Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200434

Identifier: 87200434

GI number: 87200434

Start: 2600398

End: 2602707

Strand: Direct

Name: 87200434

Synonym: Saro_2421

Alternate gene names: NA

Gene position: 2600398-2602707 (Clockwise)

Preceding gene: 87200433

Following gene: 87200435

Centisome position: 73.01

GC content: 68.14

Gene sequence:

>2310_bases
ATGATCCGCCTGTCGCGTCGCGGACTGATGGCCGGGGCGGGCGCGCTGGGCCTGTCAGCGACCTTGCGCCCGGCAAGCGC
CGCTGCCAGCCCGGAAGCGGCGCCGCCGAACCTGTTCATCGGCACCGGCGGCGATGGCCACACCTTCCCCGGAGCATCGC
TGCCCTTCGGCATGGTCCAGCTTTCGCCCGATACAGACACCGCGCGCTGGGACACCTGCTCGGGCTATCACCACGGCGAT
GCCTCGCTGCTGGGTTTCTCGCACACGCACCTGTCGGGCACCGGCATCGGCGACATGCTCGACGTTCTGGTCGTCCCTTG
TCGCGGCCCCGTTCTGCTCCAGCCAGGAGCGCTCGACCGACCGGACGAAGGCTACCGCCTGCGCTATTCCGACGAGCTGG
CCGAGCCCGGCTATTACCGCGTCGCGCTGGAAAACGGCGTCCTGGCCGAGCTGACCGTGACGCGCCGCACCGGCATCCAC
CGCTATACCTTCCCGCAAGGTCCAGCACACCTCCTGGTCGACCTGTCGCACCTCGTGATGGAGGGCCCCGGCGAGGCCCC
GCTGATCGACGAGGCGCTGCTCGCGCTGGATGAGGACGGCACGCTTTCCGGCACGCGCCGGGTCCACCGCTGGGCCAAGG
GCCGACGCTGCTTCTTTGCCATGCAGTTCTCGCGCGCACCGGACCGCGTGGAGTTCTTCACCGACGGCGATGTTCCGGTT
CCGGGCATGGCGGCAACCGGCAAGCGGCTGAAGGCCGTGCTGCATTACGACGATGCCGGGGCGGCCCCGCTCGTCGTGCG
CTGCGGCATCTCCGCCGTGGACGCACAGGGCGCGCGCGCCAATCTTGCGGCCGAGGCGAAGCACTGGAACTTCGACCGCT
ACCGCAAGAATGCCATGCGCGTCTGGTCGCGCGAACTTTCACGCATCCGCGTGGAAGGCGGCAGCACGGACGAGCGCACG
GTCATGGCGACAGCGCTCTATCACGCCAGCCTCGGCCCGACGCTGTTCTCCGACGTCGATGGCCGCTACGTCGGGCTGGA
CCGCCAGGTCCACAAGCTGGCGCGCGGCGAGGAAAGCTATACCGCCTATTCGTTGTGGGACACCTACCGCGCGTTCCATC
CCTTGCAGACGCTGATCCGCCCCGCGCTCGGCGCCACCTTCGCCGCCGATCTCGTGCGGCAGACGCAACAGAGCCCGTTC
GGTCCGCCGGTATGGCCGCTGCAGGGGGTTGAAACCGGCTGCATGATCGCCTGGCACAGCGTCTCGGTCCTCGCCGAATC
CCGAGCCAAGGGCATTCCGGCCGACTACGCCGCCGCATGGCCCGGGATCGAACGTCGGCTGTTCGACTGGACCACGCCCA
ATCTCGACAACAGCCACGGGCTGCGCATCTATGACGAGACCGGCTTCATTCCCGCCGACCAGATCTTCGAATCCGTCTCG
CGCGTGCTCGAATACAGCTACGACGACCACGCCGCCGCGCAGATCGCCGATGCCGCAGGCGCCACCGCGCGCGCGGACAG
GCTGCGCGAGCGCAGCGGCAACTGGCGCAACGTGTTCGACCCGGCCACCGGCTTTGTTCGCCCGCGTCTGGCCGATGGCT
CGTGGGCCGAACCCTTTGCGCCCAACGGCGTCGGCCATTCGTCGCGCTGGCGCGATTTCACCGAGAGCAATTCCTGGCAG
GCGACGTTCCTCAACCAGCATGACGTTCCCGGCCTGATCGCGGCAATGGGCGGGGATGCCGCTTTCGAGGCAAAGCTCGA
CGCGCTGTTCACCGCTGATTCCACCCTGCCCGAAGGCGCGCCGCCCGATATCTCGGGGCTTGTCGGGCAGTACGCCCACG
GCAACGAGCCGAGCCATCACGTCGCATATCTCTATGCCTATTGTGGCGCGGCGTGGAAGACGCAGGCCATGGTGCGCCGT
CTCATGGCGGAGATGTACCATGCCCGGCCCGCCGGGATCATCGGTAACGACGATTGCGGTCAGATGAGCGCATGGTTCAT
CCTCTCCGCCCTGGGCTTCTACCCGGTCGACCCGGTAAGCGCGACCTACGTGCTTGGCAGCCCGCTGTTCGAACGCGCAG
AGGTCGAACTCGGCAAGGGGCGCAAGCTGGTGATCGAGGCGCCCGGCAACCGGGCCAGCACGCCCTATGTCCAGTCCGTG
GCGTGGAACGGCGGGCCCTGGGCAAAAGGGTGGATTGCCCATGCCGATCTCGTCCGTGGCGGCACCTTGCGCTTCGAGAT
GAGCGGCACGCCGAACAAGGACTTTGCGCGCCTGCCCGAACACCGCCCCAGCCGCACGCAAGCGGCATGA

