETLCFSLGEAAAAFAALTRRGRGGKVVVCP QLS
Sequences:
>Translated_323_residues MKQFALAELVGAASGRIVDTALPQPASGEVRVRVEAVGLGFVDDLIVSGRYQWKPQLPFVPGGEIVGTVEAVGEGVQGLT TGTRVAAWRMGGGLCEYCTLPAGYLVPVPAPLASADAAGMVLDYATADYALIGRGQLRKGDTVFVLGATGGVGGAAVRIA RAAGAEVIAGVSNLSQGDKVLADGASAVVDCSAPDWRDQLRGHPLDLVFDPLGGAFTEPAFRSLGKLGRHLVVGFAAGGI PALPVNLPLLKSASLVGVDVRFFAESDPEGFRQRLALVFDQAARGSLRPPETLCFSLGEAAAAFAALTRRGRGGKVVVCP QLS >Mature_323_residues MKQFALAELVGAASGRIVDTALPQPASGEVRVRVEAVGLGFVDDLIVSGRYQWKPQLPFVPGGEIVGTVEAVGEGVQGLT TGTRVAAWRMGGGLCEYCTLPAGYLVPVPAPLASADAAGMVLDYATADYALIGRGQLRKGDTVFVLGATGGVGGAAVRIA RAAGAEVIAGVSNLSQGDKVLADGASAVVDCSAPDWRDQLRGHPLDLVFDPLGGAFTEPAFRSLGKLGRHLVVGFAAGGI PALPVNLPLLKSASLVGVDVRFFAESDPEGFRQRLALVFDQAARGSLRPPETLCFSLGEAAAAFAALTRRGRGGKVVVCP QLS
Specific function: Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=307, Percent_Identity=30.9446254071661, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI13236495, Length=307, Percent_Identity=30.9446254071661, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI18379349, Length=211, Percent_Identity=32.2274881516588, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI24308257, Length=237, Percent_Identity=29.1139240506329, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI194239676, Length=185, Percent_Identity=35.1351351351351, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI22538446, Length=318, Percent_Identity=28.6163522012579, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI22538444, Length=318, Percent_Identity=28.6163522012579, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI28557745, Length=291, Percent_Identity=27.8350515463918, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI67078404, Length=295, Percent_Identity=26.4406779661017, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI41872631, Length=305, Percent_Identity=26.5573770491803, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI67078406, Length=280, Percent_Identity=26.4285714285714, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1790485, Length=232, Percent_Identity=29.3103448275862, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787863, Length=233, Percent_Identity=27.8969957081545, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17507255, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=318, Percent_Identity=24.2138364779874, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI19920632, Length=249, Percent_Identity=26.5060240963855, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI221330659, Length=249, Percent_Identity=26.5060240963855, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24581345, Length=252, Percent_Identity=27.3809523809524, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550423, Length=245, Percent_Identity=28.1632653061224, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR013968 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00107 ADH_zinc_N; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: =2.3.1.111 [H]
Molecular weight: Translated: 33146; Mature: 33146
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFALAELVGAASGRIVDTALPQPASGEVRVRVEAVGLGFVDDLIVSGRYQWKPQLPFV CCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEEECCCHHHHHHHCCCEECCCCCCCC PGGEIVGTVEAVGEGVQGLTTGTRVAAWRMGGGLCEYCTLPAGYLVPVPAPLASADAAGM CCCCEEEEHHHHCCCCCCCCCCCEEEEEECCCCEEHHHHCCCCCEEECCCCCCCCCCCCE VLDYATADYALIGRGQLRKGDTVFVLGATGGVGGAAVRIARAAGAEVIAGVSNLSQGDKV EEEECCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEE LADGASAVVDCSAPDWRDQLRGHPLDLVFDPLGGAFTEPAFRSLGKLGRHLVVGFAAGGI EECCCCEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCC PALPVNLPLLKSASLVGVDVRFFAESDPEGFRQRLALVFDQAARGSLRPPETLCFSLGEA CCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAAFAALTRRGRGGKVVVCPQLS HHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure MKQFALAELVGAASGRIVDTALPQPASGEVRVRVEAVGLGFVDDLIVSGRYQWKPQLPFV CCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEEECCCHHHHHHHCCCEECCCCCCCC PGGEIVGTVEAVGEGVQGLTTGTRVAAWRMGGGLCEYCTLPAGYLVPVPAPLASADAAGM CCCCEEEEHHHHCCCCCCCCCCCEEEEEECCCCEEHHHHCCCCCEEECCCCCCCCCCCCE VLDYATADYALIGRGQLRKGDTVFVLGATGGVGGAAVRIARAAGAEVIAGVSNLSQGDKV EEEECCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEE LADGASAVVDCSAPDWRDQLRGHPLDLVFDPLGGAFTEPAFRSLGKLGRHLVVGFAAGGI EECCCCEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCC PALPVNLPLLKSASLVGVDVRFFAESDPEGFRQRLALVFDQAARGSLRPPETLCFSLGEA CCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAAFAALTRRGRGGKVVVCPQLS HHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1527058; 12788972 [H]