Upstream 100 bases:

>100_bases
CGAAGTTCACCCGCCACTGGTTCGCCTGGGCCAACGGCCTGTTCGGAGAGCTGATGATAGACCTCGCCAACCGCAAGCCG
GCATTGCTGGGAGAAGCCGC

Downstream 100 bases:

>100_bases
TCGCCGGCGCCGCACTTGCGCTGGCGGTTGCTGCGGTGCTTCCTGCGCCGCTCGATCTGGCGCGGCCGTGCACCGCGGGT
GAAGCCGTGGCCTCGGACCT

Product: alpha-1,2-mannosidase

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MIRLSRRGLMAGAGALGLSATLRPASAAASPEAAPPNLFIGTGGDGHTFPGASLPFGMVQLSPDTDTARWDTCSGYHHGD
ASLLGFSHTHLSGTGIGDMLDVLVVPCRGPVLLQPGALDRPDEGYRLRYSDELAEPGYYRVALENGVLAELTVTRRTGIH
RYTFPQGPAHLLVDLSHLVMEGPGEAPLIDEALLALDEDGTLSGTRRVHRWAKGRRCFFAMQFSRAPDRVEFFTDGDVPV
PGMAATGKRLKAVLHYDDAGAAPLVVRCGISAVDAQGARANLAAEAKHWNFDRYRKNAMRVWSRELSRIRVEGGSTDERT
VMATALYHASLGPTLFSDVDGRYVGLDRQVHKLARGEESYTAYSLWDTYRAFHPLQTLIRPALGATFAADLVRQTQQSPF
GPPVWPLQGVETGCMIAWHSVSVLAESRAKGIPADYAAAWPGIERRLFDWTTPNLDNSHGLRIYDETGFIPADQIFESVS
RVLEYSYDDHAAAQIADAAGATARADRLRERSGNWRNVFDPATGFVRPRLADGSWAEPFAPNGVGHSSRWRDFTESNSWQ
ATFLNQHDVPGLIAAMGGDAAFEAKLDALFTADSTLPEGAPPDISGLVGQYAHGNEPSHHVAYLYAYCGAAWKTQAMVRR
LMAEMYHARPAGIIGNDDCGQMSAWFILSALGFYPVDPVSATYVLGSPLFERAEVELGKGRKLVIEAPGNRASTPYVQSV
AWNGGPWAKGWIAHADLVRGGTLRFEMSGTPNKDFARLPEHRPSRTQAA

Sequences:

>Translated_769_residues
MIRLSRRGLMAGAGALGLSATLRPASAAASPEAAPPNLFIGTGGDGHTFPGASLPFGMVQLSPDTDTARWDTCSGYHHGD
ASLLGFSHTHLSGTGIGDMLDVLVVPCRGPVLLQPGALDRPDEGYRLRYSDELAEPGYYRVALENGVLAELTVTRRTGIH
RYTFPQGPAHLLVDLSHLVMEGPGEAPLIDEALLALDEDGTLSGTRRVHRWAKGRRCFFAMQFSRAPDRVEFFTDGDVPV
PGMAATGKRLKAVLHYDDAGAAPLVVRCGISAVDAQGARANLAAEAKHWNFDRYRKNAMRVWSRELSRIRVEGGSTDERT
VMATALYHASLGPTLFSDVDGRYVGLDRQVHKLARGEESYTAYSLWDTYRAFHPLQTLIRPALGATFAADLVRQTQQSPF
GPPVWPLQGVETGCMIAWHSVSVLAESRAKGIPADYAAAWPGIERRLFDWTTPNLDNSHGLRIYDETGFIPADQIFESVS
RVLEYSYDDHAAAQIADAAGATARADRLRERSGNWRNVFDPATGFVRPRLADGSWAEPFAPNGVGHSSRWRDFTESNSWQ
ATFLNQHDVPGLIAAMGGDAAFEAKLDALFTADSTLPEGAPPDISGLVGQYAHGNEPSHHVAYLYAYCGAAWKTQAMVRR
LMAEMYHARPAGIIGNDDCGQMSAWFILSALGFYPVDPVSATYVLGSPLFERAEVELGKGRKLVIEAPGNRASTPYVQSV
AWNGGPWAKGWIAHADLVRGGTLRFEMSGTPNKDFARLPEHRPSRTQAA
>Mature_769_residues
MIRLSRRGLMAGAGALGLSATLRPASAAASPEAAPPNLFIGTGGDGHTFPGASLPFGMVQLSPDTDTARWDTCSGYHHGD
ASLLGFSHTHLSGTGIGDMLDVLVVPCRGPVLLQPGALDRPDEGYRLRYSDELAEPGYYRVALENGVLAELTVTRRTGIH
RYTFPQGPAHLLVDLSHLVMEGPGEAPLIDEALLALDEDGTLSGTRRVHRWAKGRRCFFAMQFSRAPDRVEFFTDGDVPV
PGMAATGKRLKAVLHYDDAGAAPLVVRCGISAVDAQGARANLAAEAKHWNFDRYRKNAMRVWSRELSRIRVEGGSTDERT
VMATALYHASLGPTLFSDVDGRYVGLDRQVHKLARGEESYTAYSLWDTYRAFHPLQTLIRPALGATFAADLVRQTQQSPF
GPPVWPLQGVETGCMIAWHSVSVLAESRAKGIPADYAAAWPGIERRLFDWTTPNLDNSHGLRIYDETGFIPADQIFESVS
RVLEYSYDDHAAAQIADAAGATARADRLRERSGNWRNVFDPATGFVRPRLADGSWAEPFAPNGVGHSSRWRDFTESNSWQ
ATFLNQHDVPGLIAAMGGDAAFEAKLDALFTADSTLPEGAPPDISGLVGQYAHGNEPSHHVAYLYAYCGAAWKTQAMVRR
LMAEMYHARPAGIIGNDDCGQMSAWFILSALGFYPVDPVSATYVLGSPLFERAEVELGKGRKLVIEAPGNRASTPYVQSV
AWNGGPWAKGWIAHADLVRGGTLRFEMSGTPNKDFARLPEHRPSRTQAA

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83607; Mature: 83607

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLSRRGLMAGAGALGLSATLRPASAAASPEAAPPNLFIGTGGDGHTFPGASLPFGMVQ
CEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
LSPDTDTARWDTCSGYHHGDASLLGFSHTHLSGTGIGDMLDVLVVPCRGPVLLQPGALDR
ECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHEECCCCCEEECCCCCCC
PDEGYRLRYSDELAEPGYYRVALENGVLAELTVTRRTGIHRYTFPQGPAHLLVDLSHLVM
CCCCCEEEECHHCCCCCEEEEEECCCCEEEEEEEHHCCCEEEECCCCHHHHHHHHHHHHH
EGPGEAPLIDEALLALDEDGTLSGTRRVHRWAKGRRCFFAMQFSRAPDRVEFFTDGDVPV
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCEEEEECCCCCC
PGMAATGKRLKAVLHYDDAGAAPLVVRCGISAVDAQGARANLAAEAKHWNFDRYRKNAMR
CCCCCCCHHEEEEEEECCCCCCCEEEECCCHHCCCCCCCCCCCHHCCCCCHHHHHHHHHH
VWSRELSRIRVEGGSTDERTVMATALYHASLGPTLFSDVDGRYVGLDRQVHKLARGEESY
HHHHHHHEEEECCCCCCCCEEEHHHHHHHHCCCHHHHCCCCCEECCCHHHHHHHCCCCCC
TAYSLWDTYRAFHPLQTLIRPALGATFAADLVRQTQQSPFGPPVWPLQGVETGCMIAWHS
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHH
VSVLAESRAKGIPADYAAAWPGIERRLFDWTTPNLDNSHGLRIYDETGFIPADQIFESVS
HHHHHHHHCCCCCCCHHHHCCCHHHHEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
RVLEYSYDDHAAAQIADAAGATARADRLRERSGNWRNVFDPATGFVRPRLADGSWAEPFA
HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PNGVGHSSRWRDFTESNSWQATFLNQHDVPGLIAAMGGDAAFEAKLDALFTADSTLPEGA
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHEEEECCCCCCCCC
PPDISGLVGQYAHGNEPSHHVAYLYAYCGAAWKTQAMVRRLMAEMYHARPAGIIGNDDCG
CCCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QMSAWFILSALGFYPVDPVSATYVLGSPLFERAEVELGKGRKLVIEAPGNRASTPYVQSV
HHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHEECCCCEEEEECCCCCCCCCCEEEE
AWNGGPWAKGWIAHADLVRGGTLRFEMSGTPNKDFARLPEHRPSRTQAA
ECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIRLSRRGLMAGAGALGLSATLRPASAAASPEAAPPNLFIGTGGDGHTFPGASLPFGMVQ
CEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
LSPDTDTARWDTCSGYHHGDASLLGFSHTHLSGTGIGDMLDVLVVPCRGPVLLQPGALDR
ECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHEECCCCCEEECCCCCCC
PDEGYRLRYSDELAEPGYYRVALENGVLAELTVTRRTGIHRYTFPQGPAHLLVDLSHLVM
CCCCCEEEECHHCCCCCEEEEEECCCCEEEEEEEHHCCCEEEECCCCHHHHHHHHHHHHH
EGPGEAPLIDEALLALDEDGTLSGTRRVHRWAKGRRCFFAMQFSRAPDRVEFFTDGDVPV
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCEEEEECCCCCC
PGMAATGKRLKAVLHYDDAGAAPLVVRCGISAVDAQGARANLAAEAKHWNFDRYRKNAMR
CCCCCCCHHEEEEEEECCCCCCCEEEECCCHHCCCCCCCCCCCHHCCCCCHHHHHHHHHH
VWSRELSRIRVEGGSTDERTVMATALYHASLGPTLFSDVDGRYVGLDRQVHKLARGEESY
HHHHHHHEEEECCCCCCCCEEEHHHHHHHHCCCHHHHCCCCCEECCCHHHHHHHCCCCCC
TAYSLWDTYRAFHPLQTLIRPALGATFAADLVRQTQQSPFGPPVWPLQGVETGCMIAWHS
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHH
VSVLAESRAKGIPADYAAAWPGIERRLFDWTTPNLDNSHGLRIYDETGFIPADQIFESVS
HHHHHHHHCCCCCCCHHHHCCCHHHHEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
RVLEYSYDDHAAAQIADAAGATARADRLRERSGNWRNVFDPATGFVRPRLADGSWAEPFA
HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PNGVGHSSRWRDFTESNSWQATFLNQHDVPGLIAAMGGDAAFEAKLDALFTADSTLPEGA
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHEEEECCCCCCCCC
PPDISGLVGQYAHGNEPSHHVAYLYAYCGAAWKTQAMVRRLMAEMYHARPAGIIGNDDCG
CCCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QMSAWFILSALGFYPVDPVSATYVLGSPLFERAEVELGKGRKLVIEAPGNRASTPYVQSV
HHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHEECCCCEEEEECCCCCCCCCCEEEE
AWNGGPWAKGWIAHADLVRGGTLRFEMSGTPNKDFARLPEHRPSRTQAA
ECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA